Gavia stellata (red-throated loon): 104255738
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Entry
104255738 CDS
T08384
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gste01002
]
104255738 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gste04121
]
104255738 (VCPIP1)
Enzymes [BR:
gste01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104255738 (VCPIP1)
Peptidases and inhibitors [BR:
gste01002
]
Cysteine peptidases
Family C64
104255738 (VCPIP1)
Ubiquitin system [BR:
gste04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
104255738 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VCIP135_N
OTU1_UBXL
OTU
ubiquitin
Motif
Other DBs
NCBI-GeneID:
104255738
NCBI-ProteinID:
XP_009808200
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MGLSNYHCKLLAPILARYGMDKQTGKAKLLTEMNQGDIFDCSLLGDRAFLIEPEHVETIG
YGKDRSGSLIYLHDTLEDIKKANNSQECLIPVHVDGDGHCLVRALVGRELFWHALRENLK
KHFEENLSHYKALFHDFIDAAEWEDIINECDPLFVPPEGVPMGLRNIHIFGLANVLHRPI
ILLDSLSGMRSSGDYSATFLPGLVPLEKCMGKDGMLNKPICIAWSSSGRNHYIPLVGIKG
AALPKLPRKLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLMRLVAAMEEVFMS
KHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHRCLICGALSEHHVPPE
WLAPGGKLYNLAKSTHGQLRPDKNYSFPLNSLVCSYNPTKDVLVPDYSLSSLTACNWCHG
NLVRRVREDGSVSYLDGDRTNTRSTGGKCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVV
RETVYWFQYESDTSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDDY
TPVNIDGAHAQRADDVQQGQELESQLPTKIILTGQKTKTLHKEELNMSKAERTIQQNIAD
QASVMQKRKSEKLKQEHKGQPRTVSPGAVREGPSSAPATPTKTPYSPTSTKEKKIRITTN
DGRQSMLTLKCTTTFLELQESIAREFNIPPYLQCIRYGFPPKELLPPKEGMENEPVPLQH
GDRIAIEILKGKEEGRQSASAHSAHAVKHEDVAVTSKISSKELQEQVDKEMYSLCLLATL
MGEDVWSYAKGLPQLFQQGGVFYSIMKKTTGLADGKHCTFPHLPGKNFVYNAAEDRLELC
VDAAGHFPIGPDVEELVKEALSQVRAEATSRSREGSPSHGMLKLGSGGVVKKKSEQLHNI
TAFQGKGHSLGTASSSQQHDQRARETPLLRKHSTETDFSPSAKIEPSVFTAASGNSELIR
IAPGVVTMRDSRQLDPTLIEAQRKKLQEMVSSIQASMDRHLRDQNTEQSASVDLSQRKVE
AVSSTAKTGSFQAGLPESFSAPGGTEHLNTESTDGNMVNSVGTTFPARSKAQKGNSVEEL
EEMDSQDAGITNATEPMDHS
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgggcctctccaactaccactgcaagctcctggcccccatcctggcccgctacggtatg
gataagcaaaccggcaaagccaagctcctcaccgagatgaaccagggagacatctttgac
tgctccctcttgggtgaccgcgccttcctcattgagccggagcacgttgaaaccatcggt
tacggaaaggaccgctctggcagcctcatctacctgcatgacaccctggaagatatcaag
aaggccaacaacagtcaggagtgcctcattcctgtgcacgtggatggagatggccactgt
ctcgttcgggcgcttgttggcagggaactgttctggcatgctctgcgagagaatctaaag
aaacattttgaggagaatctgagtcactacaaggcgcttttccatgattttattgatgca
gcagagtgggaggacattatcaacgaatgtgaccctttgtttgttcctccagaaggtgtg
ccaatgggccttaggaatattcacatctttggtctggccaacgtgcttcaccggcctatc
atcctgttagactccttgagcggaatgcgaagctctggagattattcagcaacgttcctc
cctggtctggtacctctagaaaagtgcatgggaaaagacggcatgttgaacaagccgatc
tgcattgcatggagtagctcaggacgtaaccattatattcctctagttggaataaaaggt
