Gavia stellata (red-throated loon): 104254572
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Entry
104254572 CDS
T08384
Symbol
PNPT1
Name
(RefSeq) LOW QUALITY PROTEIN: polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104254572 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104254572 (PNPT1)
03016 Transfer RNA biogenesis [BR:
gste03016
]
104254572 (PNPT1)
Enzymes [BR:
gste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
104254572 (PNPT1)
Messenger RNA biogenesis [BR:
gste03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
104254572 (PNPT1)
Transfer RNA biogenesis [BR:
gste03016
]
Prokaryotic type
tRNA degradation factors
104254572 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
OAF_N
Motif
Other DBs
NCBI-GeneID:
104254572
NCBI-ProteinID:
XP_009806688
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MELSSGKLARFADGSAVVQLGDTAVMVTAVSKTKPSASQFMPLVVDYRQKAAAAGRIPTN
YLRRELGSTDKEILTSRVIDRSIRPLFXFYDTQILCNLLAVDGVNDPDVLAINGASAALA
LSDIPWNGPIGAVRVGLVDGETIINPTRKQMSSSALNLVVAGAPQNQVVMLEATAENILQ
QDFCHAIKVGVKHTQQIIQGIQQLVKERGVVKRTVQKLFVAPEEIVECAKKLAFNKIYAV
FTDSSHDKISRDEAINKIRLETEEQLKEKFPEAEPYEILESFNVVSKDIFRNLVLNEYRR
CDGRDLTSLRDIKCEVNMFKMLHGSALFQRGQTQVLCTVTFDSIESSVKSDLISTAVSGI
KDKNFMLHYEFPPYATNEIGKVTGMNRRELGHGALAERALKPIIPQDFPFTIRVTSEVLE
SNGSSSMASACGGSLALMDAGVPVSSAVAGVAIGLITKCSLEKGDIEDYRLLTDILGIED
YYGDMDFKMAGTNKGVTALQVDLKLPGIPIKIVMEAIQQATAAKREILQIMNQTLAKPRP
NRKESGPVVETIHVPLSKRLRFVGPGAYNLKKLQAQTGVTVSQLDEETYSVFAPTPSAMH
EAREFIREICKDDQEVNLEFGAVYTATITEIRDSGVMIKLYPNMTPVLLHNSQLDQRKIK
HPSALGLEVGQEIQVKYFGRDPTDGRMRLSRKILQSPATTVLKTLTDKTSIVLGGTVPQS
STSSQ
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggaactgtcttccggaaaacttgctaggtttgctgatggatctgctgttgttcagcta
ggtgacacagcagtcatggtcacagcagtcagtaaaactaagccttctgcatctcagttt
atgccattagtggttgactatcgtcagaaagctgctgcagcaggaagaattcctacaaac
tatctaagaagagagcttggttccactgataaagaaattcttacaagcagagtaatagat
aggtcaatcagaccactctttnnattttatgatacccagatcctttgtaatcttttagca
gtagatggtgtcaatgatcctgatgttctggcaattaatggagcttctgcagcacttgca
ttatctgatatcccatggaatggtcctattggtgcagtaagggtaggactggttgatgga
gaaactattatcaatccaactcgaaaacagatgtcttctagtgctttaaatttagttgtt
gctggagctcctcaaaatcaagttgttatgttggaagcaactgctgagaatatattgcaa
caagacttctgtcatgccatcaaagtaggggtgaagcatacccagcaaataattcaggga
atacaacaactggtgaaagaacgaggtgttgtcaagagaactgttcagaagttgtttgtt
gctcctgaagagattgtggaatgtgcaaagaaacttgcttttaacaagatctatgcagtg
ttcacagactctagccatgataaaatttctagagatgaagcaattaacaagataaggctt
gaaacagaagaacagctgaaagaaaaatttccagaggctgagccttatgaaatcctggaa
tctttcaatgtggtttcaaaggatatttttagaaatcttgttctgaatgaatatagaagg
tgtgacgggagagatttgacttccctcagagatattaaatgtgaagtgaacatgtttaaa
atgcttcatggatcagcgttatttcagagaggtcaaacacaggttctctgtacagttaca
tttgactctatagaatcaagtgtaaaatcagatcttatttcaacagcagtgagtggaata
aaagataaaaacttcatgctgcattatgagtttcctccttatgcaactaatgagattggc
aaagttactggtatgaacagaagagaacttggacatggtgcactggcagaaagagctttg
aaaccaattattccccaggatttcccattcacaatacgagttacttctgaagtcttggag
tcaaatggatcctcttcaatggcttctgcgtgtggtggaagtttggcattaatggatgca
ggagttccagtatcaagtgcagtggcaggtgtagcaataggtctcattaccaaatgcagt
ctggaaaaaggagatattgaggactaccgtttgctgacagacatcctgggaattgaagat
tactatggtgatatggatttcaagatggcaggtactaataaaggagtaactgccttgcag
gttgatctgaaactgccaggaataccaataaaaattgtaatggaagctattcagcaagct
acagctgcaaagagggagattttacaaattatgaatcaaacgctggcaaaacccagacct
aacagaaaagaaagtggaccggttgtagaaactatccacgttccattatcaaaaagatta
agattcgttggtcctggggcctataatttgaaaaaacttcaagcacagactggcgtaact
gtaagtcagctggatgaagagacgtattctgtgtttgcccccacacccagtgctatgcat
gaagcaagagaatttatccgtgaaatctgcaaagatgatcaggaagttaatttggaattt
ggtgcagtttatacagccacgataactgaaataagagattctggagtgatgataaaattg
tatccaaacatgacaccagtgttacttcataattcacaacttgatcaaagaaagattaaa
catcctagtgccctgggattagaagttggacaagaaattcaggttaaatactttggacgt
gatccgactgatggtagaatgaggctttcacgtaaaattctacagtcaccagccacaact
gtgcttaaaaccctgactgacaaaaccagtattgtcctgggaggtaccgttccacagtca
tctacttcatcccagtga
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