Gavia stellata (red-throated loon): 104253219
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Entry
104253219 CDS
T08384
Symbol
RNF6
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gste04121
]
104253219 (RNF6)
Enzymes [BR:
gste01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104253219 (RNF6)
Ubiquitin system [BR:
gste04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104253219 (RNF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING_16
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
104253219
NCBI-ProteinID:
XP_009819903
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MDHSRHRAGNGNEQASSREHSHGEDERQRQLERLSREEAYYQFINELNEEDYRLMRDRNL
LGTPGEITAEELQQRLEGAKERLASQTDLDNREGEDSDVLGENSNGDSLLEWLNTFRRTG
NATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHEHNSFETAGDEYVGIDSSRMYLER
RHQRAVSPVTPRTRSRTAREANGEASSTARTRSVRGSVSQSSEAASYSVSGRLRSRTREL
SGLSQTNTTHNNSAATGEQREMPGRGTSTGVTRGRARTSVRMSTNQRLEILRLRSTLSSR
SRSPLQRQGDAAHSEEHGQRQDRSAQQVNRSRRQTAPPSPQPAEEQARGNTQTPQLSSVA
PSLGITLEEEESSRPVAAVRRHPTITLDLQVRRIRPGENRDRDSIASRTRSRVGMAENTV
TFESDSGGFRRTISRSERAGIRTYVSTIRIPLRRISETGLGEPSSVALRSILRQIMTGFG
ELSSLMETESNSEVQRGGHRLPDVQSEQNNSSSANNSSDASEVSSGNGHAVEGSRETSGQ
SDDIRRYGRNNENPDNRQSQDANNLVENGTLPILXDEDDDRLRGLTKEQIDNLSTRNYGD
IHTENEISKTCSVCINEYVTGNKLRQLPCMHEFHIHCIDRWLSENSTCPICRQPVLGSNA
TDNG
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggatcactcccggcaccgtgcaggaaatggcaatgagcaggcatcttcacgagagcat
agtcatggtgaagatgagagacagcggcagctggagcgcctcagcagggaggaggcctat
tatcagttcattaatgaactcaatgaagaagactacaggttaatgagggaccgaaacctg
cttggcactcctggggaaataacagcagaagagttgcagcaacgcttggagggggctaag
gagcgtctggcatcacagactgatctagataacagagaaggtgaagattctgatgttctt
ggagagaactcaaatggtgactctttgcttgaatggctgaacacatttcgtcgcacagga
aatgccactcgcagtggacagagtgggaaccaaacctggagagccgtgagtcgaacaaat
ccaaacagtggggaatttaggtttagtcttgaaatcaacataaatcatgagcataacagt
tttgaaactgctggtgacgaatatgtgggtatagatagtagcagaatgtatttagaaaga
agacatcaaagagctgtcagtccagtaaccccacgaacgaggagcaggactgcaagagag
gcaaatggtgaggcttcaagtactgcaaggacaaggtctgtaagaggttctgtgtcacaa
agctctgaagcagcctcttattcggtctcagggaggctcaggagtagaacaagggagttg
tcaggcctttcccaaacaaatactacacataataattctgcagctactggtgaacaaaga
gaaatgccaggaagaggtacttctacaggagtcacaagaggtagagctagaactagtgtt
cggatgagtacaaaccaaagactagaaattctgcggctgaggtctactttaagtagtcga
agccgctctccgctgcaaaggcaaggcgatgctgctcattctgaggaacatgggcagagg
caggatagaagtgcacagcaagtcaacagaagtagaagacaaacagctccgccttctcca
cagcctgctgaagaacaagcaagaggtaacactcagactcctcagctttccagtgtagcc
ccatccttgggaataactttggaagaggaggaatctagtaggccagtagctgctgttaga
aggcatccaacaattacgttagatcttcaggtgagaagaattcgtcctggagaaaacaga
gatcgggacagtattgccagtagaactcgttctagagtaggaatggcagaaaacacagtt
acctttgaaagtgacagtgggggatttcggcgtacgatatcacgatcagaacgtgcgggt
attcgaacatacgttagcactatccggatacctcttcgtcggatttcagaaactgggctt
ggtgaaccttcatcggtggctcttcgatcaatccttagacaaattatgacaggctttgga
gaactcagttctttgatggaaactgaatctaactcagaagtgcaaagaggtggtcatcgc
ttaccggatgtacagtcagagcagaataactcaagttcagcaaacaatagcagtgatgca
agtgaggtttcatctggaaatgggcatgcagtagaaggtagcagggaaacaagtggacag
agtgatgatattcgacgctatggtcgcaataatgaaaacccagataacaggcagtctcag
gacgctaacaacctagtggaaaatggaacgctgcccatactttaagatgaggatgacgat
cgtttaagaggtttaaccaaagagcagattgacaatctttctacccggaactatggggat
attcacactgaaaatgaaataagtaaaacgtgtagtgtttgcattaatgagtatgtaaca
gggaataagctaaggcagttaccttgtatgcatgagtttcatattcattgtattgatcgc
tggctttcggaaaactccacttgcccaatttgtcggcagcctgtattggggtctaacgcc
acagacaatggctag
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