KEGG   Gavia stellata (red-throated loon): 104254869
Entry
104254869         CDS       T08384                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
gste  Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:gste00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gste03036]
    104254869 (KDM4A)
Enzymes [BR:gste01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     104254869 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     104254869 (KDM4A)
Chromosome and associated proteins [BR:gste03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    104254869 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H PHD DUF7141 LBR_tudor DUF4537 Rad9_Rad53_bind 53-BP1_Tudor Tudor_5 AMP-binding_C_2
Other DBs
NCBI-GeneID: 104254869
NCBI-ProteinID: XP_009807066
LinkDB
Position
Unknown
AA seq 998 aa
YDDIDELVIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRRIANSDKYCTPRYTDFEDLE
RKYWKNLTFNAPIYGADVNGTLYDKHVDAWNIGRLNTILDIVENESGITIEGVNTPYLYF
GMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFL
RHKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIE
YGKQSVLCSCRKDMVKISMDVFVRKYQPDRYKLWKAGKDVTVIDHALPTPEAAEFLKGDL
MQKVKNGKQCAEEMETGGMCKEEVDGDETKSIPKHRIGTKRHRVCLEVPQEVSESEAFPK
EELSSMQYEADMTEPPERPTSELVRQGEQGLKLPDSAKFEELKTVKLEEEEEEEQEAAAL
DLSISHASNSTSILTTSKQSATSSIQPSSPVYSGSSDSETTDLLAKRTLPGPAGVLTVHS
YARGDASGSDNEQTSGKKASATASVNEQELAEVAKEYISSMKESKKSKGRRQPLSKLPRH
HPLLVKDCISDDEASEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEYNRTMAQQSP
YCAVCMLFQTYQAECGGNSQNAGVTPTAVGGKIRTKPLIPEMCFTTTGCSTDLNLSTPYL
EEDGTSVLITCKNCHVCVHASCYGVSPDKATEDWMCSRCTENALEEDCCLCSLRGGALQR
ANDDKWVHVMCAVAVLEAKFVNIAERSPVDVGKIPLQRFRLKCIFCKKRRKRIAGCCVQC
SHGRCPTSFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPSQAERAKAALQDLSPGQIVI
SKHKNGRFYQCEVVSLAKETFYEVNFDDGSFSDNLYPEDIVSRDCLQLGPPAEGEVVQVR
WTDGQVYGAKFVASHAIQMYQVEFEDGSQLMVKRDDVYTLEEELPKRVKSRLSIASDMRF
TEIFAEKEVRQERKRQRVINSRYREDYIEPALYRAIME
NT seq 2999 nt   +upstreamnt  +downstreamnt
gctacgatgacatcgacgagctcgtcatcccagcgcccatccagcaggtggtgacggggc
agtccgggctcttcacgcagtacaacatccagaagaaggccatgacggtccgcgagttca
gaagaatcgccaacagcgacaagtactgcacaccccgctacacggacttcgaagaccttg
aacgaaaatactggaagaaccttacattcaatgcccccatctatggtgctgatgttaatg
gcacactttatgacaagcatgtagatgcatggaatattggcagattgaacaccatcctgg
atattgtggagaatgaaagcggcataaccattgaaggagtgaatactccttacctatatt
tcggcatgtggaaaacttcctttgcttggcatactgaggacatggatctctacagtatta
attacttgcattttggggaacccaagtcatggtactctatacctccagagcatgggaagc
gactggaaagacttgcaaaaggcttctttccaggaagtgcccaaagctgtgaagcgtttc
tccgtcacaagatgaccctcatctctccatcaattctgaagaaatatggcatcccatttg
ataaggtgacacaggaggctggagagtttatgataacctttccttatagctatcatgctg
gctttaatcatggctttaactgtgctgaatctaccaactttgctactcttcggtggattg
agtacgggaagcagtctgtactgtgctcgtgtcggaaggacatggtgaagatctccatgg
acgtgtttgtgaggaagtaccagccagatcgttacaagctttggaaagccgggaaggacg
tgactgtcattgaccatgctcttccaaccccagaggcggcagagttccttaaaggggatc
tcatgcaaaaagtcaagaatgggaaacagtgtgctgaggaaatggaaacaggagggatgt
gtaaagaggaggtagacggggatgagacgaaaagtatccccaagcatcgcataggaacaa
aaaggcacagggtctgcctggaagtgcctcaggaggtgagtgagagcgaggccttcccga
aggaggagctgagctctatgcaatatgaagcggacatgacagagcctcctgagagaccta
cgagtgaacttgtgcggcaaggtgaacaagggctcaagcttccagactctgccaaatttg
aagaactgaaaacggtgaagcttgaggaggaagaagaggaagagcaagaagcagctgcat
tggatctctccatttcacatgcttcaaattccacttcaattttgacaacgtcgaagcaga
gtgcaacttccagcatccagcccagctcgcctgtgtattctggttcttctgactctgaaa
caactgatctgttggcaaaacgaactcttcctgggccagctggtgtgcttacagtccaca
gctatgctagaggggatgccagcggatctgacaatgaacagacttcaggaaagaaagcca
gtgccaccgccagtgtgaatgagcaagaactggcagaggtagcaaaggagtacataagct
caatgaaggagagtaagaagtccaagggtcgtcgccagccgttgagcaagctcccacgcc
atcaccccctcttggttaaagactgcattagtgatgatgaggcatcagagcaactaactc
ctgaagaagaggctgaggagacagaagcatgggccaagccacttagccagctgtggcaga
atcggccaccaaattttgaagctgaaaaagaatacaataggaccatggctcagcagtctc
cgtattgtgctgtttgtatgctcttccagacatatcaggcagagtgtggaggcaacagtc
aaaacgctggagtaactccaactgctgtgggtgggaagatccgaaccaaacccctgattc
ctgaaatgtgctttactacaactggctgcagcactgatctcaatctttcaaccccctact
tagaggaagatggaaccagtgtactcatcacctgcaagaactgccatgtctgtgttcatg
caagttgttatggtgtatcccctgacaaggccactgaagactggatgtgctctaggtgta
cagaaaatgccttagaagaggactgctgtttgtgttcattacgaggaggagcactgcaga
gagccaatgatgacaagtgggttcatgtgatgtgtgctgtagctgtactggaggcaaaat
ttgtgaacattgcagaacggagtcctgtagatgttggcaaaatccctctgcaacgtttca
gactgaaatgcatcttctgcaagaagcgaagaaagagaattgcaggttgctgtgtacagt
gctcacatggtcggtgtcccacatcctttcatgtcagctgtgcccaagcagcaggagtca
tgatgcagcctgatgactggccatttgttgtcttcattacctgcttcaggcataagattc
catctcaggcagagcgagcaaaagctgcactccaggatctgtcacctggacagatagtca
tcagcaagcacaagaatggtcgcttctatcaatgtgaagtggtcagccttgcaaaggaga
ctttctacgaggtcaactttgatgatggttccttcagtgacaacctgtatccagaagaca
ttgtgagtcgagactgtcttcagttaggtccccctgctgaaggggaagttgtgcaggtga
gatggacagatggacaagtttatggagccaagtttgttgcatcgcatgccatccagatgt
accaggtggaatttgaagatgggtcacagctgatggtgaaaagggatgatgtgtatactc
ttgaagaggagcttcctaagagagtgaagtcaaggctgtcaatagcttcagatatgcgct
tcacggagatcttcgcagagaaggaggtcagacaagagagaaagagacaaagagtgatca
attcacgctaccgtgaagattacattgaacctgcgttgtaccgggccatcatggagtaa

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