Gavia stellata (red-throated loon): 104253973
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Entry
104253973 CDS
T08384
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04382
Cornified envelope formation
gste04510
Focal adhesion
gste04512
ECM-receptor interaction
gste04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104253973
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104253973
09142 Cell motility
04820 Cytoskeleton in muscle cells
104253973
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104253973
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gste04147
]
104253973
00536 Glycosaminoglycan binding proteins [BR:
gste00536
]
104253973
Exosome [BR:
gste04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104253973
Glycosaminoglycan binding proteins [BR:
gste00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104253973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104253973
NCBI-ProteinID:
XP_009805889
LinkDB
All DBs
Position
Unknown
AA seq
1666 aa
AA seq
DB search
GGKTYTGPCGGRDCSGGCQCFPEKGSRGQPGLLGSQGFTGPPGLMGIPGVQGPKGHKGER
GYPGISGPKGEMGQRGVTGFPGADGIPGHPGQPGSRGKPGHDGCNGTVGDPGDSGSPGLS
GFPGTIGVQGPKGQKGEPYILPPDIASRYRGEPGDPGFSGFPGPPGTLGIQGPVGPRGER
GRPGPPGPPGPPGPQGNRGLGFYGEKGEQGPPGPPGPPGLPTRELMGVPSDKHKGERGEP
GPKGEAGIPGVLLYAPEKGEEGVMGFPGQRGLPGINGFPGLSGERGFPGFDGSPGGYGPR
GSKGEPGEIGPPGPVSYFPSRIPRKGARGDPGFPGVSGLQGDPGEEGDRGLPGLPGFSDV
DGDKPGLPGEMGPKGEKGEFGSPAYQAGPPGFPGKHGTPGLRGPPGPAGSPGPLFGLKGQ
EGTPGRFGIQGFPGPRGQKGPKGEEGDCSKCLVGDEIRRGSTGPPGPPGFPGTPGQPGRK
GEPGDPGPHGIPGYPGAKGFSGQDGFPGPKGEKGDSLHITTKGTKGIRGDPGLPGIRGED
GFPGRDGLDGLPGQPGLPGDGIRGFPGDPGYPGELGPKGFPGEAGQPGEGFPGPKGYRGP
PGDHGQDGNPGIPGLPGLPGEPGQLDCGQVTEDFSRGDGTEPIWSGAGCVRPPKGSQGKP
GLPGATGAKGARGFPGDPGPVGYPGLNGTRGDPGREGFPGPPGFTGIRGDRGPNGLPGLQ
GHPGLTGKSGAPGAAGLKGFPGDVLGAAAGSRGDVGLPGFPGLKGMPGDQGVPGIRGADG
NPGLPGPKGDPGPQGLPGLMGLPGAPGTHGFPGPPGNPGPDGRPGSQGPLGPPGARGEDG
EQGFPGPIGLKGLSGDKGETGYPGLQGIPGVMGPPGISGIDGFAGDKGSRGSPGIDGFKG
MTGLKGRPGIKGIKGDFGLSGAPGDKGSQGARGFKGDRGDQGPPGEPPKLKPSMMMEVKG
EKGDVGETGTKGFFGLKGSKGMPGVPGKTGTPGSPGHPSYVAGVKGDIGAKGLTGLKGYP
GPAGSPGIRGFPGSTGGRGEKGSAGTTGHLGTPGSHGEVGEQGDTINLPVGVPGLTGRRG
GAGQKGEGGDPGFPGIEGLKGTQGVPGSVGQEGLPGLVGPPGQQGSPGTPGFQGEKGTPG
WPGLPGQAGLPGLRGISGLHGLPGTKGLPGSPGPDGYGSAGFPGAAGDKGEAGEPSRVEG
SRGPPGQKGDRGVPGVQGPFGIXGPPGISNISGYPGDKGSPGLDGVPGYPGLQGQPGIPA
PPGSKGESGQTGVSGQIGPKGSKGDPGSAGRPGIPGYPGPKGRKGEQGVIGFMGTVGFPG
DLGPIGPKGDRGVTGFQGPPGSPGLPPLPPRLVAQQGSPGPRGNIGPQGSPGDTGPQGPP
GDPGFRGSPGEPGLQGRGGIPAPPGFRGEQGATGFQGPVGFEGQPGRPGSPGLPGMPGRS
ISMGYLLVKHSQSDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMP
FLYCNPGDICYYANRNDKSYWLSTTAPLPMMPVAEEDIRPYISRCSVCEAPAVAIAVHSQ
EASIPHCPEGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTC
HYFANKYSFWLTTIDQPFQSKPSADTLKAGLIRSHISRCQVCMKNL
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
ggcgggaagacttacacgggaccatgtggaggaagagactgcagtggaggatgtcagtgt
ttccctgaaaaaggaagccgtggccagccaggactccttggatcacaggggttcactgga
ccgccaggattgatgggcatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaaga
ggatatccaggaataagtgggcccaaaggagaaatggggcaaagaggagtcactggattc
cctggggcagatggcattccgggtcatccagggcagccaggatcaagggggaagccaggt
catgatggctgtaacgggacagtaggtgaccctggtgactcgggaagtcctggactctct
ggtttccctggtaccattggagtccaagggccaaagggccagaagggggagccctatata
ctgccaccggacatcgcaagtcgatacaggggggaacctggagatccagggttcagtggt
tttccgggacctccgggcacgctgggtattcaaggacctgttggtccaagaggagagcga
ggaagaccaggaccaccagggcccccaggaccaccaggaccacaaggcaacaggggcctt
ggcttctatggagaaaaaggtgaacagggccccccaggtcctccaggtccacctgggctt
cctacaagagaactgatgggtgtcccctctgacaaacacaagggtgaaagaggagaacct
ggaccaaaaggggaagctggaattccaggtgtacttctctatgctcctgaaaaaggtgaa
gaaggggtaatgggcttcccagggcaaaggggactgcctggcatcaatggttttccagga
ctcagtggagaaagaggttttccaggatttgatggttcaccaggtggctacggtcctagg
ggaagcaagggggagccaggcgagatcggtcctccaggaccagtttcctattttccttcc
cgcatcccaaggaaaggtgcaagaggtgatccaggctttccaggtgtttctggactacag
ggagatccaggagaggagggagatcgtgggctgcctggtcttcctggattctctgatgtg
gatggggataagccaggcttacctggagaaatgggaccaaaaggcgaaaaaggtgaattt
ggatctcccgcttatcaggcgggcccgcccgggtttccgggtaagcacggcacaccagga
ctccgtggtccacctggtcctgctggatcccctggtcctctcttcggattaaaaggacag
gaggggacgccaggtagatttggcatacaaggtttccctgggccaagaggacaaaaagga
cctaaaggcgaagaaggggattgcagtaaatgccttgtgggtgatgaaatccgaaggggc
tctacaggcccccctggccctcctggctttccaggaacccctggccagcctgggaggaaa
ggagaacctggtgacccgggaccacatggtattcctggctacccaggagcaaaaggattt
tcaggtcaagatggatttcctggaccaaaaggagaaaagggagattctttacacataact
actaaaggcaccaaaggaatccgaggagatcccgggctgcctggtatccgaggtgaagat
ggtttcccaggcagagatggattagatggtttaccaggacagcctggccttccgggtgat
ggtatcagaggtttcccaggtgatcctggttatccaggcgaattgggcccaaagggcttt
ccaggagaagcaggccagccgggtgaaggatttcctggtccaaaagggtaccggggtcct
ccaggtgaccatggacaagatggaaacccgggaattccaggtctgcccggtctgccagga
gagcctggccaactagactgtgggcaggtcactgaagacttttctagaggagatggaact
gagccaatatggtcaggcgcgggctgtgtgaggccaccaaagggatcccaaggcaagcca
ggactgccaggagccacaggtgcaaaaggtgcaagaggattcccaggtgatccaggtcca
gtgggatacccagggctaaatggtacacgaggtgatccaggtcgggaaggattcccaggt
cctccaggttttactgggatcaggggagacaggggcccgaacggtttacctggactgcag
ggacacccaggccttacaggaaaatccggtgctccaggagcggcaggactgaagggcttt
cctggtgatgttttaggagcagcagcaggttcccgaggggatgtcgggctccccggcttc
ccggggttgaaaggcatgccaggagatcaaggagtaccgggaattagaggagcggatggt
aacccaggtttgccaggacccaaaggagatccagggcctcaaggtctccctggtttgatg
ggattgccaggagcaccagggacgcatggattcccagggccaccaggaaaccctgggcca
