Gavia stellata (red-throated loon): 104254955
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Entry
104254955 CDS
T08384
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gste00535
]
104254955
04091 Lectins [BR:
gste04091
]
104254955
Proteoglycans [BR:
gste00535
]
Cell surface proteoglycans
Others
104254955
Lectins [BR:
gste04091
]
C-Type lectins
Others
104254955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
104254955
NCBI-ProteinID:
XP_009807164
LinkDB
All DBs
Position
Unknown
AA seq
1414 aa
AA seq
DB search
HFPCPSLQARLQLGSEEVMLQSPAELQLNNLAVHDVELLVEDGRMTLTIDGLFNSSVDVT
GPVRELDIXGGTGSLDLPYLAEASSPFRGCLHLVTFNGLDVLSPLSSDGSSKIFHRVQEG
CSTQFSAEPEDPFGFLGPHSYIAFPTWDAREEATIEFVITTSITQAPLIYHAGLENDFFY
LEISNGRLRGFVEKGNGIIVLHNNVFISDEQQHYVKVYTDIHKFEILIDYYASSTSNRGI
NNYLDLQGNLFVGGMNEKALQSLREHHLAFSSVWTMTNNSFVGCLEDLRINLQRRSLQDA
VITKDITSGCGKQEHYWDYDEAYEQDEAPTSPPPDVWLGAPGLVVEPCRPDNSFPPAFAN
ISRLLHVSPLIVSEGGMAYLEWKHAQPTVDLSLANIRQSQILFSITNDPRHGQLELDIPG
SRSRRKFTLLDIVNRKVRYVHDGSEGPMDQLMLEVTVTAQQGVPECLRQGQIYLLPIMIN
PINDAPQVIFPHGNHMTILKHTQKHLTTDILQVLDDDTSCDELEFQLHGGQQMEEGYVEY
DFHPGVPIEEFSCRDLEAGNIVYVHQSGTNLQLTLQVSDGTVPSPIATLRILAIDPDIRL
HNNTGLSISQGGAARITTANLSVETNAVKQRVAILYVLTEPLSYGEVQKQGSMGGEWKKV
ESFHQQDLEQGRVQYFSTDPEHRLEDVVEVVRFKVQVGQKVLQNNTFLIRIKRATIKMRT
MVPLQMKNKRHRNITSKELEAMLEDPNSAPVPFHYMIIQAPKKGNLELLGNRLTEGFGFT
QDDLQRNHLSYSATIRNSQQAEDTFQFRVRAGEQHSPIYTYTISIGGDPDAPALTNILLT
VPEGGQAVISKDHLFVQSMNSMDYIYEVIEGPAHGRLAWAASHGWASREEITEFTNDDIL
HRRLLYQHDDSETLEDDIPFVAIRQGEGSTEPEAEEVRGVFRVSIQPVNDHIPVQVVNKV
FSVVRNGQHLLTTDDIAFTDKDSGFSDTQLVLARKDILFGSIVSVDDRSHQVYRFTQDDL
RKKKILFVHSGADRGWIQLQVSDGLHQTTALLEVQASDPYIKIVNNTGLVIHQGSRGSID
SSVLSLETNMDIRSDEEIRFLITTPPRWGTVLRGEQPVMAFSQRDLLAGEISYRHNGSRN
TRDELQFTVEANEVAVEDTLAISVFLDTHPSPLRIVNHKEIHVFQGEAAGIKEEYLLVTH
EEFPPQDIVYLVSSPPASGFLAMLQHSRDSNEQPSLDPIQSFTQEDINNGRVLYLHSKPD
EERDQFVVDITASSADPLEGVVVSLAVLPITVPLDVRNITVPGGGSVTLSTGILNIPNAY
FTALGMEFKVLEPPRFGTLLRSEQPEDGGLPSFTWSEVENQQIQYRQDXAXXXXXPLSAN
APERVRRSQPRTRFITILPRSSKGPRLRVNAGLQ
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
cattttccatgtccttccctgcaggccaggctgcagctgggctcggaggaggtgatgctg
cagtccccagcagagctgcagctcaataacctggcggtgcatgatgtggagctgctggtg
gaagacggcaggatgacactgaccatcgatggcctcttcaacagctccgtggacgtcaca
ggacccgtacgggagctggacatcnntggtgggacaggcagcctcgacctgccgtacctc
gccgaggccagctcacccttcagaggttgcctccacttagtgacattcaacggcctggat
gtcctctccccgctgtcctctgatggcagctccaagatcttccaccgggtccaggaaggg
tgcagcacacagttctctgcagagcccgaggaccccttcgggttcctggggccacactcc
tacatcgcgtttcccacgtgggatgcaagggaggaagcgaccatcgaatttgtgataacg
acgagcatcacccaggcacctctcatctaccacgcagggctggagaatgacttcttctac
ctggagatctccaacgggcgcctgagagggtttgttgagaaggggaacggcatcatcgtc
ctgcacaacaacgtcttcatcagcgatgagcagcagcactatgtcaaagtctacacagac
atccacaagtttgagatcctgattgattactacgcctcatccacgtccaaccggggcatc
aacaactacttggaccttcagggaaatctcttcgtcggaggtatgaatgaaaaagccttg
caaagcctgagggagcaccatctggctttcagctctgtgtggaccatgaccaacaactca
tttgtcggctgcttggaggacctgcggataaacctgcagaggaggagtctgcaggatgct
gtgatcacgaaggacatcacatcaggctgtggaaagcaggagcactactgggactatgat
gaggcgtacgagcaggatgaggcacccacctccccacctccagatgtctggttgggagca
ccgggcctggtggtggaaccatgccggccagacaacagcttcccgcccgccttcgccaac
atcagcaggctgctgcacgtcagcccgctcattgtctctgaaggaggcatggcctatctg
