Gavia stellata (red-throated loon): 104255146
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Entry
104255146 CDS
T08384
Symbol
MBD4
Name
(RefSeq) LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104255146 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gste03036
]
104255146 (MBD4)
03400 DNA repair and recombination proteins [BR:
gste03400
]
104255146 (MBD4)
Chromosome and associated proteins [BR:
gste03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
104255146 (MBD4)
DNA repair and recombination proteins [BR:
gste03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104255146 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
MBD
Motif
Other DBs
NCBI-GeneID:
104255146
NCBI-ProteinID:
XP_009807431
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
PEGNKIRSKRALVEYFQKTGETTLKAEDFDFTAPYQRSSRVKRYSTKAARTVSENEDCHS
QEQGLSIQNGEEDRIRNVQTGNEHLEDITPTRESKDLIMKGINPEDCLKNKKKGAGQKST
QNKKTGKSSEKRNQDDTPNKRQRRVRNKQETECVQNKKFCRKIDACVADSQGVDDQNADP
MDAGKTRLRISTSRSDTQLRSVTTRSQRQLESLAEEERVETGSNDASSAKSEEKTNVLKI
GKETHRGNLGNQDFKSEADANVLQPCDKKNFTAVKMLPGIXESIPRTQVIRRKTSPYFSS
KYSKEAPSPPRRKAFRKWTPPRSPFNLVQETLFHDPWKLLIATIFLNKTSGKMAIPVLWE
FLKKYPSPEITRTADWKEMSELLRPLGLYELRAKTIIKFSDEYLSKQWKYPIELHGIGKY
GNDSYRIFCVNEWKE
NT seq
1306 nt
NT seq
+upstream
nt +downstream
nt
tcctgaaggaaataagataagatcaaaacgtgcacttgtggagtattttcagaaaactgg
ggagacgacgctaaaagcagaagattttgattttacagctccttatcagaggagttcgag
ggtgaaaagatacagcacaaaagctgcgagaactgtttcagagaacgaggattgtcacag
tcaagagcaaggcctcagtatacaaaacggtgaagaggatagaattcgaaatgttcagac
tggaaacgaacacctggaagacattacacccactcgtgaaagcaaagatttgatcatgaa
aggcataaacccagaggactgtttgaaaaacaaaaagaagggggcaggtcaaaaaagcac
tcagaataagaaaactggaaagagctcagaaaagaggaatcaagatgataccccaaacaa
aagacagagaagagtacgtaacaaacaggaaactgagtgcgttcaaaacaagaaattctg
tagaaagatagatgcatgtgtcgctgatagtcagggcgtggatgatcagaatgcagaccc
tatggacgcaggaaaaacacggttaagaatttccacgtcacggtcagacacacagctaag
gtcagtgacaactcgctcacaaaggcagttggagagcctagcagaggaggaacgtgtgga
gacaggttctaatgacgcatcttctgcaaaatctgaggagaaaaccaatgtattgaaaat
agggaaggagacacatcgagggaatttgggtaaccaggattttaaatctgaagcagatgc
taatgtcttgcagccatgtgacaagaaaaacttcacagcagttaaaatgctgccaggtat
ttaagagtctatcccacgaacacaagtgattaggaggaaaacgagcccatatttttcaag
taaatacagtaaagaagctcccagcccacctagaaggaaggccttcagaaaatggactcc
tccacgttctccttttaatttggtccaagaaacacttttccatgatccttggaaacttct
gattgcaaccatatttctcaataaaacttcaggtaaaatggcaattcctgtgctctggga
gttccttaagaagtatccttctcctgaaataaccaggactgcagactggaaagaaatgtc
agagctgctcagacctctcggcctctacgaactcagagcgaaaactatcatcaagttctc
agatgagtacctgagcaagcagtggaagtaccccatcgagctgcacgggatcgggaagta
cgggaacgactcctatagaatcttctgtgtcaacgaatggaaggag
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