gatggcaggccgggctctcaaggaccccttggtccacctggtgctaggggagaagatggt
gagcaaggttttcctggccccattggcctgaaaggtctgtctggtgacaaaggtgaaaca
ggttacccaggattacaaggtatacctggcgtgatgggtcctcctggcataagcggaata
gacggctttgcaggagataaaggctcaagaggttcacctggcattgatggtttcaaaggc
atgacagggctaaaaggaagaccaggcatcaagggaatcaaaggagattttggcctgtct
ggggctccgggcgataaaggctcacagggcgcacgtggctttaaaggtgaccgtggggat
caaggccccccgggagaacccccaaagctcaagcccagcatgatgatggaagttaaaggt
gaaaaaggagatgttggagaaacgggcacgaagggattctttggcttaaaaggtagcaag
ggaatgccaggcgttcccggaaagacaggaactccagggtcccctgggcatcccagctat
gtggccggtgtgaaaggggacatcggcgcgaaaggcctgacaggtctgaaagggtatcct
ggtccagctggctctcctggcatcagaggcttccctggcagcacaggaggcaggggagaa
aagggtagtgcaggaactacaggccatcttggtactcctggctcacatggtgaagtaggt
gagcagggagatactataaacttaccagttggtgtgccaggcttaacaggcagaagagga
ggtgcaggacaaaaaggcgaaggcggtgatcctggtttccctggcattgaaggcctcaag
ggcacacagggtgtccctggctctgtgggacaggaaggtttgccggggctggtcggcccc
ccagggcagcaaggaagccctgggacgcctggatttcaaggtgaaaagggaactcccggc
tggcctggcttaccaggacaagcaggcttgcctggcttaagaggaatcagtggactgcat
ggtttaccgggcaccaagggcttaccaggatcaccaggtccagatggctacggctctgca
ggtttcccaggtgcagcgggtgacaaaggggaagcaggagagccaagcagagtggaaggc
agccgaggacctccgggtcagaagggagacagaggtgttccaggagtccaaggacccttt
ggcatancagggcctcctgggatttcaaatatatcaggatatcctggtgataaaggctcc
ccaggtctagatggagtgccaggctatccaggactacaggggcagcctggaataccggct
ccaccaggaagcaaaggagaaagtgggcaaacaggtgtgagtggacaaattggcccaaaa
ggaagtaaaggtgatcctggatcagcagggagacctggtattcccggataccctggacca
aaaggtcgtaagggtgaacaaggtgtcatcggctttatgggcacagtaggatttccaggt
gatctgggacctatcggacccaagggggatagaggagtaactggctttcagggccctcca
ggctctcctgggctgcctcctcttcctccaaggctggttgctcagcaaggttcaccaggt
ccccgtggaaatataggacctcaaggaagcccaggagatacgggacctcagggtccacca
ggcgatccaggtttcagaggctcacctggagagccaggactccagggcaggggtggcatt
ccagctcctcctggcttcagaggtgaacaaggagcaacagggtttcagggtccagtggga
tttgaaggtcaaccaggccgccccggtagccccgggctgccaggcatgccgggtcgcagc
attagcatgggctacctgctggtgaagcacagccagtccgatcaagagccaatgtgtcca
gttggcatgaacaaactctggagtggatacagcctactgtactttgaaggacaagagaaa
gcacataaccaggatctagggctggccggctcatgtttggctcgttttagtactatgcca
ttcctctactgtaaccctggggatatttgttattatgcaaatcgaaatgataaatcctac
tggctctcaactacagcacctcttccaatgatgcctgtggcagaagaagacattaggcca
tatatcagccgctgctcagtttgtgaggccccagctgtggcaattgctgtccatagccaa
gaagcttctattcctcactgcccagagggctggcgcagtttgtggatcggctattccttc
cttatgcacactgctgctggtgatgaaggtggaggacagtcgctggtttctcctgggagc
tgcctggaagacttcagagcgactcctttcatcgaatgcaacggcgcacgcggaacctgt
cactactttgcaaataaatacagcttctggctcactacaattgaccagcccttccaaagc
aagccttcggcagatacactcaaggcaggactcatccgaagccatatcagcagatgtcaa
gtctgtatgaaaaatctatag
DBGET
integrated database retrieval system
