Gavia stellata (red-throated loon): 104254295
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Entry
104254295 CDS
T08384
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104254295 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gste03021
]
104254295 (SMARCA5)
03036 Chromosome and associated proteins [BR:
gste03036
]
104254295 (SMARCA5)
Transcription machinery [BR:
gste03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
104254295 (SMARCA5)
Chromosome and associated proteins [BR:
gste03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
104254295 (SMARCA5)
RSF complex
104254295 (SMARCA5)
WICH complex
104254295 (SMARCA5)
B-WICH complex
104254295 (SMARCA5)
NORC complex
104254295 (SMARCA5)
BRF complex
104254295 (SMARCA5)
NuRF complex (fruit fly)
104254295 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
104254295
NCBI-ProteinID:
XP_009806305
LinkDB
All DBs
Position
Unknown
AA seq
994 aa
AA seq
DB search
ECFDDESPGKQKEIQEADPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLK
MKPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGK
LRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKS
TLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKK
FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVF
NSSEDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKM
QREWYTRILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLV
TNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQ
ASINAYNEPGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQT
KTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGAT
HVFASKESEITDEDIDHILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDY
REKQKMAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPP
RLFELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLT
QGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEK
IMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML
HKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKE
KAEKKKRGPKPSSAQKRKMDGTPDGRGRKKKLKL
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
gaatgttttgatgatgagtcaccaggaaaacaaaaagaaatccaggaagcagatcctaca
tacgaagagaaaatgcaaacagacagagcaaacagatttgagtatctattgaagcagact
gagctgttcgctcatttcattcagcctgctgctcagaaaactccaacttcacctttgaaa
atgaagcctggacgtccacgaataaagaaggatgagaaacagaatttactgtcagttggc
gactaccgccatcgtagaacagagcaggaagaagacgaggagctgttaacagaaagctcc
aagacaactaatgtctgcactcgatttgaagaatctccatcatatgttaaatggggaaag
ctgcgtgattatcaggtccgaggattgaactggctcatctctttgtatgaaaatggcatc
aatggtatcctagcagatgaaatgggtcttgggaagacgctgcaaacaatttctcttctt
gggtatatgaaacactacagaaatattcctggtcctcacatggtgttagttcctaagtcc
actctacataactggatgaatgaattcaagagatgggtacctacacttcgagcagtttgt
ttgataggtgacaaagaccagcgagctgcctttgtcagagatgtgttgctgcctggagaa
tgggatgtctgcgtaacatcatatgaaatgcttatcaaagagaagtcagtattcaaaaag
tttaactggagatacctagttatagatgaagcccacaggattaaaaatgaaaaatcaaag
ttatcagaaattgtgagggaattcaagaccacaaatcggctgctattaactggaactcca
ctgcagaacaacttacatgaactctgggcacttcttaacttccttttgccagatgtcttt
aactcatctgaagactttgattcatggtttgatacaaacaactgtctgggggatcaaaaa
ttggtggaacgtctccacatggtgctacgaccattccttctgcgtcgcattaaggctgat
gtagagaaaagcttacctccaaagaaggaagttaaaatttatgtgggtctcagcaaaatg
caacgagaatggtatacgcgaatcttaatgaaggatatagatatattgaactcagctggg
aagctggacaaaatgagactgttgaatatcctcatgcagctgcgaaaatgttgcaatcat
ccgtatctctttgatggagcagaacctggtccaccttacacaacagatatgcatttggtc
accaacagtggcaaaatggtagtattggacaaattgctacctaagttgaaagaacaaggt
tcgagagtcttaatcttcagtcagatgaccagagtcttagatatcttggaggattactgt
atgtggcgaaattatgaatattgtagactggatggacaaacaccacatgacgagagacag
gcatctattaatgcctataatgaacctggtagctcaaaatttgtgttcatgttgagtaca
cgggcaggaggtcttggaatcaatttggctactgctgacgtcgtaattctgtatgattca
gactggaatccacaagtagatcttcaagctatggatcgagcgcacagaattggccaaaca
aagactgttcgagtgttcagatttatcacagacaatacagtggaagaaagaatagtggaa
cgtgcagaaatgaaactccggctagattccatagtcatccagcaaggaagactggtggat
caaaacctgaataaacttgggaaggatgaaatgctgcaaatgattagacatggagcgaca
catgtgtttgcctcgaaggagagtgagattacagatgaagacattgatcacattttggaa
agaggtgcaaagaagactgcggaaatgaatgaaaaactttcaaagatgggtgaaagttcc
ctcaggaatttcacaatggatacagagtccagtgtgtataattttgaaggggaagactac
agagaaaaacagaagatggcatttacagagtggattgaaccacctaaacgagaaagaaaa
gccaattatgctgtggatgcttacttccgagaggctcttcgagtcagtgagccaaaagca
cccaaggcaccacggcctccaaaacagccaaatgtacaggactttcagttctttcctcca
cgcctgtttgaactattggaaaaagagattctctactacaggaaaacaattgggtacaag
gtgcctcgtaatcccgatctgccaaatgcagcccaagcacaaaaggaagagcagcttaag
attgatgaggctgaacctcttaatgatgaagagctagaagaaaaagagaagcttctaacc
cagggattcactaactggaataagagagattttaaccagttcatcaaagctaatgagaag
tggggccgtgatgacatagaaaatatagcacgagaagtagaaggaaaaaccccagaagaa
gtcatcgagtattcagctgtgttctgggaaagatgcaatgaactccaagacatagagaag
atcatggctcagatagaaagaggagaagccagaattcagagacgaatcagcataaaaaaa
gcacttgatacaaagattggcagatataaagcccctttccaccagctaagaatatcatat
ggtactaataaagggaagaattacaccgaagaggaggatcgctttctcatctgtatgctc
cacaagctaggatttgataaagaaaatgtctatgatgaattaagacagtgtatccgaaac
tccccgcaattcagatttgactggtttctcaagtccagaactgcaatggagctgcaaagg
agatgcaatactttaatcaccctgattgaaagagaaaacatggaactggaagaaaaggaa
aaggcagaaaagaagaaacgtggaccaaaaccatcttcggcacagaagcgcaaaatggat
ggtactcctgatggtcgtggacgaaaaaagaagctaaagctgtga
DBGET
integrated database retrieval system
