Gavia stellata (red-throated loon): 104255823
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Entry
104255823 CDS
T08384
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-23-like
KO
K16507
protocadherin-16/23
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gste04515
]
104255823
Cell adhesion molecules [BR:
gste04515
]
Cadherins
Cadherin related
104255823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_pro
Cadherin_4
RIFIN
Motif
Other DBs
NCBI-GeneID:
104255823
NCBI-ProteinID:
XP_009808345
LinkDB
All DBs
Position
Unknown
AA seq
2722 aa
AA seq
DB search
MAGTGLVCEILPVLTPGLCNNNVSKTPLMSSGIVLAQVKATDADADQFGEIEYFLYDGFH
YYEKSKAFHIDPRTGQICVSQDIDREGDPTTYDLLVKATDGGGLSAQAFVRIEIEDINDN
QPVFEQAVYVTSISSHTQPGTEIINVVATDRDSGIYGVVTYELVPGEFSSFFTVDASTGI
IYLISALGHLARSALFLTVSARDGGGLPSATNAAVTVNILQTTSAPAIFERSRYTFSVPE
DAPEDSLIGTVKAREPPNSLEVVSYRISSGDPHGRLSIDPQFGIIRIKKQLDHETQSVMV
LTVQSQLGNSPVYSSTQVNISVIDINDNPPVFLTKSDKVTISHTQPPGTAVYIAHAEDKD
SGLNGAIKYSIASKQSNAFSIDPSLGVVNLTRTVFADKQXRAEDCGSPPLTSLLMLTVII
EEQKMSRTLVFQNLVYQVEISEATSPGARILQVQAHSLDPHSVTFKLMYSLEPSTDSVAF
GISSDTGWIYLRKHLDYECAQIISFRVLVSTSEDENFRQNASTSVIVNVLDENDNSPIFM
RESYFFEMEENPIPRGVVGTITAVDKDSGRNGQLSYFLLSDGKYFKMNSNTGEIINWVAL
DREKQAHHQLTVLVTDHGSPRLNATTAVYIAVRDLNDNEPLFPQVAPGQELHLKVLEGQP
SGTLITTVFAKDFDSGNNGVVLYSIESEEDIGYFQIDAVSGELRTTRSLSHAERPDYRMM
VTARDQGMPSLQGHAAVYIQVIPLPNRRSVFSQDFKHFVVPENFKPAQVLSSLKWPDNHL
TANRKLHFSIAKDDDDIHFEIDSSTGDLLLSKELDYETASHFLLQVIIKDYNNNPPQNNT
VFLSIDVEDQNDHSPYFQDDFVVIGIEENVPVGTLVYTFNAKDGDGGFQNSKIQYFLEIN
NMDENPFLIHPSHGTLTTAFPLDREITRSVILTVSAADQAINLTDRRLDSLAVKIVILDI
NDNSPSFTSLPLSYVMEDVEVGFLVHRIIAKDPDEGRNGQVTYHILSGNENKAFVLDKIT
GLLTTAQLLDREIQERYSLTVMALDDGSPALSATQVLTIIVLDVNDETPIFLKQLYETAV
YENQNPGEFVIKVEAVDKDAGLNSLLQYEILPGSGYEKFKMNSDSGELVTTASLDRETQE
VFSIKVLVRDSGTPSLSSTVTIICTVLDDNDHSPTFLLPTSEICIPENQQPSVIYITQAV
DMDAGNNGALRYKIIGGNVGEYFTLNNTSGKLLVTRSLDREDVSNFTLVIECRDLGSPSR
SSTAQLYLTVLDENDHNPLFAKTQYQISVREDLEEGSAILDLFASDEDDGLNGEVTYSLV
DDTFGAFAIDSVTGTIVTTKALDRETKSQYTFRAVASDSSTHLPRSTTVSVVVHVDDVND
NDPVFLQNPIRAFVPAETPVNETVATVRVEDVDLGSNGAVVFSLLIAKPVFQIDTKTGDI
ILQEPLASEDFSTQLLVTASDQGLSPRTATAMVIIFTEEQEEEISFSHSLYEASVPENSA
AGTSLLTVEAYERKFTGENIKYSIFSDKESIFSIHPITGTITVKEPKLLDYEVKNKIHLS
VLAENGLNSALCGVTVSIQDVNDNVPKFEQSYYKASVWESQSPKTGIIQVFATDLDSGLN
GETEYSILSGNENATFLIDSAQGILATNTVLDHENTSSYRLVVQAADKGNPRLSATSIVR
IQVLDVNDNAPVVQPLREVEVPENALPGFIVTQVSASDVDSRPALQFGFIYDNSPGMKFT
