Gavia stellata (red-throated loon): 104252839
Help
Entry
104252839 CDS
T08384
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gste04121
]
104252839 (RBBP6)
Enzymes [BR:
gste01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104252839 (RBBP6)
Ubiquitin system [BR:
gste04121
]
Ubiquitin ligases (E3)
U-box type E3
104252839 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
104252839
NCBI-ProteinID:
XP_009812644
LinkDB
All DBs
Position
Unknown
AA seq
1547 aa
AA seq
DB search
EAYAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIR
TALLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQIQQQQQQQPP
PPPPPPPLMRQTITRNLQPLLRPTISRQQDPLMIPLASLASRSAAALSSLGPGQSPVAAG
LPVNPSSVVVSDLPPAVSLSLRGEKPDGPFRDADTVIPPAALVTAAELSKSSSLSISSLL
EEKGYQVPVLRQPALPSLLGPQGQSIPTTGHPMRASTIRSAGGRPGWELSSRGRPHSERA
QRTQAPTLPASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPP
PGYPPAPASMSSAWVPSAVPTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEF
TNDFAKELMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSR
SHSRSYSRSPPYPRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPT
KRTIPQGEGEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYK
GYAVGARPPVNRENFSPDRFGPPGTRRENSPYARGRREDYPGGQSHRNRNIAGNYPEKPS
GRESHGIKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPTAELLEGARKPREP
VTAEDVKTDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKIDKTKRKV
EVAVPPKKDNIVKPAKASQEKVDTDREKSPRPEPPVKKVKEELPKTDSVKASSSQKDEKA
LATPRKVHPKVTKDHPETRPAKEEKAKKDHPKEAKSEKPSNKEDKSKKPAEKSKPSDAKP
EKRKRKADEKVDKEHEATSVKASKPETAEAKTSPKGKTEPDGEKGERTPEKDKSAFLNNP
AKKIKLNRETGKKIVSGENVPPAKEPVEKPEPSSSKVKQEKTKGKARRKVTAADGSSSTL
VDYTSTSSTGGSPVRKPEEKPDTKRTVIKTMEEYNNDITAPAEDVIIMIQVPQSKWDKDD
FESEEEDIKSTQVPANVGKPASVIKNVSAKPPNPVKHNEKETELLEKTQKTTKEASYESS
QHDAKSSKSSMSNEKGKTKDRDHSSSDKDTSEKRKSSVQPEKDHSERATEQGNGKNISQS
SKDSRSSEKHDAGRGSTAKDFTPNRDKKSDHDGSRDHSSSKRRDEKSELARRKDSPSRNR
ESTSVQKSKPRDERAEPSKKGAGDAKRSSYSPPRERKQSDHKAAHDTKRTLEEHKPLDKN
SGKEKEKHVPEVKSNKEKEPSVNKPPLRQESPDVKTEKENVTGQNDKSVVKPKPQVSSSS
RLSSDLTRETDEAAFVPDYNESDSESNVSAKDEEAAGKNSKEPKEKAVDKAKEDTAAPAA
ADQPEANRSQSQSSPSVSRSRSQSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKKH
KKHKKHKKHIGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
4645 nt
NT seq
+upstream
nt +downstream
nt
ggaagcttatgctataggaaagaaggaaaagcctccctttttaccagaggagccgtcctc
ctcctcagaagaagatgatcccattccagatgagttgttatgtcttatttgtaaagatat
aatgactgatgcagttgttattccctgctgtggaaacagttattgtgatgaatgtattag
aacagcgttactggaatctgaggaacacacctgcccaacgtgtcatcaaacggatgtttc
tcctgatgctttaattgccaacaagttcctacgccaggctgtgaacaacttcaaaaatga
aactggctacacaaaaaggctccgtaagcagattcagcagcaacaacagcagcagccacc
accgccaccacctccaccacccctaatgagacaaacaataacacgcaacctgcagcctct
actccggccaacaatttccagacagcaggatccactgatgattccattagcttctctggc
ttctcgttctgctgctgctttgtcatcgttgggccctggtcagtcacctgtggcagctgg
gctgccggtaaatccgtcttctgtcgtcgtctctgatctccctccagcagtgtccctatc
tctccgtggtgaaaagccagatggaccttttcgtgatgctgatactgttatacctcctgc
tgctctggtgactgccgctgaactttctaaatcttcgtctctgtcaatcagcagtttgtt
ggaagagaagggctatcaggttcctgtactaagacaaccagcattaccaagtcttctggg
cccccaaggacaatcaatacccacaactggtcatccaatgagagccagtacaattcgctc
agccggtggcagaccaggctgggaactctcaagtcgaggacgcccgcacagtgaacgtgc
ccaaaggactcaggccccaacactaccagcatcagcaccagtctttgtgcctgtgcctcc
acctcccttgtatcctccaccaccccatgcacttccgcttccgccgggggtaccgccgcc
acagtttcctcctcagttcccacctgggcagcctccatctgctgggtacactgtcccccc
tccaggatatcccccagctcctgcaagcatgtcatcagcttgggtaccatcagcagtacc
aacggctcattcaaacaccatcccaacgacacaagcacctcctttgtctagggaggagtt
ttacagagagcaacggagacttaaagaggaggaaaagaaaaagtccaaacttgatgagtt
