Gavia stellata (red-throated loon): 104252967
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Entry
104252967 CDS
T08384
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gste03009
]
104252967
03036 Chromosome and associated proteins [BR:
gste03036
]
104252967
Enzymes [BR:
gste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104252967
Ribosome biogenesis [BR:
gste03009
]
Eukaryotic type
Pre-60S particles
Helicases
104252967
Chromosome and associated proteins [BR:
gste03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104252967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
104252967
NCBI-ProteinID:
XP_009806451
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
KEKKEKKSKRRDKSRRRKTQTDESEQSEDEADSPKLKKSRSGVKQNGAAREESPENTRLS
SLNSKSTHKKRHNNSSETSSGDGDSEQEQEMTEEQKEGAFSNFSISKGTVQLLQARGVTY
LFPVQVKTFDPVYSGKDVIAQARTGTGKTFSFAIPLIEKLQGDSQERRRGRSPKVLVLCP
TRELANQVAKDFKDITRKLTVACFYGGTPYNGQIDLMRSGIDILVGTPGRIKDHLQNGKL
DLTKVKHVVLDEVDQMLDMGFAEQVEDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKK
YMKSRYEQIDLIGKRTQKAATTVEHLAIECHWSQRAAVIGDVIQVYSGSHGRTIVFCETK
KEANELALNASIKQDCQSLHGDIPQKQREITLKGFRNGTFKVLVATNVAARGLDIPEVDL
VVQSSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEEHQLRYVEQKAGITFKRVGVPTA
TDIIKASSKDAIRCLDSVPQTAIEYFKESARLLIEDKGPVNALAAALAHISGATSIEQRS
LLNSDVGFVTMILHCSEEINNMSYAWRRLRELLGDNVDRKVNRMCFLKGKMGVCFDIPAA
DQKEIEARWEDSKQWRMCVATELPELVESQRGGGDGGNGRSFSSSRNGRRGSSGRNRFRG
RGQKRSFDRAFDR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
aaggagaaaaaagagaagaaatctaaacgccgtgacaaatctcggaggagaaagactcag
acggatgaaagtgagcagtcggaggatgaggctgattccccgaaactcaagaaatcaagg
agtggagttaagcaaaacggtgctgcaagagaggaaagcccggagaacacaagattatct
tccttaaacagtaaatccacccacaaaaaaaggcacaataattctagtgaaacgtcaagt
ggtgatggtgacagtgagcaagagcaggagatgactgaagaacagaaagagggtgctttc
tccaatttttctatttccaaagggactgttcagcttcttcaagctcgaggagtgacgtac
ctgtttcccgtgcaagtgaagaccttcgacccagtatattctggcaaagatgtaattgct
caagcacgaactggaacagggaaaacattctcttttgctattccattaattgaaaagctt
cagggagactcacaggaaagaagaaggggccgttcaccaaaggtactagttctttgtcca
acgagagagctggcaaaccaggttgccaaagatttcaaggacatcacaagaaagctaaca
gtagcttgtttttatggaggaactccatataatggacaaattgatctcatgagaagtggc
attgacattttggttgggacacctggtcgaatcaaagaccatcttcagaatggcaagctg
gaccttaccaaggtgaagcatgttgtacttgatgaagttgaccagatgctggacatggga
tttgctgagcaagtggaagacattttacgagttgcatacaagaaagattctgaagacaat
ccccagactctactgttttctgcaacttgcccacactgggtgtatgatgtggctaagaaa
tacatgaagtctagatatgaacagattgaccttattgggaaaagaactcaaaaggctgct
acaacagtagaacatttggcaatagagtgtcactggtctcagagagctgcggttattgga
gatgtcattcaggtctacagtggcagccatgggaggaccatcgtcttttgtgagaccaaa
aaggaggcaaacgaactggctctgaatgcttcaatcaaacaggattgccagtcgttgcat
ggtgacattcctcagaagcaacgagagatcaccctgaaaggttttagaaacggtaccttt
aaagttctggttgcaaccaacgtagctgcccgtggtttagatatccctgaagttgacctg
gttgtacaaagctcaccaccaaaggatgtggagtcctatatccatcgttctggacgcaca
ggtcgagctggacggactgggatctgtatctgcttttatcagcgaaaggaagaacatcag
ttaagatatgtggaacaaaaagcgggcattacgttcaagcgtgttggtgttcctactgca
acagatatcataaaggcttccagcaaagatgccatcaggtgtctggattctgttcctcaa
accgctattgagtatttcaaagaatctgctcggttgctaatagaagacaagggacctgtt
aatgccctggctgcagctctagcccatatttcaggtgctacttccattgaacagcgctcc
ctgctgaactcagatgtgggatttgttacaatgatactacactgctctgaagaaataaac
aatatgagctatgcttggcgaagactgcgagaactgttgggtgacaatgttgatagaaag
gtgaacagaatgtgtttcctcaaaggaaaaatgggtgtgtgctttgatattcctgcagca
gaccaaaaggaaatagaggcaagatgggaagattccaaacaatggcgtatgtgcgtggcg
actgaattacctgaattagtagaatcacaacgtggaggaggagacggaggaaatggccga
agcttctcaagctccaggaatgggcggcgtggtagctccggtagaaacagattcagaggc
agaggccagaaacgaagttttgacagagcatttgatcgttaa
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