INQHTGVVTVVEPLDFEETAVYKLRIIVSDSVHQTEAELTILVLDINDNPPVFTQDSYQV
SLPELISMDATVLTVSAVDRDSEHNGMISYRILSSAEGFAIDHKNGSVFATGPVTQLEKI
PTIQLVIEATDSGSPALSAVTSVEVHIEDVNNYAPQFTRALYNLSVSEGASVGESVLTFS
AIDYDWTHENTYVEYSIIDGNSDNLFSVETSVVESETSYKLVGNLVLSNILDRERASSHC
LVLLASDRGTPSLNSTATVLITVLDVNDNPPVFSSPEYHIHVKESIPLGSHVTEVSANDC
DAGTNAEITYAMISGNDRGHFRLDGKTGSVDLMKTLDYEDTMKFTLIIQATDGGADVKNV
AFSVVLVNVLDDNDYSPLFLFPSLSCIVSENLPTFSFVCTVNALDFDKGSYGHLTYSIQS
SCLAHREAPRDHDMFFIDPLTGDIHTKQMFDYESQNRYCLIIQAKDKGDSLATVTVQVDI
EGRDEFDPVFTQDQYFFNLPEKNEAGQLLGRVTASDSDGGLDGVVHYSLLKMSPFFSVNQ
TSGSIYLTQTVHRKKNGSKRNDDTLELLVRAHSPKIESKFTVCTVLVNVSNSAESYPVVS
AYSLTISVSVSLVVLLLLVVSLIALILRHKRKDLMNLCVNKEAVSSSATDVNSASEDKDC
QKIQSTESSMLPMGAIAEWLSLAGIREGKDDDDVPCRHSDSSGHSSAEGETAEDEEIKRI
NEHPCRKSTGSALSKCCSRVSDSGIPRESDQLSCQSGETDVMTTMQSMESVQGIKGEGRE
EACDTAYAHNKMLSQTLKKIGIKEKDIMTDLTREYVLMSDRQDAGYDSLATLGTSDEDLG
GGYNWDYVLSWEPRFQPLASVFIDIAKLKDENIHIHSFPKEKKSLVFPPPLITSVAQPGI
RTVPPRMPNIISGQAFQKYPRSPIIHNLGYPPPTMTPSFSPSLSLLTMQTPTASPVMSDG
RMIGTCLIDPSHELATEEEIQV
NT seq
8169 nt
NT seq
+upstream
nt +downstream
nt
atggctggcacaggtcttgtctgtgaaatcctgccagttttaactcccgggctttgcaat
aataacgtttccaaaactccgttaatgtcttcaggcattgtacttgcacaggtcaaggca
acggatgcagatgccgaccagtttggtgaaattgagtattttctttacgatggatttcat
tattatgaaaaatccaaagccttccacattgacccacgtactggtcagatctgtgtgtct
caagacattgacagagaaggagatccaaccacttacgatctcttagtaaaagctacagat
gggggtgggctgagtgcccaagcttttgttcgcattgaaatagaagatattaatgataat
caacctgtttttgaacaagctgtctatgtgacgagcatcagcagtcacacacagccagga
acagagatcatcaatgttgttgccacagacagagattcgggaatatatggcgttgtcaca
tatgaactggtcccgggagaattttcttcttttttcacagtggatgcatccacaggaatt
atttacctgatctcagctcttggccacctggcgcgttctgcgctcttcctgactgtttct
gcgcgggatgggggtggcctgccttctgccaccaatgcagccgtcacggtaaacatcctt
cagaccacttcagcccctgccatatttgagagatcccggtatactttttctgttcctgaa
gatgcacctgaagacagcctgattggcaccgtaaaggccagagagcctccaaattcttta
gaagtggtttcttacagaatttcctctggtgatccgcatggaagattgtctattgacccc
cagtttggtatcatccgcatcaaaaaacagcttgaccatgaaactcagtctgttatggtg
ctcaccgttcagtcgcagttgggtaactcccctgtctacagtagcacccaggtcaacata
tctgtgatagatattaatgacaatcctccagtatttcttaccaaatctgataaggtaact
atttcacatacccagcctcctggcactgctgtctacattgctcatgcagaagacaaagat
agtggcctaaatggggcaatcaaatacagtattgcaagcaagcagtcaaatgcatttagc
attgacccaagccttggagtagtaaacctcaccagaacagtgtttgcggataagcagnnc
agagctgaagactgtggaagtcctcctctgacttctttgctgatgctgacggtgattatt
gaagagcagaagatgagccgtactttggtttttcaaaacttggtgtatcaagtagaaatc
