Gavia stellata (red-throated loon): 104255645
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Entry
104255645 CDS
T08384
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03030
DNA replication
gste03410
Base excision repair
gste03420
Nucleotide excision repair
gste03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104255645 (RFC1)
03410 Base excision repair
104255645 (RFC1)
03420 Nucleotide excision repair
104255645 (RFC1)
03430 Mismatch repair
104255645 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gste03032
]
104255645 (RFC1)
03400 DNA repair and recombination proteins [BR:
gste03400
]
104255645 (RFC1)
DNA replication proteins [BR:
gste03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104255645 (RFC1)
DNA repair and recombination proteins [BR:
gste03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104255645 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_14
Rad17
AAA_22
BRCT_2
AAA_5
AAA_30
AAA_16
RNA_helicase
RuvB_N
AAA_17
AAA_18
AAA_33
AAA_7
nSTAND3
AAA_19
NTPase_1
Motif
Other DBs
NCBI-GeneID:
104255645
NCBI-ProteinID:
XP_009808071
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MAATPGGSDIGQDIRKFFGVVPPGKRQECESVKKSEKIKNGEGPSSGKKKGKETKVNNSP
SEDDSKQKRANKKKRIIYDTDSEEEVQSVKKSKKPSEKKAATSKLGKVLKQDPVVYISET
DEEDDFVNKRISLKPKENGTSAIGCPGTTTVKKEDVKPRAKSKPLSPVKQTPTSALDYFG
TSSVQRSEKKLVASKRKEPSQSRDSTLDDEAIARQLQLEEDSELERQLHEDEEFAKTLAM
LDETPQKKKARKDSGGEQTVLSIKSSPNVTEKYKQSERVKATNSTGEAKNCTVKQQTKSE
HSKGSHLSPQSSDGKIARELTDKTVPLKPSSKLVSLKQKETDEKEGGARSLVSKERTASG
REEKRTPKKEKISPKKAESVSPEDSEKKRINYQAYRSFLNREGPKALGSKEIPQGAENCL
EGLTFVITGVLECIERDEAKSLIERYGGKVTGNVSKKTSYLVMGRDCGQSKCEKASTLGT
KVIDEDGLFDLIRTMPGKKSKYELAAETEAKKAESRPKKTPQKAEAGKRNFSPFKREADN
KKYKSTPEKGDTVKSVRKEATAVRKLMDFKQQTEEKKEAPKPKGNLVSEINEDGTERLLW
VDKYKPVSLKAVIGQQGEQSCANKLLRWLRNWHKSTSEDGQAKTNKTGGKDDGSGFKAAL
LSGPPGVGKTTTASLVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSS
SVSGKHVLIMDEVDGMAGNEDRGGIQELIGLIRHTKIPIICMCNDRNHPKIRSLVHYCFD
LRFQRPRLEQIKGAMMSIAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSLT
YDEAKTDGSRAKKDIKLGPFDVVRKVFATGEEASRMSLIDKSDLFFHDYSLAPLFVQENY
VHVKPAAAGGNLKKHLVLLSRAADSICDGDIVDKQIRSKQNWNLLPTQAIYASVLPGELM
RGYMSQFPVFPSWLGKFSSTGKHDRIIQELAMHMSLRTQTCKRTVNMEYLSYLRDALVQP
LKDFGADGVQEAISFMDSYCLMKEDIENIMEISMWGGKPSPFSKLDPKVKAAFTRAYNKE
AHLTPYSLNSVKTSKRQSGSAVTLELNEDLNVEEIQSDEDEQDTVESDAMIKQKKAKSSK
LPKREKNEETTKKEGKRKEKTRH
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacccctggaggtagtgatattggccaggatatccggaaattctttggcgtt
gtacctcctggaaagcgacaagaatgtgagagtgtgaaaaagagtgaaaaaattaaaaat
ggtgaaggaccttcaagtggaaagaaaaagggaaaggaaactaaggtgaataattcaccc
agtgaagatgattccaaacaaaagcgagcaaacaagaaaaaaagaataatctatgataca
gattcagaagaggaggtgcagtcagtgaaaaaatccaagaagccatctgagaaaaaagca
gctacttcaaaacttggtaaagttctaaagcaggatcctgttgtttatatttcagagaca
gatgaagaagatgactttgtcaataaacgaatttccctgaaaccgaaggagaatgggaca
tcagcgatcggttgtccaggaacaactacagtgaaaaaggaagatgtaaagccacgagct
aaaagcaaaccattatctccagtgaaacagactcccacctctgcacttgattactttggg
acaagtagtgtccaacgatcagaaaagaaactggtagcaagtaaaaggaaagaaccttca
