Gavia stellata (red-throated loon): 104253464
Help
Entry
104253464 CDS
T08384
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gste03041
]
104253464 (DDX20)
Enzymes [BR:
gste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104253464 (DDX20)
Spliceosome [BR:
gste03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
104253464 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
SiaC
CMS1
Motif
Other DBs
NCBI-GeneID:
104253464
NCBI-ProteinID:
XP_009805237
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MLGFNLWNHSAAFKFNAWPLQILILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPL
NQDKIRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYS
SLPANKQMLAVSATYPESLANALTRYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLPYK
TFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQNQRLDA
MAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPVDWETYMHRIGRAGRFGTLGLSVT
YCCRGEEENMMMKIAQKCNLQLLPLPEPISPGMMDHYEDGEVEVKPVRHTGASVNSDTEC
LRPEEPVLQLVQNSFSEVPQPLPNLPGGKSSVERPKKALKQKQVKCTNSANIEKSSRTPQ
TSSCHTEQRNQVKTVSRMDGQHNTRSPDEEALKKNLPRIPCLSSFKTQQNNPWSFSEFVE
DYEYFIKEGLEREVEILRSYSGPGEQCELPRNGGVEWKEVEHNTEVVRNGVVSGGSDGSY
SSRASSNSRENNSCFEAFSDTQEKNAVATTRQGCAGFCPTPEKPRELSQVPKQNQVKKKV
LKQSTKQKKSHYHQFPSPSTRKTEDDCSCSSWDDGVPYEAWSYKSYWKSYYQAWQNYYAA
VSHYRKSYRQFNWMNAYHVNSVYLQELLKSGD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgctgggctttaatctttggaaccattctgcagctttcaaattcaatgcttggccctta
cagattctgatcttggctcctacgcgagagattgctgtgcagattcatgctgtaatcaca
actattggaataaaaatggaaggcttggaatgccacgtcttcattggaggaactcctttg
aaccaggacaaaatcagactaaagaagtgccacatagcagttggctccccaggtcgaata
aaacagctcatagagttggactatttgaatacagccagtatccggcttttcattcttgat
gaagcagacaagcttctagaagaaggcagctttcaggaacaaatcaattggatttattct
tcactaccggccaataaacagatgcttgctgtttcagctacttatcctgaatcgttagct
aatgctttgaccaggtatatgagagagccaacatttgtgaggttgaaccctaccgatcca
agtctcattgggctgaagcagtattacaagattgtgaattcccatccgcttccgtataaa
acatttgaggaaaaaacccagcacctacaggagttgttcagcaagattccatttaatcaa
gccttagtcttctcaaatttgcatagcagggctcaacatctagctgaaatactaacatcc
agaggctttcctgctgagtgcatttcaggcagcatgaatcaaaatcaacgacttgatgct
atggctaaattaaagcaattccactgtagagttctgatttccacagacttgacatctcgt
ggaattgatgctgaaaaagtgaatctggttatcaacctggatgtgcctgtggactgggaa
acgtacatgcatcgtattggcagagctgggcgctttggaactttaggcttatctgtcaca
tactgctgccgtggagaagaggaaaacatgatgatgaaaattgcgcagaaatgtaatctt
cagcttcttcctctaccagagcctatatctcctggaatgatggatcattatgaagatggg
gaggtagaagtcaaacctgttagacatacaggtgcttcagtgaattctgacactgagtgt
cttagaccagaggaaccagtactgcagcttgtccaaaatagtttttcagaggtacctcag
cctcttcctaatcttccaggtggtaagtcttctgtagaaaggccaaaaaaggctctgaag
caaaagcaggtaaaatgcacaaattctgcaaatatagaaaaaagtagcagaaccccccaa
acttccagttgccacacagaacagaggaatcaagtcaaaactgtctccagaatggatgga
caacataacactcggtctccagatgaggaggccttaaaaaaaaatcttcctagaattccg
tgcttgtcatctttcaaaacccaacagaacaatccctggagcttctcagagtttgttgaa
gactatgagtatttcattaaagaagggttggagagagaggttgaaattttaagaagctat
tcaggcccaggagaacaatgtgagctccccagaaatggtggtgtagagtggaaagaggtg
gaacataatacagaggtggtgcgaaacggtgttgtgtctggtggcagtgatggttcatac
agttccagggcttcctccaatagtagggaaaataactcatgctttgaagcattttcagac
acacaggagaagaatgctgttgccacgacgcgtcagggttgtgcaggcttctgtcctaca
cccgagaagcctcgggagctatcacaagtcccaaagcaaaatcaagtgaaaaagaaagtt
ctgaaacaaagcactaaacaaaagaaaagccattaccatcaattccccagtccttccacg
agaaaaactgaagatgattgctcctgcagctcctgggatgatggtgttccatatgaggct
tggagttacaaaagctactggaaatcttattatcaggcatggcaaaactactatgctgca
gtgtctcactacaggaaaagttacagacagtttaactggatgaatgcttatcatgtcaac
tcagtgtatcttcaggaactgctgaaaagtggtgattga
DBGET
integrated database retrieval system
