Gavia stellata (red-throated loon): 104253682
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Entry
104253682 CDS
T08384
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gste03041
]
104253682 (DDX17)
Enzymes [BR:
gste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104253682 (DDX17)
Spliceosome [BR:
gste03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104253682 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104253682
NCBI-ProteinID:
XP_009805513
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
FGASRGGPLPPKKFGNPGERLRKKKWDLNELPKFEKNFYVEHPEVARLTPYEVEELRRKK
EITIRGMEGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQ
TGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKST
CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFE
PQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIVDV
CMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPE
RDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKG
TAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGGGGGRSRYRTSSSVNN
PNLMYQEECDRRLRGVKEGRRDSGGFRDRERGDSYANGANKTYGSAYGSPNSAFGAAQSQ
YGYTQGSSAAYGTSGYGTAEYSASGYGASTTAATAGRTSQSTTQQQYAGMVGRSGQ
NT seq
1789 nt
NT seq
+upstream
nt +downstream
nt
gtttggagcaagtcgtggaggtcctcttcctccaaagaaatttggtaatccaggggaacg
tttacgtaagaaaaagtgggatttaaatgaactgcctaagtttgagaagaatttttatgt
ggaacatccagaagtggccaggcttactccgtacgaagttgaagagttgcgaagaaagaa
agagataacaattcgaggaatggagggctgccccaagcctgtgtttgccttccaccagtg
tagctttccgcagtatgtgatggatgccttgatggaccaaaacttcacagaacccactcc
aattcagtgccaaggctttccactagccctcagtggtcgtgatatggtgggcattgcgca
gactggctctgggaagacactagcatacttgttgcctgcaattgttcacatcaaccacca
gccatatttggagagaggggatggcccaatttgtctggttctagcacctactagagagtt
ggcccagcaagtgcagcaggtggctgatgattatggcaaatgttcaagactgaagagtac
ctgcatatatggaggagcacccaaaggtccccaaatcagagatctagaaagaggtgtgga
gatctgcattgctacaccaggtcgcttgattgacttccttgaggcaggaaagaccaacct
tcgtcggtgtacatacctggtgctggatgaagcagacaggatgctggacatgggatttga
accccaaattcgtaaaattgttgaccagataaggcctgacagacagactctgatgtggag
tgccacctggccaaaagaagtgcggcagcttgccgaggacttcctgcaggactatgttca
gatcaatgtgggaaacttggagctgagtgccaaccacaatatcctgcagatagtggatgt
atgcatggaaagcgagaaagaccataaactgatacaactgatggaagaaatcatggcaga
gaaggaaaacaagactatcatctttgtggagacaaagaggcgatgtgatgatctcactcg
aaggatgcgcagagatggttggccagctatgtgtatccatggagacaagagtcagccaga
aagagattgggtgcttaatgagtttcgttctggaaaggctcctatcctcattgctaccga
cgttgcatctcgtgggctagacgtggaagatgttaaatttgtgataaactacgactatcc
gaacagctctgaagattatgtgcaccgtattggccgtactgcacgtagtaccaacaaagg
tactgcctacaccttcttcacaccaggaaacctgaaacaagccagggagcttatcaaagt
gttggaagaagccaatcaagccatcaatccaaaactgatgcagcttgtggaccacagagg
aggaggaggtggtggtggaggaggtcgttctcgttaccgaacgagcagttcggtaaacaa
ccctaacctgatgtaccaggaagagtgtgacaggaggcttcggggagtgaaagagggacg
gagagactcaggtggcttcagagaccgtgagcgtggtgacagttatgccaacggagccaa
caagacctatggcagtgcctacgggagcccaaattctgctttcggggcagcacagagcca
gtatggttacactcaagggagctccgctgcctatggcacgagtggctatggcactgcaga
gtacagtgctagtggctatggtgccagcaccacagctgccaccgctgggagaacctcaca
gagcactacccaacagcagtatgcagggatggtggggcgctcgggccag
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