Gavia stellata (red-throated loon): 104252927
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Entry
104252927 CDS
T08384
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04137
Mitophagy - animal
gste04140
Autophagy - animal
gste04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104252927 (HIF1A)
04137 Mitophagy - animal
104252927 (HIF1A)
04148 Efferocytosis
104252927 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gste03000
]
104252927 (HIF1A)
Transcription factors [BR:
gste03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104252927 (HIF1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
104252927
NCBI-ProteinID:
XP_009816078
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
ISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLTISYLRMRKL
LDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMGLTQFELTGHSV
FDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVNIKSATWKVL
HCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKF
SYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQG
GYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECMLKPVESPDMKMT
KIFGKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDEQQCDEVPLYNDV
MLPSSSEKLQNISMAMSPLPASETTKPLRSNADPALNREVVSKLEPNTEPLELSFTMPQV
QEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMANEFKLELVEKLFAIDTEAKNPFSNQE
TDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSGSQNAATITIFQQTQTPSSTADEIKP
VTECVDDVKTLIVPSSSVHITSETSSAPASPYGGNRSRTASPIRAGKGTLDQTEKSCPGA
PSLLTVTLNKRSTAMDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIGSLFQQTGDRGGN
ASLAWKRVKGCKTNGHNGVEQKTIILLSTDIASKLLGQSMDESGLPQLTSYDCEVNAPIQ
GNRNLLQGEELLRALDQVN
NT seq
2401 nt
NT seq
+upstream
nt +downstream
nt
gattagctcagaacgcagaaaagagaagtcaagagatgcagcccggtgccgaaggagcaa
ggaatcagaagtattctatgagcttgctcatcagctgcccctgccccacaccgtgagcgc
acacctggacaaggcatccattatgagactgaccatcagctacttgcgtatgagaaagct
gctggatgctggtgagctggagacagaagccaaaatggagaaggaactgaactgtttcta
cttgaaagctcttgatggatttgtcatggttctgtctgaagatggggacatgatttacat
gtctgaaaatgtgaacaagtgtatgggactcactcagtttgagttgacggggcacagtgt
atttgatttcactcatccatgtgaccatgaagagctgagagaaatgcttacacacagaaa
tggtcctgtgaaaaagggcaaagagcaaaacacggagcgcagcttttttctcagaatgaa
gtgtacactgaccagcaggggaagaacagtgaatataaagtctgctacatggaaggtact
ccactgcactgggcacattcgtgtgtatgacacttgcggtaatcaaactcactgcggcta
caaaaagcctcccatgacgtgtctggtgttgatctgtgaacctattcctcatccatcaaa
cattgaggtccccttggacagtaaaacgttcctcagtcgtcacagtcttgatatgaaatt
ttcctattgtgatgaaagaattacagagttgatggggtatgagccagaggaactcctggg
tcgctcaatctatgaatactaccatgcgctggattctgatcatctgaccaaaacacacca
cgacatgttcacaaaagggcaggtgacaacaggacagtacagaatgcttgctaaacaagg
tggctatgtctgggttgaaactcaagcaactgttatatacaacactaagaattctcagcc
acagtgcatagtgtgcgtaaactatgtgttgagtggaattgttcagaaggacttgatttt
ttcccttggacaaactgagtgtatgctgaaaccagtggagtctcctgatatgaaaatgac
caaaatattcggcaaagatgacctggatgataccaacagcctttttgaaaaacttaaaca
ggaaccagatgctttaactgtgctggccccagctgctggagacacaattatctctctaga
tttcagcagtaatgagtctgatgaacaacaatgtgatgaagttcctttgtataatgatgt
aatgctcccctcatccagtgagaaattgcagaatataagtatggcaatgtccccactacc
tgcctctgaaactacaaagccacttcgtagcaatgctgatcctgcactcaatagagaagt
tgtatcaaagctggagccaaatacagagccacttgaactttcttttaccatgcctcaggt
gcaagagcaaccaaccagcccttctgatgcaagtaccagccaaagttcacctgagcccag
tagtcccaacgactactgctttgatgtggataatgatatggctaatgaattcaaactgga
attagtggagaaactcttcgcgatagatacagaagcaaaaaatccattctctaatcagga
aactgatttagacttggagatgttggctccttacatcccaatggatgatgacttccagtt
gcgatcctttgatcagctatctccgctggaaagcagttcttccggctctcaaaatgcagc
caccattaccatatttcagcagactcagacaccatcaagtactgctgatgaaataaaacc
agtgacagaatgtgtggatgatgtgaagacactaattgttccttcatcttctgtccacat
aaccagtgaaacgagtagtgccccagcatcaccttatggtgggaacaggagtcgaactgc
gtctccgatcagagcaggaaaaggaacattggatcagacagaaaaatcttgtccgggagc
acccagtttgctaacagtcactctgaataaaagatctactgcaatggatgaagaactaaa
tccaaagatgctagctttgcataatgctcagagaaaacgaaaaatggaacatgatggttc
actttttcaggcagttggaattgggtctttattccagcagacaggtgaccgtggaggaaa
tgcatcacttgcttggaaacgtgtaaagggatgcaaaacaaatggccataatggagtgga
gcaaaagacaatcattctactatcaactgacatagcaagtaaacttctagggcagtcgat
ggatgaaagtggactaccccaactcacgagttatgattgtgaagtaaatgctcccataca
aggcaacagaaacctgctacagggtgaagaactgctcagagctctggatcaagttaactg
a
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