Gavia stellata (red-throated loon): 104253545
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Entry
104253545 CDS
T08384
Symbol
USP19
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 19
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gste01002
]
104253545 (USP19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gste04121
]
104253545 (USP19)
Enzymes [BR:
gste01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104253545 (USP19)
Peptidases and inhibitors [BR:
gste01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104253545 (USP19)
Ubiquitin system [BR:
gste04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104253545 (USP19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP19_linker
zf-MYND
UCH_1
CS
MYND_ZMYND11_ZMYD8
USP7_C2
Motif
Other DBs
NCBI-GeneID:
104253545
NCBI-ProteinID:
XP_009805343
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MSSSTNAPGQRRVSRGLDDATNKKKQKDRANQESKEVSRPELEQAESAQEKDSEEELLLD
WKQNADEIIVKLNLGSGAAWSTAXDAGPPLLADGRQWSCQFYEEIESSCSKVQCKKGNFL
QLVLQKKIPLHTWSSLLKRRKDGSKELAKGAMCWENGKEKTASAEVAPEEPRAEGAELPR
SRREPSNPKRAPGRSEALGGKSPASPGTQSGPSAKRAVYLKVAPTEEEPNARVTGSVEPS
KGHSGRAGSRRNGRASQVXXXXALADLAPPLEKAVVLTKETVPVEIPPLAATTEFFPHRV
ATCVEKRVLQPGSPAEALQGQDCTAVLGESSTAGPAATPSPGRGGXXXXXKEGNIFLCGF
ACSEPEPFVSLTFVKNDSYEKGNDLVVVHVYVKEIHKETSKVLFREQDFTLVFQTSDTNF
LRLHPGCGPHTVFRWQVKLRNLIEPDQCTYNFTVSRIDVCLKKRQAPLWAARGAANHRPT
LPPFXGAVGGAKVAMPTGPTPLDKNPPGSNQHPLSSKEEARASDKEKPRVEDGGLDGVAA
RPAPQQGPEHVAVKQEPHIPSPKPTCMVPPMTHSPVSTESVEDDEDEDEKKKVCLPGFTG
LVNLGNTCFMNSVIQSLSNTRELRDYFHDRSFESEINYNNPLGTGGRLAIGFAMLLRALW
KGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDS
DGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPFLYLPVPLPQ
KQKVLTVYYFAKEPHKKPIKFLVSISKENSSAMEVLDSVAHSVRVKPENLRLAEVIKNRF
HRMFLPSNSLDTVSPTDLLLCFEVLSPELAKERVVELQVQQRPQVPSGPVAKCAACQKKQ
LPEDEKLRRCTRCYRVGYCNVACQKTHWPDHKALCRPENIGFPFLISVPESRLTYARLAQ
LLEGYARYSVSVFQPPFQLGRMSPEQGLQPLVPDKLEPLAKSSCAAATSAPELGDGDRAS
SLLQEPPLSPAVPELHPELGDTGTVRSKVLAARSSLLSLDSGFSEHMESQGDSCCEKEPS
YERALKPEAAIPGYQHTPDLLSARATQFYINKIDAANREHKLEDKGDTPLELTDDCSLAL
VWKNNERLKEFVLVESKELECVEDPXXXXXAARAGHFTLEQCLNLFTKPEVLAPEEAWYC
PKCKQHREASKQLMLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVR
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagcaccaatgcccctggccagaggagagtgtctcggggcttggatgatgcc
accaacaagaagaagcagaaggatcgagccaaccaggagagcaaggaagtgtctcgccct
gagctcgagcaggctgagagtgcccaggagaaggactcagaggaggagctgctgctggac
tggaagcagaacgctgatgagatcattgtcaagctgaaccttggctctggagctgcttgg
agcactgcctgagatgctggtccccctctgcttgcagatgggcgccagtggagctgtcag
ttctacgaggagattgagagctcctgcagcaaggtccagtgcaagaagggcaactttcta
caacttgtgcttcagaagaagatcccactgcatacctggtcttcgcttctgaagagaagg
aaagatggatccaaagagctagccaaaggggccatgtgctgggagaatgggaaggagaag
actgcttctgcagaggtggcccctgaagagccgagggctgaaggtgcagagctgccgagg
tcccggcgggagccctccaaccccaagcgcgctccgggaagaagtgaggccctgggaggg
aaaagcccagccagcccagggacacagagcggccccagcgccaagcgggcagtatacctc
aaagtggctcccactgaagaggagccaaatgccagagtcactgggagtgtggagcccagc
aaaggacacagcgggagggcaggcagccgccgcaatggcagagccagccaggttnnnnnn