tacaaatgattttgctaaggaattgatggaatataaaaagattcaaaaggagcgtaggcg
ttcgttttccaggtccaagtctccctatagtgcttcatcttactctagaagttcatacac
ctactccaagtcaagatcaggttcttcccgctctcgctcctactcgcgatcatttagtcg
ttcccattctcgttcctactcacgatcgccaccgtatccaagaagaggcaaagggaagag
tcgtaactatcgttctaggtcaaggtcacatggttatcaccgttctaggtcaaggtcacc
cccatacagaagataccattcgcggtcaaggtctccagtatttagaggccagtctcccac
taaacggactatacctcaaggggaaggagaaagggagtattttaacagatacagagaagt
tccaccatatgatatgaaagcttactatggcagatctgttgactttagagatccatttga
aaaggagagatacagagaatgggaaaggaactatagagaatggtacgaaaagttttacaa
gggctatgctgttggtgctcgacctccggtaaacagagagaacttttctcctgataggtt
tggtccacctgggaccagacgagagaattcgccatacgctcggggacgtagggaggatta
tcctggtgggcagagccaccgaaaccgtaatatagctggaaattaccctgaaaaaccatc
tggaagagagagccatggcatcaaagatcctacaaaatcaaaagagaaggaggtggagaa
tccactgggagatggcaaaggaaataaacataaaaaacaccggaagagaagaaaagggga
tgagaatgaaggatttcccactgctgagttgttagaaggtgcgagaaagccaagagagcc
agttacagcggaagacgttaaaacggactctctgttcatgctcccaagcagagatgatgc
cacccctgtgagagatgagcctatggaagcagattctattgctttcaaaccagtgtctga
aaaggagaaaaaagagaaggataagccaaaagcaaaaatcgacaagacaaagcggaaagt
agaagtggctgttcctcccaagaaagacaatatagttaaaccagctaaagcttcccaaga
gaaggtggacactgatcgcgaaaaatctcctcgaccagaacctcctgtgaaaaaagtgaa
ggaggagttgccaaagacagacagtgttaaagcatcttcctctcaaaaggatgagaaggc
tcttgctaccccacggaaagttcacccaaaagtgacaaaagatcacccagaaaccagacc
agccaaggaggaaaaggcaaagaaagaccatccgaaagaagccaagtcggagaagccctc
caacaaagaggacaaatcaaaaaaacctgctgaaaaaagcaaaccttctgatgcaaaacc
tgagaaaagaaaaagaaaagcagatgaaaaggttgataaagaacatgaagccacttccgt
aaaggcctctaaaccagaaaccgctgaagcgaaaacatcaccgaaggggaagactgagcc
tgatggtgaaaaaggagagcgaactccagaaaaggataaatctgcttttcttaacaaccc
tgcaaaaaagattaaacttaaccgagaaactggcaaaaagattgtgagtggagaaaatgt
gccacctgcaaaagaacccgttgagaaacccgagccaagcagcagcaaagttaaacaaga
aaaaacgaagggaaaagcgagaagaaaagtaacagcagctgatggatctagttcaacact
tgtagattacaccagcactagttctactggaggaagccccgttagaaagcctgaagaaaa
gccagatacaaaacgaactgtcattaagaccatggaggagtataacaatgatataacagc
ccctgctgaagatgtcattattatgatccaggtccctcagtcaaagtgggataaagatga
ctttgagtctgaagaagaagacattaaatctacccaggtgcctgcaaatgtaggaaaacc
tgctagtgttataaaaaatgtgagtgctaagccaccaaaccctgtaaaacacaacgaaaa
agagacggagcttttggagaaaacacagaaaactacaaaagaggcaagttatgaaagctc
ccagcacgatgcaaaaagttcaaaaagttctatgtcgaatgaaaaaggaaaaaccaaaga
ccgggatcattcttcgtcagacaaggacacttctgagaagaggaagagcagtgttcagcc
agaaaaagaccactcggaacgtgcaactgagcaaggaaatggaaaaaatatttctcaatc
ttccaaagacagcagatcttcagagaaacatgatgctggtcgtggatccactgctaaaga
cttcactcctaaccgagacaaaaaatctgaccatgatggcagcagagatcactctagttc
caagcgtagagatgaaaagagtgaattagcaaggagaaaagactccccttctcgaaacag
agaatctacatcagtacagaaaagtaagccaagagatgaacgagcagagccgtccaaaaa
gggtgctggcgatgccaaaaggagcagttacagtcctccacgtgagcggaagcagtctga
tcacaaagctgctcatgataccaagcgtacgttggaggaacacaaacctctagataaaaa
ttcaggaaaagagaaagagaagcatgtaccagaagtaaagagcaataaagagaaagagcc
aagtgttaataaaccacctttgagacaggaatcaccagatgtaaaaaccgagaaagagaa
cgtgactggacaaaacgataaaagtgttgtcaagcccaagcctcaggtaagcagctcctc
acggctctcttctgatctaacccgagagactgatgaggctgcgtttgtaccagactacaa
cgaaagtgacagtgagagtaatgtttctgcaaaagatgaggaagctgcaggaaaaaattc
taaagaaccgaaagaaaaggctgttgataaggcgaaagaggatacggcagcacctgctgc
agctgaccagcctgaagcaaaccgaagtcaaagtcaaagcagtcccagcgttagccgcag
ccgtagtcaaagcccttctgagagtcagactcgaagccacagcagcagtgccagctcagg
agagagtcaagacagcaagaaaaagaaaaagaagaaagagaagaagaagcacaagaagca
taagaaacacaagaagcataagaaacatattggaaatgaaacggaattggaaaagagcca
aaaacacaaacacaagaagaaaaaatcgaagaagagcaaagataaagagaaagatgacca
aaaagtgaaatctgtcactacatag
DBGET
integrated database retrieval system