agtgaagctacctctccaggtgcccgaatacttcaagttcaagcccactcacttgatcca
cacagcgttaccttcaagctgatgtattccttagagcctagcacagattctgttgcattt
ggaatcagctctgatactggctggatttatcttcggaaacatttggactatgaatgtgca
cagataataagttttagagtcctggtcagcacctccgaggacgaaaacttcaggcaaaat
gcaagtacatcggtaatagttaatgtcctggatgaaaatgataattctcccatatttatg
cgtgagagctacttctttgaaatggaggaaaatccaattcccaggggtgtggtcggcacc
atcacagctgttgacaaagactcgggaagaaatgggcaactttcctatttcctcttgtct
gacggaaagtatttcaagatgaattccaacacaggtgaaatcatcaactgggttgcacta
gaccgggaaaaacaagctcaccaccagctgacggtgctagtgaccgatcacgggtcaccg
cggctgaacgccaccacagccgtgtacatcgcggtgagggacctcaacgacaacgagccc
ctcttccctcaggtggcacccgggcaggagctgcacctcaaggttttggaagggcagccg
tcagggacacttattaccactgtctttgcaaaagactttgattctggaaacaacggtgtt
gtattatattcgatagaatcagaagaggatataggatacttccagattgatgctgtcagt
ggggagttaagaacaacccggtctctgtcacatgctgagagaccagactacagaatgatg
gtcacagccagggaccaggggatgccttcgcttcaaggacatgctgctgtttacatccag
gtaatcccacttcccaacaggagatctgtcttctctcaagatttcaagcactttgtcgta
cctgaaaattttaaacctgcacaggtgttgagttctctgaagtggcccgataatcatcta
acagctaacaggaaactgcatttcagtatcgctaaagatgatgatgatattcattttgaa
atagatagctcgacaggagaccttttactttccaaggaacttgactatgaaacagcttcg
cacttccttttgcaagttattataaaggattataacaataatcctccacagaataacact
gtcttcctaagtatcgatgtagaagatcagaatgatcattctccgtattttcaagatgac
tttgtagtgattggcatagaggaaaatgtacctgttggcactctggtttacacattcaat
gcaaaagatggagatggtggttttcagaacagcaaaatacagtatttcctagaaattaat
aacatggatgaaaatccatttcttattcacccttcgcatggcaccttgaccacagctttt
ccactagacagggagattactcgctctgtgatccttacagtgtctgcagcagaccaggca
ataaatctgactgatcgcaggcttgattccctggctgtgaaaattgttattttagatatc
aatgacaacagtcccagttttacatctttgcctctttcctatgtcatggaggatgtggag
gtgggcttccttgtgcaccgcataattgcaaaggatcctgatgagggaagaaatggacaa
gttacatatcacattctttcaggcaatgaaaacaaagcatttgtattggataaaatcaca
ggactcttaactacagcccagcttctggaccgtgagattcaggagcgctacagtttgaca
gtcatggctcttgatgatggcagcccagctctttccgccacgcaggttctaaccatcatt
gttctcgatgtgaatgatgagactccgatatttctgaagcaactttatgagactgcagtt
tatgaaaaccaaaatccaggggagtttgtcataaaggtggaagctgtggacaaagatgca
ggactgaattcgttgcttcagtacgaaatcttaccaggatctggttatgagaaattcaag
atgaactcggacagtggagaactcgtaacaactgcatcactggacagggaaacccaggag
gttttcagtattaaagttttggttcgagatagtggcaccccatcgctgtcaagcacagtg
acaattatctgcacggtgctggacgacaacgatcactctcccacgtttcttcttcccacc
tctgagatctgtattccagagaaccaacagccttctgtcatttacattacccaggctgta
