Gavia stellata (red-throated loon): 104256163
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Entry
104256163 CDS
T08384
Symbol
CAPN1
Name
(RefSeq) LOW QUALITY PROTEIN: calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04141
Protein processing in endoplasmic reticulum
gste04210
Apoptosis
gste04217
Necroptosis
gste04218
Cellular senescence
gste04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104256163 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104256163 (CAPN1)
04217 Necroptosis
104256163 (CAPN1)
04218 Cellular senescence
104256163 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104256163 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gste01002
]
104256163 (CAPN1)
Enzymes [BR:
gste01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
104256163 (CAPN1)
Peptidases and inhibitors [BR:
gste01002
]
Cysteine peptidases
Family C2: calpain family
104256163 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
104256163
NCBI-ProteinID:
XP_009808791
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MMPFGGMAARLQRDRLRAEGVGQHNNAIKYLNQDYEALKQECIESGTLFRDPQFPAGPSA
LGFKELGPHSSKTRGVEWKRPSELVEDPQFIVGGATRTDICQGALGDCWLLAAIGSLTLN
EELLHRVVPHGQSFQEDYAGIFHFQIWQFGEWVDVVVDDQLPTKDGGFEDFTGGVAEMYD
LKRPPRNMGHIIRKALERGSLLGCSIDITSAFDMEAVTFKKLVKGHAYSVTAFRDVNYRG
QQXQLIRIRNPWGQVEWTGAWSDGSSEWDNIDPGDREELQLKMEDGEFWMSFRDFMREFS
RLEICNLTPDALTKDELSRWHTQVFEGTWRRGSTAGGCRNHPATFWINPQFKIKLLEEDD
DPGDDEVACSFLVALMQKHRRRERRVGGDMHTIGFAVYEVPEEAQGSQNVHLKKDFFLRN
QSRARSETFINLREVSNQIRLPPGEYIVVPSTFEPHKEADFVLRVFTEKQSDTAELDEEI
SADLADEEEITEDDIEDGFKNMFQQLAGEDMEISVFELRTILNRVIARHKDLKTDGFSLD
SCRNMVNLMDKDGSARLGLVEFQILWNKIRSWLTIFRQHDLDKSGTMSSYEMRMALESAG
FKLNNKLHQVVVARYADADMGVDFDNFVCCLVKLEAMFRFFHSMDPEGTGTAVMNLSE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgatgccctttggtgggatggctgcccgtctgcagagggaccgcctgagagccgagggg
gttggccaacacaacaacgccatcaagtacctcaaccaggactatgaggccctcaaacag
gagtgcattgagagcggcaccctctttagggacccccagtttccagccggcccctctgct
ctcggattcaaggagctgggcccacactccagcaagacgcggggagtggagtggaagcgt
ccgtcggaattagtggaggaccctcagttcatcgttggtggtgcaacccggacggacatc
tgccagggggctctgggtgactgctggctgctggctgccatcggctccctcacactcaat
gaggagctcctgcaccgcgtggtgccccatgggcagagcttccaggaggactatgctggc
atcttccacttccagatctggcagttcggtgagtgggtggacgtggtggtggacgaccag
ctgcccaccaaggatgggggcttcgaggacttcaccggcggcgtggcagagatgtacgac
ctcaagcggccgccacgcaacatgggccacatcatccgcaaggcgctggagagggggtcc
ctgctgggctgctccatcgatatcacaagtgcctttgatatggaagcggtgaccttcaag
aagctggtgaagggccacgcctattctgtcacagctttcagagacgtgaactaccggggt
cagcagtaacagcttatccgcatcagaaacccctggggtcaggtggagtggactggagcc
tggagcgatggctcctccgagtgggacaacattgaccctggtgacagggaagagctgcag
ctgaagatggaagatggagagttctggatgtctttccgggacttcatgagggagttctcc
aggctggagatctgcaacctgacccctgatgccctcaccaaggatgagctcagcaggtgg
catacgcaggtgttcgagggcacatggcgccgggggagcactgccgggggctgcagaaat
cacccagccacattctggatcaatccacagtttaagatcaagctgctggaagaggacgat
gaccccggggacgatgaggtggcctgcagcttcctggtggctctgatgcagaagcatcgg
cggcgggagcggcgggtggggggcgacatgcacaccatcggcttcgctgtctacgaggtt
cctgaggaggcccagggcagccagaacgtgcacttgaagaaggacttcttcctgcgaaac
cagtcccgggcacggtccgagaccttcatcaacctgcgggaggtgagcaaccagatccgg
ctgccccccggtgagtacatcgttgtgccctccaccttcgagccgcacaaggaggccgac
ttcgtcctgcgggtcttcaccgagaagcagtcggacacagcagagctggacgaggagatc
tcagcagatctggcagatgaggaggaaataactgaggatgacatagaggacggcttcaag
aacatgttccagcagctggcaggggaggacatggaaatcagcgtcttcgagctccggact
attctgaacagagtcatcgctaggcacaaagatctgaagacagatgggttcagcctggac
tcctgccgcaacatggtcaacctgatggataaagatggcagtgcccgccttgggctggtg
gagttccagatcctgtggaacaagatccggagctggctgacgatcttccgccagcatgac
ctggataagtcgggcaccatgagctcctatgagatgcgcatggctttagagtcagccggt
ttcaagctgaacaacaagctgcatcaggtggtggtggcccgctatgcagatgctgacatg
ggtgtggactttgacaactttgtctgctgccttgtaaagctggaggccatgttcaggttc
ttccacagcatggaccccgaaggcactggcaccgccgtcatgaacctctctgag
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