Gavia stellata (red-throated loon): 104257150
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Entry
104257150 CDS
T08384
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste02010
ABC transporters
gste04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104257150 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104257150 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gste02000
]
104257150 (ABCA1)
Transporters [BR:
gste02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104257150 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
104257150
NCBI-ProteinID:
XP_009810137
LinkDB
All DBs
Position
Unknown
AA seq
2263 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGXXXXXXXXXXICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDAKRLLLYSQQ
DTSIKDVQKVLGKLRKLGNFSGSELKLRDFLVDNETFSDFLHHNVSMPSSAVEELLDAEV
NLQQVIVSGYRMRLRDLCNSSALSEFLTIQNQTVAMDSEAFICTLPKEKLHAAEQAFRAN
VNPLKPLQRRLSFNSSLRDLSETVEALRESLGKLVKELLSMKSWSDMRQEVMFLTNVNAS
NSSTQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVTNFYDNSTTPY
CNELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAIRKVMTEVNRTFQELGVFRDLGG
MWEEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPASSWTVEDVARFLSNHPEDFETA
NGSVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVATEVRLINKSLELLDERRFWAGIV
FTEIAPNSIELPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQ
DVVEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIK
GIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSV
VFVFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDYVSFSLKI
FASLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGV
MTWYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQHPHPDQKGPSEVCKEEEPMHLSL
GVSIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTA
FILGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMAM
DVGLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKY
RQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSS
LSSCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVE
DIGHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVD
AETSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPESRETDLLSGMDGKGSYQ
MKGWKLTQQQFMALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLE
LQPWMYDEQYTFISNDAPEDAGTQRLLDALLNKPGFGTRCMQGHSIPDTPCTMGQREWTT
ASVPDSVLDIFLKGNWSMENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQ
NLTGRNISDYLVKTYVQIIGKSLKNKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIKQV
KKILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANL
QQGKNASAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQ
ERVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVL
ALLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNN
INDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAV
EGVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELT
KIYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSIL
SNIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYG
EKYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVV
LTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEF
FGHAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFV
NFAKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggactcagctgggattgctgctatggaagaacttcacctacagaagacga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tccgtaagactttcatatccgccctatgagcagcatgaatgtcacttcccaaacaaagct
atgccttcagcaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatctgcaatgctaac
aacccttgtttccgctacccaactcctggggaatcccctggtattgttggaaacttcaat
gcctccattgtttcccgcctgttctcagatgccaagaggttactcttgtacagccaacag
gacacgagcataaaggatgtccagaaggtcctgggaaaactgcgcaagctgggaaacttc
tctggctcagaattgaaacttcgggatttcctggttgacaacgagacgttctcagacttc
ctccatcataatgtgtccatgccatcatctgcagtagaggagctactggatgcagaggtc
aacctccagcaggtcattgtgtctggttaccgaatgcgactgcgagatctctgcaatagc
tcagcactgtctgaatttcttacaatccaaaatcagacagtggccatggactctgaagcc
ttcatttgcaccttgccaaaggaaaaactgcatgcagctgaacaagccttccgtgctaat
gtgaatcctttgaagccccttcagagacgactttctttcaattcctccttgcgtgatctg
tcagaaactgtggaagctttgagagagagccttgggaagcttgttaaagagttgctgagc
atgaagagctggagtgacatgagacaagaggtgatgttcctgaccaatgtgaatgcttca
aactcctctacacagatttaccaggctgtgtctcgcattgtgtgtggccatcccgagggt
ggagggctcaaaattaaatccctcaactggtatgaggataacaattacaaagcactgttt
ggaggcaacagcactgaagacgatgtaactaacttctatgataactccacaacgccctac
tgcaatgagctgatgaagaacctggaatccagcccgctttccaggattatctggagggct
ttgaaacccttgctgattgggaagatcttgtatactccagacacaccagccataaggaag
gtcatgactgaggtgaacaggacgttccaggagctgggtgtgtttcgtgaccttggaggg
atgtgggaggagataagcccgaagatttggacgtttatggaaagtagtcaggaaatggat
ctcattcggactctgctgaaaggcaaagctctctgggacctgcacttgccagcttccagc
tggacagtggaggacgttgcccgttttctgtcaaaccatccggaggactttgagacagca
aatggctcggtatatacctgggtggacgccttcaatgagacagaccgggctatccagacc
atctcccgcttcatggagtgtgtcaacttggacaaactggagcccgtggccacagaagtc
cggcttataaacaagtcgttggagcttctggatgaaaggaggttctgggctggcatagtc
ttcactgaaatagctccgaacagcatagagctccctcaacatgtgaaatacaagatacgc
atggacattgataatgtggaaaggaccaacaagatcaaggacgggtactgggatcctggc
ccccgtgctgatccctttgaagacatgcgctatgtttggggaggctttgcctacctgcag
gatgtggtggaacaggccatcattcgggtgcagacaggcacggagaagaagacaggagtt
tatgtgcagcagatgccctatccatgttacgtggatgacatatttctgcgtgtcatgagc
cgctccatgcctctcttcatgactctagcctggatctactcagtggctgtcataattaag
ggcattgtgtatgagaaggaagcccggctgaaggagacgatgaggattatgggacttgac
aatggcatcctttggctaagctggttcattagcagcctcatccctctcctgatgagtgca
ggcctgctggtgctgatacttaagatggggaatctgctgccttacagtgaccctagtgtg
gtgtttgttttcctctcgatcttcggtgttgtgaccatccttcagtgcttccttatcagc
accgtgttctccagggccaacctggcagctgcctgtgggggcattgtctatttcacgctg
tacctgccttatgtgctgtgtgttgcctggcaggactatgtcagcttctcactcaagatc
tttgcgagcctgctgtctccagtagcctttggctttggttgtgagtactttgcactgttt
gaggagcagggagttggtgttcagtgggacaacttctttgagagcccattggaagaagat
ggctttagcatcaccacatctgctgtcatgatgttgttcgacaccttcctatatggggtc
atgacctggtacattgagtccgtcttcccaggccagtacgggattcccaggccctggtac
ttccctttcacaaagtcctattggtttggtgaggaaccacaggacaggcagcaccctcat
cctgaccagaagggaccttcagaagtctgcaaggaggaagaacctatgcatctgagcctt
ggtgtttccatccagaacctggtcaaggtttatcgtgatggcaagaaagttgctgtagat
ggtctcacactgaacttctatgaaggacagatcacttcctttctgggacataatggagca
gggaaaaccactaccatgtccatcttgactggcttgttccccccaacctctggtacagcc
ttcatcctgggcaaagatatccgctctgagctcagcaccatcaggcagaacctgggtgtc
tgtccgcaacacaatgtgctctttgacttgctgactgtggaggagcacatctggttctac
gctcggctcaaagggctgccggaaaagaaggtgaaagaggagatggagcagatggcaatg
gatgtcggtttgcctcacaaacttaaagctaggacaagcaaactttctggtggcatgcag
aggaagctctcagttgccttagcctttgttggtggctccaaggttgtcattctggatgag
cctacagctggggtggatccttattctcgcagagggatatgggaattgctcctgaagtat
cggcaaggccgcactatcattctctccacacaccacatggatgaggcagacattctgggg