caaagcagagacagcacactagatgatgaggccattgccaggcaactgcagcttgaagaa
gattcagagctggagagacagctgcatgaagatgaagaatttgctaaaactttggccatg
ttggatgaaacaccacagaagaaaaaggctcggaaagattcaggaggagagcaaacagta
ttaagcatcaagagcagtcctaacgtgacagaaaaatataagcagtcggaaagagtgaaa
gcaacaaattcaacaggtgaagcgaagaattgcactgtgaagcagcaaactaaatctgaa
cattcaaaaggctctcatttatccccacaatcatctgatggtaaaatagcaagagagttg
acagataagaccgtgcctttgaaacctagctctaagcttgtgtctctgaaacaaaaagag
actgatgaaaaggaaggaggtgctcgaagtttagtatcaaaggaaagaactgcttcaggg
agagaagagaagagaacaccaaagaaggagaaaatttctcccaagaaggctgagtctgta
agccctgaggactctgaaaagaagcgaatcaattatcaagcctaccgaagcttccttaat
cgcgagggtccaaaagcgctgggttccaaagagatacctcagggagctgaaaactgcttg
gaaggcctgacattcgtaattacaggcgttctggagtgtattgaaagagatgaggccaag
tctctgattgaacgttatggaggaaaagtaactggcaatgtcagcaagaagacaagctat
ctggttatggggcgagactgtggccaatctaaatgtgaaaaggcatcaactttagggaca
aaagttattgatgaggatggcctgtttgatcttattcgaactatgccaggcaaaaagtcc
aaatatgagctggcggctgaaacagaggcaaagaaagcagagtcaagacctaaaaagaca
ccacagaaagctgaagctggaaaaaggaattttagccccttcaaaagggaagctgataac
aaaaaatataagtctactcctgaaaaaggagataccgtcaaatctgtcaggaaagaagcc
actgctgttcgaaagcttatggactttaaacagcagactgaagagaaaaaagaagcccca
aaacctaaggggaacttggtttctgagattaatgaagatggaacagagagattgctatgg
gtagataaatacaagcctgtgtctcttaaggcagtaatcggacagcagggtgagcaaagc
tgtgccaataaactgctgcgatggctacgaaattggcacaagagtacctcagaagatgga
caagcaaagaccaataaaactggaggcaaagatgacggtagtggttttaaagcagcatta
ctttctggtccacctggagttggtaaaactactacagcttctttggtttgtaaggaactg
gggtatagctatgtggagctgaatgccagtgacactcgcagtaagaacagtctaaaggaa
gtagttgctgaatcacttaacaacaccagcatcaaagacttctgttctggcacatcttca
tcagttagcgggaaacatgtattgatcatggatgaagtggatggtatggcaggcaatgaa
gacagaggagggattcaggagttgattggtttgattagacacacaaagatacccatcatc
tgtatgtgtaatgatcgcaaccatcctaaaattcgttccttggtccactactgttttgat
cttcgttttcagagacctcgtctagaacagattaagggtgccatgatgtctattgcattt
aaagaaggtttaaaaattccaccgcctgctatgcaagagataatcctggcagcaaatcag
gacatcagacaggttttacataatcttaatatgtggtgtgcaaaagataaatcgttgact
tatgatgaagctaaaacagatggtagcagagccaaaaaggatatcaaactgggccctttt
gatgtcgtccggaaggtttttgctactggagaggaggcttctcgtatgtctcttatagac
aaatcggatcttttcttccatgattattccctagcacctctctttgtccaagagaactat
gtacatgtgaaaccagctgctgctggaggaaatctgaaaaagcacttggtgctcttgagt
agagcagctgatagtatatgtgacggtgatatagtagacaaacagattcgtagcaagcaa
aactggaaccttcttccaacacaggctatttatgcaagtgttctcccgggggagctgatg
cgaggttacatgtcccagtttcctgtctttcccagctggctggggaaattttcatccaca
ggcaaacatgatcgtatcattcaagaactggcaatgcacatgagtctcagaacccagaca
tgcaaaaggacagtaaacatggaatatttgtcgtatttgcgggatgcacttgtccagccc
ttgaaagactttggagcagatggtgtacaagaagctatatcattcatggactcttactgc
ttgatgaaagaagatattgaaaatatcatggaaataagcatgtggggaggcaaacccagt
cctttttcaaagctggatcccaaggtcaaagcagcttttacacgtgcctacaacaaggag
gcacatctgactccatattcactgaactctgtcaagacatctaaaaggcagtcaggatct
gcagtgaccttagaactgaatgaagacctgaatgtggaagagatccaatctgatgaggat
gagcaagatactgttgaaagtgatgcaatgattaagcaaaaaaaggccaagtcttccaag
ctgccaaaaagagagaaaaatgaagaaacaacaaaaaaagaagggaaaagaaaagagaaa
acaagacattaa
DBGET
integrated database retrieval system
