Gavia stellata (red-throated loon): 104254529
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Entry
104254529 CDS
T08384
Symbol
DHX15
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104254529 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gste03041
]
104254529 (DHX15)
03009 Ribosome biogenesis [BR:
gste03009
]
104254529 (DHX15)
Enzymes [BR:
gste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104254529 (DHX15)
Spliceosome [BR:
gste03041
]
Complex A
U2 snRNP components
U2 related factors
104254529 (DHX15)
Complex B
104254529 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104254529 (DHX15)
Ribosome biogenesis [BR:
gste03009
]
Eukaryotic type
90S particles
Helicases
104254529 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
104254529
NCBI-ProteinID:
XP_009806637
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
IPTLRLYIQVSHFLLCLLTHFRKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLRP
TSNSTYYAAAGLPTIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILI
RHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDV
MLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDI
LMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDY
LEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYST
LPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRI
RVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV
LQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQL
AKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVY
HAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRK
ALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCT
DIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
attcctactctgcgtttatatattcaagtatctcattttctgctgtgtctcttaactcat
tttaggaaagatcgggaccgggacagggaccgtgatgaccgttctaaagatcgtgacagg
gatcgtgacagagatagagatcgtgacagagaaagggacaaggaaaaagatttgcgacct
acatctaactctacatattatgcggctgctgggttaccaactataaaaccagcaatgatt
ccacacagtattaaccctttcacaaatctgccacatacaccacgatattatgacatcctg
aaaaaaaggctacagcttcctgtctgggaatataaagaaagatttacggatattttgatt
aggcatcagtcatttgtgctggtcggagagactgggtctggtaaaacaacacagattcct
caatggtgtgttgactacatgcgctcattacctggaccaaagaggggagtagcatgtacc
cagcctaggagagtagctgcaatgagtgtggcacagcgggttgctgatgagatggatgtc
atgctgggccaggaggttggttactctattcgatttgaagactgcagtagtgcaaaaacc
attttgaagtatatgactgatggtatgttacttcgtgaagcaatgaatgatcctttgctg
gagcgctatggtgttataattcttgatgaggcccatgagagaacactggctactgatatt
ttgatgggagttctgaaggaagttgtaagacagagatccgatttaaaggttatagttatg
agtgctactttagatgctggcaagtttcagatctattttgataactgtcctcttctaact
atcccgggtcgcacccatcctgtggagatattctatactccagaaccagaaagggactac
cttgaggctgccattcgaacagtgatccaaattcacatgtgtgaagaagaagaaggagat
ctcttactctttcttactggacaggaggagattgatgaagcctgcaagaggataaaacgt
gaaattgatgatttaggccctgaagttggtgacatcaaaatcattccattgtattccacc
cttcctccgcaacaacagcaaaggatttttgaacctcccccaccaaaaaaacaaaatgga
gcaataggaagaaaggttgttgtgtccactaatattgctgagacatcattaacaatagat
ggtgttgtgtttgtgattgatcctgggtttgcaaaacagaaggtatacaatcctcgtatc
agagtggagtctctcttggtgactgcaattagtaaagcttctgctcagcagcgagctggc
cgtgctggtcgtactagaccgggcaagtgcttcaggctttatacagagaaggcttacaaa
actgaaatgcaggacaacacataccctgaaattttgaggtctaacttaggatctgtagta
ttgcagctcaagaagcttggtatagatgatttggtgcactttgattttatggatcctcca
gctcctgaaactctgatgagagccttagagcttttgaattacctggctgctttaaatgat
gatggagacttgactgagttgggatccatgatggctgaatttccattggacccacagctg
gctaaaatggttattgcaagttgtgactacaactgttctaatgaggtcctatctattact
gccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagcagat
gaagccaagatgaggtttgcccacatagatggagatcatttgacattgctgaatgtctac
catgctttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttcattaactac
aggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggatagattt
aatttgcctcgtagaagcacagactttaccagcagagactattacatcaacataagaaag
gcattagttactgggtatttcatgcaggtggcacatttggaacgaacagggcattactta
acagtaaaagataaccaggtggtgcagttgcatccttccactgttcttgatcataaacca
gaatgggtgctctataatgagtttgtccttacaacaaagaattacatccggacgtgtaca
gacatcaagccagaatggctggtgaaaattgcccctcaatattatgacatgagcaatttc
ccacagtgtgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaaggaa
tactcgcagtactga
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integrated database retrieval system