gagtggaaacatgcccagccaacggtagacttgagccttgcaaacatccggcagtcccaa
atcctctttagcatcaccaatgaccctaggcatggccagctggagctggacattcctggg
tccaggagcagaaggaagttcaccttgttggacattgtgaatcggaaagtcagatacgtc
cacgatggctccgaggggcccatggaccagctgatgctggaggtgacagtgaccgcccag
caaggggtcccagagtgcttgcggcaggggcagatatacctgctgcccatcatgatcaac
cccatcaatgatgccccacaggtgatctttccccatgggaaccacatgacaatcctgaag
cacacgcagaaacaccttaccacggacatcctgcaggtcctagatgatgatacatcctgt
gatgagctcgaattccagctgcacggtggtcagcagatggaggagggttatgtggagtat
gactttcaccctggagtgcccatcgaagagttctcctgcagggacctggaagcaggcaac
atagtttacgtgcaccagagcggaacaaacttacagctcaccttgcaggtgagcgacggc
acagtcccaagccccattgccaccctgaggatcctcgccattgatcctgacatccgcctg
cacaacaacaccggcctctccatctcccaaggaggggctgcacgcattaccacagccaac
ctgtcagtggagactaacgccgtgaaacaacgggttgccatcctgtatgtcctcacagag
cccctaagctatggtgaagtccagaagcaagggagcatgggaggggaatggaagaaagtc
gagtccttccaccagcaagacctggagcaagggcgcgtccagtattttagcacagacccg
gagcaccggctggaagatgttgtggaggtggtgagattcaaagtccaggtggggcagaag
gtcttgcaaaacaacacttttctcataaggattaaaagagccaccattaagatgaggacc
atggtccccctccagatgaagaacaagcggcacagaaatatcaccagtaaggagctggag
gcaatgttggaagatccaaactctgccccagtccccttccactacatgataatccaggct
cccaaaaagggaaacctggagctgctcggcaacaggctgaccgaaggctttggatttacc
caagacgatctgcaaagaaaccacctgagctacagcgcgaccatcaggaactctcagcaa
gccgaggataccttccagtttcgcgtccgcgctggcgagcagcactctcccatctatacc
tacacaatcagcattggtggggatcctgatgcaccagccctgaccaacatcctcctgact
gtgccagaaggggggcaagccgtcatctccaaggaccacttgtttgtgcagagcatgaac
agcatggactacatctacgaagtgattgaggggccagcgcacgggaggctggcctgggct
gcgtcccacggctgggcctccagagaggagatcacagagttcaccaacgacgacatcctc
caccgccggctgctgtaccagcacgacgactccgagacgctggaggacgacatccccttc
gtagcgatcaggcagggcgagggcagcactgagcctgaggcggaggaggtgagaggtgtt
ttcagggtctccatccaacccgtcaatgaccacatcccggtccaggtggtgaacaaggtc
ttcagtgtggtgcgcaatgggcagcacctgctgacaacagatgacatcgccttcaccgac
aaggactctggcttctccgacacgcagctggtgctggcaaggaaggacattttgtttggc
agcatcgtgtccgtcgatgacagaagccaccaggtctatcgcttcacacaggatgacttg
aggaagaagaagatcctctttgtccattcgggggctgaccggggctggatccagctacag
gtctcagatggcctccaccaaaccacagccctcctggaagtacaggcatcggacccctac
atcaaaatagtcaacaacactggtctggtcatccaccaaggcagccgagggagcattgac
tcctctgttctcagcctggagaccaacatggacatcaggtcagatgaagagatacggttc
ctgataacgacccccccgaggtgggggactgtgctgagaggggagcagccggtcatggcc
ttctcccagagggacctgctagcgggagagatctcctaccgccacaatggaagcaggaac
acccgagatgagctccagttcactgtagaagcgaacgaggtggcagtggaggacacgctg
gccatcagcgtgttcttggacacccatcccagccccctgcgcatagtcaaccacaaggag
atccacgtcttccagggggaagcagctgggatcaaggaggagtacctactggtgacccac
gaagagttccctccccaagacatagtctacctggtgagcagccccccggcctccggcttc
ctggcgatgcttcagcacagccgagactcgaacgagcagcccagcctggaccccatccag
tccttcacccaggaggacatcaacaacggcagagtcctctacctccactccaaaccggat
gaggagcgtgaccagtttgttgtggacatcacggccagcagtgcagacccactcgaggga
gtggtggtgagcctggctgtgctccccatcaccgtccccctggacgtccgcaacatcacg
gtgccgggaggtggctctgtcaccctctccacgggcatcctcaacatccccaatgcctac
ttcacggctctcggcatggagttcaaggtgcttgagcccccccggtttggcaccctcctg
cgcagcgagcagcccgaggacggcgggctgcccagcttcacctggagcgaggtggagaac
cagcagatccagtacaggcaggatnnggcnnnnnnnnnnnnnnnncctctgtcggccaac
gcccccgagcgggtccggcgtagccagcccaggacccgcttcatcaccatcctgccccgc
agctccaaggggccccggctgagggtcaacgccgggctgcag
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