Gavia stellata (red-throated loon): 104255284
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Entry
104255284 CDS
T08384
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104255284 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gste03021
]
104255284 (SMARCC1)
03036 Chromosome and associated proteins [BR:
gste03036
]
104255284 (SMARCC1)
Transcription machinery [BR:
gste03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104255284 (SMARCC1)
Chromosome and associated proteins [BR:
gste03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104255284 (SMARCC1)
PBAF complex
104255284 (SMARCC1)
GBAF(ncBAF) complex
104255284 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
DUF919
Motif
Other DBs
NCBI-GeneID:
104255284
NCBI-ProteinID:
XP_009807625
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
YLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLINYQVDPESRPM
AMGPPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNKEKPTDLQNFGLRTDIY
SKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPI
EDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVR
EEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKIDGAEEEKMETETD
GQPSEKVENKAESEIEEGDKVQEGENERNPEKEQDSEVTADTKPEEKEAEENKENVDASK
DKENEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKK
LEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQHSQNP
QQSHQHSSGPGMNPLGAPAHPGLLPHQQPPPYPMMHHQMPPPHPPQPGQMPGPGSMIPGQ
PMPGRMMPSVSANIHPAGGGPPPPGMSPMSGNLIGPRVPLAAPNGMYPPPAQPPPPAEGV
TPPPAGAPPASAAP
NT seq
1846 nt
NT seq
+upstream
nt +downstream
nt
atatctggcttaccgcaacttcatgattgacacatatcgcttaaaccctcaagagtattt
gaccagcactgcctgcagaaggaatctgactggagatgtgtgcgctgtcatgagagtaca
tgcttttctggagcagtggggtctcattaactaccaagtggatccagaaagccgtcccat
ggcaatgggacctccccctactcctcacttcaacgtgctggctgatacaccctctggact
gatgcctctccatatccgcactccccaggttccagctgctcagcagatgttgagttttcc
tgagaaaaacaaagagaagcctactgatctgcagaactttggacttcgcacagacattta
ctcaaaaaagactttagcaaagagtaaaggtgcaagtgctggaagagaatggacagaaca
agagacattgctgctattagaagctctggagatgtacaaagatgactggaacaaagtctc
agagcacgttgggagccgtacccaagatgagtgcattctccactttctgagacttccgat
tgaagacccctatttggagaactctgatgcgtctctgggcccgctggcttaccagcccgt
acctttcagccaatctggcaatccagtgatgagtaccgtcgcttttctggcatcggtggt
ggatccccgggtggcgtcagccgcagcaaaggctgcgttagaggaattttctcgagtcag
agaggaggtaccgctggagctcgttgaagctcatgtaaagaaagtacaggaagcagcaag
agcctctgggaaggtggatccaacatacggcctagagagcagctgcattgccggaacagg
tccagatgagccggagaaaattgatggagctgaagaagaaaagatggaaacagagacaga
tgggcaaccgtctgagaaggttgaaaacaaagcagagagtgaaattgaggaaggtgataa
agtacaagaaggagaaaatgagagaaatccagaaaaagagcaagatagtgaagtgactgc
agacaccaagccagaagaaaaggaggcagaagagaacaaggagaacgttgatgcaagcaa
agacaaagaaaacgaggctgggaagaagaaagtggaacatgaaatctcggaaggaaacgt
agctacagctgcagctgctgcccttgcctcagctgccaccaaagcaaagcacctagcagc
agtggaagaaagaaagatcaagtccctggtcgcccttttggtggaaacgcagatgaagaa
gctggagataaaacttcgccattttgaggagctggaaaccattatggacagagagaaaga
ggcattagagcagcagagacaacagttgctgacagaacgccagaattttcacatggaaca
gctgaaatacgctgaattaagggctcgtcagcaaatggagcagcagcacagtcaaaatcc
acagcagtctcaccagcactccagtgggcctgggatgaacccccttggggcaccagcgca
tccaggcttactgcctcatcagcagcccccgccgtaccctatgatgcaccaccaaatgcc
accacctcacccaccacagccaggtcagatgccggggcccggttcgatgatacctggaca
gcccatgccaggccggatgatgccaagtgtgtcagcaaacatccatccagctggcggtgg
tccccccccacccggcatgtcaccgatgtcaggaaatctaattggacctcgtgttcctct
agcagctccaaatggcatgtatccccctcctgcacagccgcctccgccagcggaaggggt
gaccccacctccggcaggagccccgccggcctcagccgctccctaa
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