Gavia stellata (red-throated loon): 104252894
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Entry
104252894 CDS
T08384
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104252894 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gste01001
]
104252894 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gste04054
]
104252894 (CIITA)
Enzymes [BR:
gste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104252894 (CIITA)
Protein kinases [BR:
gste01001
]
Serine/threonine kinases: Other
TAF1 family
104252894 (CIITA)
Pattern recognition receptors [BR:
gste04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104252894 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
NB-ARC
nSTAND_NTPase5
NPHP3_N
RsgA_GTPase
nSTAND3
ATPase_2
AAA
AAA_22
Motif
Other DBs
NCBI-GeneID:
104252894
NCBI-ProteinID:
XP_009817763
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
VEQLQQKGLRVPLAVAEQPRDHTAGLRKHRPEAPEKEGDSKRQIMDSAFVSENGYLDLLH
SDIDPLHLYTLLDPKSSGNEEGNFSADPEVDASNYDQFNNMDFLCTIENGENGDELYLCS
NTIEAYARIAELAEYVLKDQQEKQVEDTFAGNLILDEMAAENTEKFTDIKMQKCHKRTFL
GSAESCSDASEPKYKKIVEVPAVSAGNGSFLAMPLNSHPASSTSLTNQHISFSVPATNAL
ERSFVIPGSSAPLIPECLPVSVKGSQENTGFADPPQQILNFVLGNGTSDVIIYPVLTSAT
KTLIAPSFPVSLCGLEMFKEVQVPIIPPEEPFKRPKPVEAFCTSLMDYFRDVCKSVAMER
EVTLDHLFIDGTFVQSQTETKTGKNNVKAMEKELVTCSLQGKENAALKISQIFQILGGKD
LETKVIVVLGKEGMGKSILVQKICQDWSNGEFSQFEFVFWFDCKQISLPEKRYSLKDLLL
EFFVKPQEGSKEIFEYILQNPAKVLLVFDGFEGLHDHENFPRCSASQPEKDLCSIKELLS
GLIQKKILNGCTLLLTARPKDKVYQYVSKVDKTIEIVGFSPQQRELYITKYFKGLPYCAN
ALKLIKDSEYLFSHCYSPVMCRFICFLCEKVLEIGDKSLPSTLTTVFLKFVQQKIIPMQT
DVTAMQNQESLAMLARIAWYLGEKHQSAMKSDLPSKEVKEFALKYGFFLPFAFPRHSGSE
EEEFGSTFSDFVIQNFLGALHLMLAEEIKDKSLTKYLSFPSKKKKPYNWLDLVPRFLAGL
LFLQDDPYFCSLSNKDVKQSTKKQKTLLKYIRRLQINELCPERLLELLHCIYETQSNYLL
QHVALRLKPDLSFLGVLLTPPDVHVLHSILKRSRKEFSLDLRNTSIDMQGLKDLVGLKNV
ASFRASLSDTVRLWKSLEQTKDCELLRASTEKFVLDPFKAKTMKDVSDLSDLVEMQEKMI
NCVQDASGCSTYEIPAIKNLRKLEFALGPVCGLQGFLKLVEILAAFPSLQHLE
NT seq
3043 nt
NT seq
+upstream
nt +downstream
nt
ggtagagcagcttcagcagaagggtttgagagttccccttgccgtggcagagcagcccag
agaccacactgcaggactgcggaaacacagacctgaagctcctgaaaaagaaggcgacag
caagagacaaatcatggattcagcatttgtgtctgaaaatggctatcttgatttgctgca
cagtgatatcgatccattgcatctgtatactctccttgatcctaagtcatctggaaatga
agaaggtaacttctctgcagatcctgaagttgatgccagcaactatgatcaattcaataa
tatggatttcctgtgtacaattgaaaatggtgaaaatggggatgaattgtatctctgttc
caacaccatagaagcttatgctagaatagctgaattagcagaatatgtcctcaaagatca
gcaggagaagcaggtggaagacacttttgcagggaaccttattttggatgaaatggctgc
tgaaaacactgagaaatttactgacataaaaatgcagaaatgtcacaaacgaaccttctt
aggctctgcagagagttgctctgatgcttcagaacccaaatacaagaaaattgtggaagt