nnnncggccctcgcagaccttgcaccgccactggaaaaggctgtggttttgaccaaggag
actgttcctgtggagataccacctcttgcggctaccacagagtttttcccccaccgtgtt
gccacctgcgtggagaagagagtcctgcagccaggcagccctgctgaggccttgcagggc
caggactgcacagctgtcctgggagagagctctacggctggtccggccgccaccccctcc
cccgggcgcgggggggnnnnnnnnnnnngcaaggaaggtaacatctttctttgcggcttt
gcttgttcagagccagaaccttttgtgagcctgacctttgtcaagaatgactcatacgag
aagggcaatgacctggtggtagtgcacgtctatgtgaaggagatccacaaggagacgtcc
aaggtgttgttccgggagcaagacttcacgctagtgttccagacgagcgacacaaacttc
cttcgcctccatcctggctgtgggccccacacagtgttccggtggcaggtgaagctcagg
aaccttattgagccggaccagtgcacatacaacttcacggtgtctcgcatcgacgtctgc
ctgaagaaacgccaagccccactgtgggcagcgcgtggtgctgctaaccacaggcccacc
cttccccctttttaaggtgcagtgggtggtgcaaaggttgccatgcctacaggccctacc
cctctggacaagaaccccccgggcagtaaccagcaccccctgtccagcaaggaggaggcc
cgagccagtgacaaagagaaaccacgcgtggaagatgggggtctggatggcgtggcagcc
cgtccagccccacagcaaggcccagagcatgtggcagtgaagcaagagccgcacattccc
tcgcccaaaccgacatgcatggtgccaccaatgacacacagccctgtgagcaccgagagt
gtggaggatgatgaggatgaggacgagaagaagaaggtgtgtctgcctggcttcactggg
ctggtgaacctgggcaacacctgcttcatgaacagcgtcatccagtccctgtccaacacc
cgagagctgcgtgactacttccatgatcggtcctttgagtcagaaatcaactacaacaac
ccactggggacagggggacgcctggccatcggctttgccatgctgctgcgagcactgtgg
aagggcacgcaccatgccttccagccctctaaactgaaggcaatcgtggccagcaaggcc
agccagttcactggctatgcccagcacgatgctcaggagttcatggccttcctgcttgat
ggcctgcatgaggacctcaaccggatccagaacaagccctacacagaaactgttgactca
gatgggaggcccgacgaggtggtagctgaggaggcctggcagcgacacaagatgaggaat
gactctttcattgtggacctcttccagggccagtacaaatccaagctggtgtgcccagtg
tgttccaaggtgtccatcaccttcgaccccttcctgtacctccctgtgcccctcccgcag
aagcagaaggtgctgactgtctactactttgcaaaggagccgcacaagaaacccatcaag
tttcttgtgagtatcagcaaggagaattctagtgccatggaggtacttgactcggtggcc
catagtgtgcgtgtgaaaccagagaacctgcgcctggcagaggtgatcaagaatcggttc
caccgcatgttcctgccgtccaactcgctggacacagtctcccccacggacctgctgctc
tgcttcgaggtgctgagcccagaactggccaaggagcgggtagtggagctgcaggtccag
cagcgtccacaggtgcccagtggccccgttgccaagtgtgcagcctgccagaagaagcag
ctgccagaggatgagaagcttaggcgctgcacgaggtgctatcgagttggttactgcaat
gtggcatgtcagaaaacacactggccagaccacaaggccttgtgccgccccgagaacatc
ggtttccccttcctcatcagcgtgccggagtcccgcctcacctatgcccgcctggcccag
ctgctggagggctacgcaaggtactcagtcagcgtgttccagcctccattccagctggga
cggatgtcgccagagcagggcctgcagcctctggtcccagacaagctggagcccctggcc
aagagcagctgtgcagcagccacctctgcccccgagctgggggatggggacagggcttcc
agcctcctgcaggagcccccactctcgccagctgtgcctgagttgcacccggagctgggg
gacactggcactgtccggagcaaggtcctggcggccaggagttccctgctgagcttggat
tcgggcttctccgagcacatggagtcgcagggcgacagctgttgtgagaaggagccgtcc
tatgagagagccctcaagccagaagctgccatccctgggtaccaacacactccagacttg
ctcagtgcccgcgccacgcagttctacatcaacaagattgacgctgctaaccgagaacac
aagctggaagataaaggtgacacccccctggagctgacagacgactgctccctcgccctg
gtgtggaagaacaatgagcgcctcaaggagtttgtgttggtggagtccaaggagctggag
tgcgtggaggacccnnnnnnnnnnnnnnnagcagcccgggctggccacttcaccctggag
cagtgcctcaatctcttcaccaagcccgaagtcctggccccagaggaagcatggtactgc
cccaagtgcaagcagcaccgcgaggcctccaagcagctgatgctgtggcggctgcccaac
gtcctcattatccagctcaagcgcttctccttccgcagctttatttggagggacaagatt
aatgacatggtggacttccctgtccggtga
DBGET
integrated database retrieval system
