Gavia stellata (red-throated loon): 104256557
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Entry
104256557 CDS
T08384
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gste03036
]
104256557
Enzymes [BR:
gste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
104256557
Chromosome and associated proteins [BR:
gste03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104256557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
CS
DEAD
Helicase_C
Helicase_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
104256557
NCBI-ProteinID:
XP_009809338
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MEVLLLEIEDPGCFWVTMKGCGPYIVDEIEYKNLNAEMNRFYDKSYEDVAEVKPLTVEEG
QTCVVFSEELKCWCRAIIKSIMYCTDHYQTECFLVDYAKYIFVKSKDIRVALEAFMQIPY
RAKKCRLYRTKPVTLRIDFCEDTAKIVPAKRWDSAATRYFQNLLKATTQMKAKLCAVEDN
TFDVFLYVTIKDEKVCVNDDLVSKNFARFEEAKENTGSSADYQEDQTSLRVESLPVKIVN
PALDFRPVLCQKKVSTNLETGLAVSTSFLEETYQRSSTDLNENTVPSFQNLSEETNCVFL
SNKIEPSSILETAPLFDDLKKELTRKKFLGPNFTESYCWPPVARGCDVVAISYQGNDPFL
YIPPVLTFLQSGSCYKALPNRNGPLALILCPGWKKAQLVFELLKTYKRCSRQLHPMLIIL
GQNKEEARSVKIQGCEVIVTTPYSLLRLLEHHSLLFCRLCHLVLDEIEVLFSDATEQVFT
VLDYYKKAIITEEREYIPHQIIAVGTRWNKHIALLIKEFMNDPYIVITAMEEASIYGNVQ
QVVQPCTNHERTAVLLKILDFTHNNLQKVLVFTNSVNEAEMVHEALKNNSIFSLKIHKES
EFNFKYILEEWTKKYSSGSHVVLVLTDDCMQSLGITDATCVIHFSFPSPRIFGQRLYSMS
DNFHNVIKDSSVDQEYTQARSVILLTENSTCHALGILRYLQHAEAEIPPQLHDITAKTLE
AEEDKKFSRPLCAYLKTLGICKTRTVCPDRHQINLQIDVPQNIPDKITLMPGCVTILPLH
IVSATNYFGRIVDKQKDQYTILAEEINEYFKKPSNKVSVKNVEKLAFYGLCEKTLFHRVQ
VVEISPREEENLFFNVKIKYIDEGRTSRVQSYQLLHLPARFQCLPPQAVEFVVCRVKPID
NEMEWNPKVTHYIHHKIKGKLHEAKIVHTLGNTAWVDPMVRVTRLSDLKMSVNEYNVRSE
ILSTGLGTDNPEHITQLQKLCGRMKALDLAKNLEPLSIKEDTAGPENVSNPQNMSIQENS
TENCNSPKITFGYHPYDGVAQTKEAEDSILRQHKCFYPEIKWFQNEETVTVKVKIASVAD
CKCEFSKEKVVFSACSGDKLYLADMELHQYILAEKSTCVIKDKEAVIVLVKEKKGAWCKL
VKNKNPHVSFDFEHWEDLEDKNPFPVGTKKLYCTAAVTEELVDSSEDSGTESDE
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcttgctattagagattgaagatccaggttgcttttgggttactatgaaagga
tgtgggccttacatagtcgatgagatagaatataaaaacctgaatgctgaaatgaatcga
ttctatgacaaatcttatgaagatgtggctgaagtaaaaccactaacggtagaagaaggc
cagacttgtgtggttttcagtgaggagctcaaatgctggtgtagagcgattattaagtca
atcatgtactgtacagatcactatcaaacagaatgttttcttgtggattatgccaaatac
atttttgttaaatcaaaggacattcgagttgcactggaagcatttatgcagatcccatat
agagcaaaaaagtgtagactgtatcgcacaaagccagtgacgttgcggatcgacttttgt
gaagatactgcaaaaatagtaccagccaaaagatgggatagtgctgctactcggtatttt
cagaaccttctcaaagcaactacccaaatgaaagccaagttatgtgctgtagaagataac
acatttgatgtttttctttatgtgacaataaaagatgaaaaggtgtgcgttaatgatgat
cttgtctcaaagaactttgctcgttttgaggaagctaaagagaatacagggagttctgca
gattatcaggaggaccaaacatcattacgtgttgagtctcttccagtgaaaattgttaat
cctgcgcttgatttcaggccagtgctgtgtcagaagaaggtatcaacaaatcttgaaaca
ggtcttgctgtttccacttcatttcttgaagagacataccaaaggtcaagcacagatcta
aatgaaaatactgtgcctagttttcaaaatcttagtgaagaaacaaactgtgtctttcta
