Gavia stellata (red-throated loon): 104255063
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Entry
104255063 CDS
T08384
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03440
Homologous recombination
gste03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104255063 (TOP3A)
03460 Fanconi anemia pathway
104255063 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gste03032
]
104255063 (TOP3A)
03400 DNA repair and recombination proteins [BR:
gste03400
]
104255063 (TOP3A)
Enzymes [BR:
gste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104255063 (TOP3A)
DNA replication proteins [BR:
gste03032
]
Eukaryotic type
DNA Topoisomerases
104255063 (TOP3A)
DNA repair and recombination proteins [BR:
gste03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
104255063 (TOP3A)
FA (Fanconi anemia) pathway
104255063 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
104255063
NCBI-ProteinID:
XP_009807307
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MALQRIRKVLCVAEKNDAARGIADLLSNSRMRRREGFSKFNKIYEYDYQMFGQNVTMVMT
SVSGHLLAHDFKLPFRKWHSCNPLALFDAEIEKYCPENYMDIKRTLEREVQQCQALVIWT
DCDREGENIGFEIIHVCKAVKPNLQIFRARFSEITLHAVRTACENLTQPDQKTSDAVDVR
QELDLRIGAAFTRFQTLRLRKIFPDILADQLISYGSCQFPTLGFVVERFKAIQAFVPEAF
YKIKVTHDHEDGSVVFNWKRNRLFNHTACLVLYQMCMEDPVATVVEVGSKPKSKWRPLPL
DTVELEKLASRKLKINAKETMRIAEKLYTQGFISYPRTETNIFPKELNLSALVQQQTQDP
NWGAFAQRILDQGGPTPRSGTKSDQAHPPIHPTKYTASLQGNEQRLYEFIVRHFLACCSQ
DAKGQETTVEIDIANERFIAQGLMILARNYLEVYPYEKWSDKVIPLYQKGSRFQPTTVEM
VDGETSPPLLLTEADLIALMEKHGIGTDATHAEHIETIKTRMYVGLTADQRFLPGHLGMG
LVEGYDSMGYEMSKPDLRAELEADLKLICEGKKDKSAVLQQQVQKYKQVFIEAVARANKL
DQALAQYFGEATEIAEQEDVYPAMPVSVRKCPQCNNDMVLKTKKNGGFYLSCTGYPACKT
AVWFPDFVLDVARDESVCAVCKPHPVHRLKFKFKRGSVPPMMPLEFVGCIGGCDEMLKEL
LDLKYLHRSSQPASSASQQANHLQVNNSFNRASGENRHVRGTTNLAPGHLLSLSSTRTPR
PAPSAAPDDGNNAVVCNCGNEALLLTVRKEGPNQGRQFYKCSAGTCNFFLWADQQSDDRS
NATPRGSALPQPFAGRGPAGFQRSGGGRGPELFGSNSSNSGGSTVCKCDQPAVTRTVQKD
GPNKGRQFHTCSKPREQQCGFFQWADENVAPGPSGDVSLNHFGNSGNSRGLGSKAKRPSS
LSSEATAKKPRTCSICHQPGHTRKTCPQTR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggctttgcagaggatccggaaggtcctgtgcgtggctgagaagaatgatgctgcccga
gggattgcggatctgctctccaacagcagaatgcgacggagagaagggttttccaagttc
aacaagatctacgaatacgactaccagatgttcggccagaatgttactatggtgatgacg
tccgtgtcgggacacttactggctcatgattttaagctgccgtttcgcaaatggcatagc
tgcaaccctctagctctttttgatgctgaaattgagaagtattgccctgaaaattacatg
gatatcaagagaacccttgaacgagaagtccagcagtgccaagctttggtgatctggact
gactgcgatcgagaaggagagaatattggctttgagataattcacgtttgcaaagctgta
aagccaaacctccagattttccgagcccgtttttctgagattacgcttcatgctgtcaga
acagcctgcgagaaccttacccaaccagatcaaaaaaccagtgatgccgttgatgtcagg