gatatggacgctggcaataacggagctctaagatacaaaataattggtggaaatgttgga
gaatacttcacactaaataacacttcaggaaaactgctggtcactcgtagcttagacaga
gaagacgtcagcaatttcactcttgtaattgagtgccgtgacctaggcagtccctcgaga
agctccactgcacagctctatctgacagtcttagatgaaaatgaccacaacccattgttt
gcaaagacccagtatcaaatctccgtgagagaagacctagaggaaggctcagccatcctg
gacctctttgcttctgatgaagatgatggcctgaatggcgaagttacgtactccctcgtt
gatgacaccttcggagcgtttgctatcgacagtgtaacggggactatagttacaacaaag
gcactggaccgggagaccaaatcccagtacacatttagggctgtggcaagtgacagtagc
acccatttgccaagaagcaccactgtcagtgttgtggtgcacgttgatgatgtcaatgac
aatgatcctgtttttttgcagaatcctatcagggcctttgtgcctgctgaaactcctgtg
aatgagacagtagccactgtgagagtggaggatgtggatctgggatcaaatggagccgtt
gtttttagtttgctgatagccaaacctgtatttcagatcgacacaaagacaggtgacatc
attcttcaggagcccttggcttctgaggacttcagtacccagctgctagtgacggcttca
gatcaaggtctctcacctcgaacagccacagctatggtcattatctttacagaagaacaa
gaggaggagatttcattcagccatagcctatatgaagcaagcgtgcctgagaacagtgca
gcaggtacatcacttctaactgtagaagcttatgaacgaaaatttacaggagaaaacata
aaatacagcatcttcagtgacaaggaaagcatattctccatacaccccattacaggtaca
attacagtaaaagagccaaagcttcttgattatgaagttaagaataaaatacatctttca
gtgctggctgaaaatggcttgaactcagctctctgtggagttacagtttcgatacaagat
gtgaatgacaatgtacctaaatttgagcaaagctattacaaagcatcagtatgggaaagc
caaagtcctaaaacgggcatcatacaggtatttgcaactgaccttgacagtgggctgaat
ggagaaactgaatactccattttatctggtaatgaaaatgcaacatttctaattgattca
gcacaagggattttagcaactaatacagtcctagatcatgaaaacacttcatcttacagg
ttggttgtacaagctgctgataaaggaaaccccagactttctgctacaagtattgtgagg
atacaagtgttagatgttaatgacaatgctccagttgtccaaccactacgtgaagtggag
gtcccagaaaatgccctgcctggttttatagtgactcaggtgtcagcaagtgatgtggac
tccaggccagcacttcagtttggttttatttatgataatagtcctggaatgaaattcacc
atcaatcaacacactggtgtagtcacagtggtggaaccattagattttgaagaaactgct
gtgtacaagctgagaatcatagtttcagattctgtacatcaaacagaagcagaactcacc
atccttgttttggacatcaatgataacccacctgtgtttactcaggattcgtatcaggtg
agcttgccagagctcatttctatggatgccactgttctgacagtctctgctgtggatagg
gattcggagcataatggaatgatttcctacagaatcctctcttccgctgagggatttgcc
attgatcataagaatggttcagtgtttgctacaggaccagtgacacagctggaaaagatt
cccactatccagctcgtgatagaagccacagacagtggcagtcccgctctgagtgcggtt
acctccgtagaggtgcacatagaagatgtaaataactacgcccctcagttcacaagggcg
ctatacaatctcagtgtgagtgagggtgcctcagttggagaaagtgtcctcacgttttca
gccatcgactatgattggacacatgaaaacacatatgttgaatactctattattgatggg
aattctgacaatttattctccgtagaaacaagtgttgtggagtcagaaacatcctacaag
cttgttggcaatcttgttttgagcaatattctcgacagggaaagggcttcttctcactgt