agcaacaaaattgagccatcgtcaattctggaaacagcaccgctttttgatgatctgaaa
aaggaacttactcggaaaaaatttttaggccctaacttcacagaatcttactgttggccg
ccagtagctcgaggatgtgatgtagttgccatctcatatcagggaaatgatcctttttta
tatattccaccagttcttacatttttgcagtcgggaagttgctacaaagccttgccaaac
aggaatggaccactagcacttattttatgtcctgggtggaagaaggcacaacttgttttt
gagctactgaaaacatacaagagatgctccagacagcttcatccaatgttgataatactt
gggcagaacaaagaagaagctagaagtgtgaaaatccaaggatgtgaagtaatcgtgact
acaccatatagcctcctgagactgttggaacatcacagtttattattttgtagactttgc
catcttgttcttgatgagattgaggtactgttctctgacgctactgaacaggtttttact
gtattagattattacaagaaagccattattactgaagagcgggagtatataccacatcag
attattgctgttggaactcgttggaataaacatatagcactcttgataaaggagttcatg
aacgatccttacattgtgataacagctatggaagaagcttccatctatggaaatgtgcaa
caggtcgtgcaaccttgcacaaaccatgagagaactgctgtgttactcaaaatactggat
tttacccacaataatcttcagaaggtgctggtattcacgaattcagtaaatgaagcagaa
atggttcatgaggcactgaagaacaattcaatattttccttgaaaatacataaagagagt
gagtttaatttcaagtatatcttagaggagtggacaaaaaagtatagttctggcagtcat
gttgtgttagttttaacagatgactgcatgcagtctttgggaattacagatgcaacttgc
gtgatacatttcagttttccttctccaagaatctttggtcagcgtctatacagcatgtct
gacaacttccataatgtgataaaggattcttctgtagatcaggaatatacacaggcaagg
tcagtcattctgctaacagaaaacagcacatgtcatgcacttgggatcctgcgctatttg
cagcacgcagaagctgaaattccaccacaactgcatgatattactgccaagacactagaa
gctgaagaagataagaaattctcaaggccactttgtgcctatcttaaaacattggggatt
tgcaagactagaacagtgtgtccagaccgtcatcagattaatttacaaatagatgtgccc
cagaatataccagataaaattacactaatgcctggatgtgtgacaatactgcctctccat
attgtaagtgcaacaaactacttcggtcgaatcgtagataaacaaaaggaccaatataca
attcttgctgaagaaattaatgagtattttaagaaacccagtaataaagtttctgttaaa
aacgtggagaagctagcattttatggattatgtgagaaaacactttttcacagggttcag
gtggtagagatttccccaagagaggaggaaaatttgttctttaacgtcaaaattaaatat
atagacgaaggcagaacaagtcgagttcagagctatcagctgcttcacttacctgcaagg
tttcagtgtctgccacctcaggctgtggaatttgtagtttgtagagtgaaacccattgat
aatgaaatggagtggaacccaaaggtaactcattatattcatcacaaaattaaaggaaaa
ctacatgaagcaaaaatagttcataccttgggaaatacagcttgggttgacccaatggtc
cgggttaccaggctttcagatttgaagatgtctgtcaatgaatacaacgttcgatctgag
attttgtctacgggtctgggaactgacaatccagaacatataacacaacttcagaagttg
tgtggacgcatgaaggcattagatcttgcaaagaacttggaacctttaagcataaaggaa
gatacagctggtccagagaatgtgtccaatccacagaatatgtcaatacaagaaaattct
actgaaaactgtaattctcctaaaattacttttgggtatcatccatatgatggtgtagct
caaactaaggaagcagaagactctatcctgcgtcagcataaatgcttctatccagaaata
aaatggtttcaaaatgaagagaccgttacagtgaaggtaaaaatagcaagtgtagctgac
tgtaagtgtgagttctctaaagagaaggtggttttcagtgcttgttcaggagacaaactt
tatttggctgatatggagctgcatcaatatatacttgcagaaaagtctacgtgtgtgatt
aaggataaagaggctgttattgttctcgtgaaagagaaaaaaggagcgtggtgcaaatta
gtgaagaacaagaatcctcatgtgtcttttgattttgaacactgggaagatttagaagat
aaaaacccttttccagttggtactaaaaaattgtattgcactgctgcagtaacagaagaa
ttggttgactcctcagaagacagtggaacagaaagtgatgagtaa
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