KEGG   Gavia stellata (red-throated loon): 104255028
Entry
104255028         CDS       T08384                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
  KO
K10140  DNA damage-binding protein 2
Organism
gste  Gavia stellata (red-throated loon)
Pathway
gste03420  Nucleotide excision repair
gste04115  p53 signaling pathway
gste04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gste00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104255028 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104255028 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    104255028 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gste04121]
    104255028 (DDB2)
   03400 DNA repair and recombination proteins [BR:gste03400]
    104255028 (DDB2)
Ubiquitin system [BR:gste04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104255028 (DDB2)
DNA repair and recombination proteins [BR:gste03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104255028 (DDB2)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_EML Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_WDR19_1st EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR3_2nd WD40_RFWD3 Beta-prop_TEP1_2nd Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 104255028
NCBI-ProteinID: XP_009807263
LinkDB
Position
Unknown
AA seq 515 aa
MAPVNQPKGKKHERAHEPWPEEAKSAGKRKPDYEELGNEPLAKRLFVRKTSKPPEKIGWS
GGGSVVRNNRVLFHQLERQCSIVHYVYQNMLGGSIRAQLRQCLQLPFLRSLASYRLFRTA
SPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGPGDSLGDIKFSPY
EAVKLYVASGDGTLSLQDLEGRAVQVISRAPDCGHEYHNVCCWYCSVDVSASCRAVVTGD
NVGNVVLLSTSGEEIWKLKLHRKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKNKMN
FLHLLPHDKPVNAAYFSPTDGAKLLSTDQRSEIRVYSSSDWTKPQHLIPHPHRQFQHLTP
IKATWHPRYDLIVAGRYPDPKFPGYTVNELRTVDVFDGNTGEMVCQLHDPNASGIISLNK
FNPMGDTLASGMGFNILIWSREEMVAKKQEHLLKAMTEQGIGSWSLSRRGGQRQANPGTS
KLKAKLLSWELEETRTKTNDSKSQGRKRKGKDLEN
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggctccagtgaaccagccaaagggcaagaagcatgagagggcccatgagccttggcca
gaagaggcaaaatcagctgggaagaggaaacctgactacgaggaactagggaatgagcca
ctagcaaagaggttgtttgtgagaaaaacatccaaacccccagagaaaatcggttggagt
ggaggtgggtccgtggtgagaaacaacagagtccttttccatcagctggagcggcagtgc
agcattgttcattatgtctaccagaacatgctgggaggctctattcgggcacagctcagg
cagtgtctgcagctgcccttcctgcgttctcttgcctcataccgcctctttcgaacagca
agtccctttgacaggagagtgacatgcctggaatggcatccaacacaccccagtactgta
gctgttggttccaaaggtggagacatcatcctttgggactatgaagtacttactaaaacc
tgcttcataaaagggaaagggccaggagattctctcggagacatcaagttcagtccttat
gaggcagtgaagctttatgtggcatcaggggatggcaccctaagtctgcaggaccttgag
ggcagagcggtgcaggtgatctcccgtgccccggactgtggccatgaataccataatgtt
tgttgctggtactgcagtgttgatgtttctgcaagctgccgtgctgtggtgacgggtgat
aatgtgggcaacgtggtcctgctcagcacttctggtgaagagatttggaagctcaaattg
cacaggaagaaagtgactcacgtggagtttaactctcgatgtgagtggttgttagccaca
gcatctgtggatcagacagtcaaaatctgggacctcagaaacatcaaaaacaaaatgaat
tttcttcatctgcttcctcatgacaaacctgtcaatgcagcttacttcagcccaacagat
ggtgccaagctcctgagcacagaccagcgcagtgaaatcagggtttactcatcttcagac
tggaccaagccacagcatctgatcccacatccacatcggcagtttcagcacctcacacct
attaaggcaacatggcatcctcgctatgacctcattgtagcaggtcgatacccagaccct
aagttcccaggctacacggtgaatgagctacgaactgttgatgtatttgatggaaacacg
ggggagatggtttgtcagctccatgatccaaatgcttctggtatcatctcgctcaataaa
tttaaccctatgggagacacgctggcttctggcatgggctttaatattctgatctggagc
cgggaagagatggtggccaagaagcaagaacatcttttgaaagccatgacagaacagggg
attggaagctggagtttgtccagacgtggagggcagaggcaggccaaccctgggacaagc
aaactcaaagctaagttactgtcttgggagctggaggagacgagaacaaaaaccaacgat
tctaaatcacagggaaggaagcgaaaagggaaggatctagagaactga

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