caggagctggacctcaggataggtgctgccttcaccagattccagacgctgaggctccgg
aagatcttccctgatattttagcagatcagctgatcagctatggtagctgccagttccca
acgctggggtttgtagttgaacgctttaaagccatccaggcctttgttcccgaagccttc
tataaaataaaagtgacacatgatcatgaagatggcagtgtggtcttcaactggaagagg
aaccggctctttaatcacacagcgtgccttgtcctttaccagatgtgtatggaggatcca
gtagcaactgttgttgaggttgggagcaagccaaagagtaaatggaggcccctgcccctg
gacactgtggaacttgagaagctggcttcccgcaaactgaaaataaacgcaaaagaaacc
atgagaatagcagaaaaactctatactcaagggttcatcagctacccccgaactgagacc
aacattttccccaaggagctgaacctctctgccttagtacagcagcaaacacaggacccc
aactggggagcatttgcacagaggattttggatcagggtgggccaacccctcggagtgga
accaaatcagatcaggctcaccctcccattcaccccacaaaatacactgccagcctgcag
ggcaatgagcagagactatatgaattcatcgtgcgccatttcttggcttgctgctctcaa
gatgccaagggacaggaaacaactgtggagatcgacattgctaatgagcgattcattgct
caaggactaatgatcctggcccgaaattatctggaagtctatccttatgagaagtggagt
gataaggttatcccactgtatcagaaagggtctcgctttcagcccactacagtggagatg
gtggatggggaaaccagccctccattgctcctcacagaagcggatctcattgctctcatg
gagaaacatggcattgggactgacgccactcatgctgagcacattgagacaattaagacg
cggatgtatgtgggtcttacagcagatcagcgcttcctcccaggccacctgggcatgggg
ttggttgaaggctatgattccatgggctatgagatgtccaagcctgaccttcgagctgag
ctggaagctgatctgaaactcatctgtgaggggaagaaagacaaatctgcagtgttgcag
cagcaggtccaaaagtacaagcaagtcttcatcgaagctgtggccagagccaacaagttg
gaccaggccctggctcagtattttggagaagccacagaaattgcagagcaagaggacgtc
tacccagcaatgcccgtttccgttcggaagtgtccacagtgcaacaatgatatggtcctg
aagactaagaagaatggcgggttctatctcagctgcacgggctatccagcatgtaaaact
gcggtctggtttcctgattttgtgctggatgtggccagggacgagagcgtctgtgctgtg
tgtaaaccacatccagttcacagactgaagtttaaattcaagagaggcagcgttccaccc
atgatgcccctggagtttgttggttgcatcggaggctgtgatgagatgctaaaagagctc
ttggacctgaagtatttacacaggtcatcccaacctgcatcgtcagccagccagcaagct
aatcacttgcaggtcaacaactcctttaatagagctagtggtgaaaacaggcacgtgagg
gggaccacaaacctggcaccaggacatctactctccttgagctcaacgagaacacctagg
cctgctccttcagctgctccagatgatgggaataacgcagtggtgtgcaactgcgggaac
gaagccctgctgttaactgtgcgcaaagaagggcccaatcaaggcaggcagttttacaaa
tgcagcgccggtacctgcaacttttttctctgggctgatcagcagtcagacgacagaagc
aacgcgactccacggggctctgcgctaccccagccctttgcaggaaggggcccagcagga
tttcagcgctcaggaggagggagaggcccagagctctttggaagcaacagctccaactca
ggaggcagcacagtctgcaagtgcgaccagccagctgtcacgcgcaccgtccaaaaggat
gggcccaacaaagggcgacagttccacacctgctctaaaccccgagagcagcagtgcggc
ttcttccagtgggcagatgaaaacgtggcaccagggccttctggagatgtctctttgaac
cactttggcaacagtggaaactcaagagggttgggaagtaaagccaagagaccaagcagt
ctctcctcagaagccaccgccaagaaaccacggacctgtagcatttgccaccagcctggc
cacactaggaaaacctgccctcaaacccgctga
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