ttggtcctccttgcctctgatcgtggaacaccctccttgaattcaactgctactgtgcta
ataactgtactggatgttaatgataatcctccagtatttagcagcccggagtaccatatt
catgtcaaagaaagcatccctctaggtagtcatgtcactgaagtttcagcaaacgactgt
gatgcaggcactaacgcagagatcacttacgctatgatctctggaaatgacaggggacat
tttcgcttggatgggaaaacgggatcagtggatttgatgaaaacactggattatgaggat
accatgaaattcactttgatcatccaagccacagatggaggagctgatgtaaaaaatgtg
gctttttctgttgttcttgttaatgtcctagatgacaacgattattccccactgtttttg
tttcccagcctgagctgcattgtcagtgaaaatctgcctaccttttcttttgtgtgcact
gttaatgcactggattttgataaaggctcctatggccaccttacctactccatccagtct
tcatgtctggctcatcgtgaagctcctagagaccatgacatgttcttcattgatcctttg
acaggagatattcatacaaagcaaatgtttgactacgaaagtcagaataggtactgtctc
ataatccaagcaaaagacaaaggtgactcactggccaccgttacagttcaggtagatatt
gaggggagagatgaatttgacccagtgtttacacaagatcagtatttctttaatctccct
gagaagaacgaagcaggccagttgcttggcagagtgacagcatcagacagcgatggtgga
ctggacggagttgttcattactccctgctaaaaatgtctccattcttttctgtgaaccaa
accagtggtagtatttatttgactcagactgttcacagaaagaaaaacggcagcaaaagg
aatgatgacaccctggaattgttggtaagagctcatagccccaaaattgagtcaaagttt
acagtatgcactgttttggtaaatgtttccaattctgctgagagttatcccgtagtgtca
gcatatagcctgaccattagcgtttcggtctccttggtagtgttgctactgcttgtggtc
agtcttattgcacttattctgagacataagcggaaagatctgatgaacctctgtgtgaac
aaagaagcagtatcctcctcagctactgatgtgaattcagccagcgaagataaggactgc
cagaaaatccaaagtactgagagcagtatgcttcccatgggtgccatagcagaatggctg
agcttagcaggaatcagagaggggaaggatgatgatgatgtcccctgcaggcattcagac
tccagtggccacagttctgctgaaggagaaactgcagaggatgaggaaatcaaaaggatc
aatgagcatccttgcagaaaaagcaccggctcagcgctgagcaagtgctgctcacgggtg
tcagattcagggatcccaagagagtctgatcagctctcctgtcagtctggagaaacagac
gtcatgactaccatgcaaagcatggaaagcgtgcagggcattaaaggagaaggtagagaa
gaagcctgtgacacagcctatgcacataacaaaatgttgtctcaaacacttaagaaaatt
ggaataaaagagaaagacataatgacagacctcacaagagaatatgtcttgatgtcagat
aggcaggatgctgggtatgattcgcttgcaactcttggcacctctgatgaggatctcgga
ggtggttataactgggattatgtgctcagctgggaacccagatttcaacctcttgcctca
gtgtttattgatattgctaaactgaaagatgaaaacatacacattcatagcttccctaag
gagaagaaatctcttgttttccctcctcccttgataacatcagtagctcagcctggcata
aggacagtgccaccacgaatgccaaatataatatcagggcaagcatttcaaaaataccct
cgttctcccattatccataatcttggataccctccaccaaccatgacccccagtttttct
ccttctctctctttacttaccatgcagacgcctactgcttctccagtaatgtctgatggg
agaatgataggaacatgtcttattgatccaagccatgaacttgcaacagaggaagaaatt
caggtatag
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integrated database retrieval system