ccctgcagtgtctgcagggaatggcagtttcttagctatgcctctcaacagccatccggc
tagctccacctcactaacaaaccagcacatatccttttctgttcctgctaccaacgcatt
ggaaagaagttttgtaattcctggatcttcagcacctttgattccagagtgtctacctgt
cagtgtgaaagggagccaagagaatacaggctttgcagatcctcctcagcagatacttaa
ctttgttcttggaaatggcacatctgatgttataatatatccagtgctgacttctgccac
gaaaacattgatagccccaagttttcccgttagtttatgtggtttagaaatgttcaaaga
agtccaagttcccataattccgcctgaagaacctttcaaaagaccaaagccagtggaagc
tttctgtacatcacttatggattatttccgagacgtgtgcaaatccgtggccatggagcg
tgaagtaactcttgatcacctgtttattgatgggacatttgttcaaagccaaactgaaac
caagactgggaaaaataacgtaaaagcaatggaaaaggagctggtaacttgcagtctgca
agggaaggaaaatgcagcccttaaaataagccaaatatttcaaatcctgggaggtaaaga
cttagagactaaagtgattgtggtgctgggaaaagaaggaatgggcaaaagcattcttgt
tcagaagatctgccaggactggtccaatggagagttttctcaatttgaatttgtattttg
gtttgactgcaaacaaataagcttgcctgagaagcgatacagcttgaaggatctgcttct
tgaattttttgtaaaacctcaagagggaagcaaagagatctttgagtacatattgcaaaa
tcctgctaaagtccttctggtttttgatgggtttgaagggttgcatgatcatgagaattt
tcctcgttgctcagccagccagcctgaaaaagacttgtgcagtataaaggagctgctttc
aggactcatccaaaaaaagatactcaatggttgtactttattacttacagcaagaccaaa
agacaaggtgtaccagtatgtatccaaagtggataagactattgaaatagtaggattttc
ccctcagcagagagaattgtacataaccaaatacttcaaaggattaccctactgtgctaa
tgcactgaaattaatcaaagactctgagtacttgttcagtcattgttacagccctgttat
gtgtagatttatttgctttctctgtgagaaggtacttgaaataggagacaaaagccttcc
ttcaactcttactacagtcttcctgaaatttgttcagcaaaagataatacctatgcaaac
agatgttacagccatgcaaaatcaagagagtcttgctatgctagcccgtatagcctggta
tcttggagaaaagcaccaaagtgcaatgaaaagtgatcttccttctaaggaagttaaaga
gtttgctctgaaatatggatttttcctgccatttgcattccccagacattcaggtagtga
agaagaggaatttgggagcacattctctgattttgtcattcagaatttcttgggtgcgct
tcaccttatgttagcagaagagatcaaggataaaagtctaacaaagtacctgtcttttcc
atccaagaagaaaaaaccttataactggttagatttagtgcctcgatttttggctggctt
gttgttcctccaggatgacccctacttctgttccctttcaaataaggatgtaaaacaatc
aaccaagaagcagaaaacactcttgaaatatattagaaggctgcagataaatgagctctg
tccagagaggttacttgagcttttacattgtatttatgaaacgcaaagcaattatctttt
gcagcatgtggctttaaggctcaagccagacctgtcttttctgggcgtacttcttacacc
acctgatgtccatgtgctgcactctattttaaaaaggtcaagaaaagagttttctttgga
tttgcgaaacaccagcattgacatgcaagggctgaaggacttggttggcctaaagaatgt
ggcatcgttcagggcctccctcagtgatacagtcaggctctggaaatctttagaacagac
aaaagactgcgaactgctgagagcatcaacagagaaatttgttcttgatccctttaaggc
aaagacaatgaaggacgtcagtgacctttcagatcttgtagagatgcaggagaagatgat
caattgtgtgcaagatgcatctggttgcagcacctatgaaattcctgccatcaaaaacct
cagaaaactggaatttgcgctgggtccagtatgtggccttcagggattcttaaaactcgt
ggaaattcttgcagcatttccatcacttcagcatttagagtga
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