gctgctttacctaagctgcctaggaagctacttcctaaagcctggggagttcctcaagat
ctcatcaaaaagtacatcaagttagaggaggacggtggttgtgttattggaggagacaga
agtttgcaagataagtacttgatgaggctcgttgctgcaatggaggaggttttcatgagt
aaacacggtatccatcccagtcttgtagctgatgtacatcagtatttctacagaaggact
ggtgtaatcggagtccagcctgaagaagtcactgcagctgccaaaaaagcagtgatggac
aaccgtcttcacaggtgcctcatctgcggggccctttcagagcatcatgttcctccagag
tggctggctcctggggggaaactctataacctggcaaaaagtacccacggccaactgagg
cctgacaaaaattacagttttcccctgaacagtttggtgtgttcttacaaccccacaaag
gatgtgctggtaccagactatagcctgagtagtttgactgcttgtaactggtgtcatggc
aacttagtgcgtcgtgtcagagaagatggatctgtttcatatttggatggagacagaact
aatactagatctacaggtggcaaatgtggctgtggattcaagcactactgggaaggtaaa
gaatacgataatctccctgaagcttttcctattactctagagtggggtggaagagtggtg
agagagacagtctactggttccagtatgaaagtgacacatctctgaacagcaatgtgtat
gatgtcgctatgaaacttgttaccaagcacttccctggtgaatttggtagtgagattctt
gttcagaaagttgtcaacacaatattgcatcaaactgccaaaaagaaccctgatgattat
acccctgtaaatatcgatggtgctcatgcccaaagagctgatgatgtacagcaaggacaa
gagttagagtcacaacttccaaccaaaattattttgactggccagaagacaaaaactttg
cacaaggaggagttgaatatgagcaaagctgaaagaactattcagcagaacattgcagac
caggcttccgtaatgcaaaaacggaaaagtgaaaaattgaaacaagagcataaagggcaa
cctaggactgtttctcctggggctgttcgtgaggggccatcatctgcacctgctacacca
acaaaaaccccatattctccaacatctacaaaagaaaagaaaattcgaataaccacaaat
gatgggaggcagtcaatgcttaccctaaagtgcacaaccacctttttggaactacaggaa
agcatagcgagagaatttaatattcctccgtatttgcagtgtattcgctatggttttcct
cctaaagagcttctgcctcccaaagaaggcatggaaaatgagcctgttcctttgcagcat
ggtgacaggattgcgatagaaatcctgaaaggtaaggaggaaggcaggcagtctgcttca
gcacactcggcccatgccgtgaagcatgaagacgttgctgtgactagtaaaatctcatca
aaggaactgcaagagcaagtcgataaggagatgtattctctctgtcttctagcaacacta
atgggagaagatgtctggtcttacgcaaaggggcttcctcaattgtttcagcagggtgga
gtattctacagcataatgaagaaaaccacaggtttggctgatggcaagcactgtactttt
ccacatctgcctggtaaaaactttgtgtacaatgcagcagaagacagattagagctgtgt
gtggatgctgctgggcacttccctattggtcctgatgttgaagagttggttaaagaggcc
ttaagtcaagtgcgagcagaagctacttcaagaagcagggaaggaagtccttcacacgga
atgctgaagctgggtagtggtggagtagtgaagaagaaatctgaacaactacataacata
actgcttttcagggaaagggccattccctaggaactgcatctagtagtcaacaacatgat
caaagagccagggagacaccacttttaagaaagcatagcacagaaacggacttcagtcct
tctgctaaaattgagccttctgtattcacagctgcttctggtaacagtgagcttatccga
attgctccgggagttgtgacaatgagagacagcaggcagcttgaccccactttgattgag
gcacagagaaaaaagttgcaggaaatggtctcttctattcaggcttcaatggatagacat
ttgcgggatcagaatacagagcagtcagcatcagttgatctatctcaaagaaaagtagag
gcagtgagttcaactgctaaaactgggagctttcaggctggcttacccgaatcattttct
gcaccaggtggtactgaacacttgaataccgaatcaactgatggtaacatggtgaattct
gtgggaacaacattccctgcaaggtctaaagcacaaaagggaaattctgttgaggagctt
gaggagatggatagtcaagatgcaggaatcactaatgcaactgagccaatggatcactca
tga
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