gaccggattgccatcatttctcatggcaagctctgctgtgttggctcttctctcttcctg
aagaaccagctgggaacaggctattatttgaccctggtcaagaaggatgtggattcctct
ctgagctcctgccgaaacagcagcagcacagtgtcctatctgaaaaaggatgacagtgtc
tcccagagcagctctgacgctggccttggcagtgaccatgaaagtgacacactgacaata
gatgtctctgcaatttcaaatctcattacgaaacatgttcctgaggccaggctggtggag
gacatcggccatgaattaacctatgtcttgccatacaaggctgctaaagagggagctttt
gtggagctgttccatgaaattgatgaccgtctctctgatcttggcatttccagctacggg
atctctgaaaccaccctggaggagatcttcctgaaagtggctgatgatagcggtgtggat
gcagaaacctcagacgggacattgccagccagaaggaacaggcgtgtgtttggagacaga
cagagctgccttcgtccatttacagaagatgatgcatttgaccctaatgattcagacata
gatccagaatccagagagacagaccttctcagtggcatggatgggaaaggatcctaccag
atgaagggctggaagctcacccagcagcagtttatggctctgttgtggaagaggctgctt
attgccaagagaagtcgtaagggcttctttgctcagattgtgctgccagctgtttttgtg
tgtattgctctcatgttcagcctgattgttcctccctttgggaagtatcccagcctggaa
ttacagccctggatgtatgatgagcagtacacttttattagcaatgatgctccagaagat
gcaggcactcagaggcttttggatgcccttctcaacaagcctgggtttgggacacgctgt
atgcagggacactccatcccagacactccttgcaccatggggcagagggaatggaccacc
gcttcagttccagactcagtcctggacatcttcttgaaaggcaactggagcatggagaac
ccttccccatcttgcgagtgcagcaatgagaagatcaagaagatgctgcctgtgtgcccc
cctggtgcaggagggctgccacccccacagcgcgagcaagacactgctgacatcctccag
aatctgacaggccgcaatatatcagactacctagtgaagacctacgtgcagatcattggg
aaaagcttaaagaataagatctgggtgaatgagttcaggtatggtggcttttccttggga
gccagcagttccctcatgcttcctccaagccatgaagtcactgatgccattaaacaggtg
aagaaaatcttggagctagcacaggggagttccggagataggtttctcaacagcttgtca
agtttcatgaaaggcctggatacaaagaacaacgtgaaggtgtggttcaacaacaagggc
tggcatgccattgcctccttcctgaatgtgatcaacaatgccatccttcgggccaacctg
cagcagggcaaaaatgctagtgcttatgggatcactgccttcaatcacccactcaatctc
accaaacaacagctctctgaagtggccctaatgaccacctccgtggatgtcctagtctcc
atctgtgtgatctttgccatgtcctttgttcctgccagctttgtggtcttccttatccag
gaacgtgtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgtgatctac
tggctggccaactttgtctgggatatgtgcaattacattgttccagccactctagtcatc
atcatcttcatctgcttccagcagaagtcctatgtatcctcctccaacttgcctgtgctg
gctctccttctgtttctctatgggtggtccatcacccctctcatgtatccagcctccttc
gtgttcaaaatccctagcaccgcatatgttgtgctgaccagtgtgaacctcttcattggt
atcaatggtagtgtggccacctttgtcctggagctcttcaccaacaacaaactgaacaac
atcaatgacatcctgaagtctgtcttcctcatcttcccccatttctgcttggggcgggga
ctcattgacatggtcaaaaaccaggccatggctgatgctctggagaggtttggagaaaat
cgtttcgtgtcccctctgtcgtgggacctagtgggaaggaacctctttgccatggcagtg
gagggtgttgtcttcttcctcatcacagtgctcatccagtacaggttcttcatcaaaccc
aggcccgtctacgccaaactgcctccggtgaatgatgaagatgaggatgtaaccagagag
agacagaggataattagtggaggaggacagagtgacattttggaaatcaaggagctaacc
aagatttacagaatgaaacgaaagccagcggttgataggatctgtgtcggaatcccccct
ggagagtgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatg
ctaactggtgatacagatgtgacaggaggtgaagctttcctcaaaggaaacagtatcttg
tccaacatccaagaagtccatcagaacatgggctactgcccacaattcgatgctgttaat
gagctgctgactgggcgagagcacttggagttctttgcgctcctgagaggtgttccagag
aaagaagtctgcaaggttggcgagtgggcaattcggaagctgggtcttgtgaaatatgga
gaaaaatatgcagggaattacagtggagggaacaggcgcaagctttccacagccattgcc
ctcattggagggccacctgtggtgttcctggatgagccaacaacagggatggatcctaaa
gcacgtcgtttcttgtggaactgtgctctgagtgtaatcaaagaggggagatcagtggtg
ctcacatctcacagcatggaagaatgtgaagccctgtgcactcgaatggcgataatggtc
aatgggcgattcaggtgtttgggcagcgtccagcatctgaagaacaggtttggagatggt
tacaccatagtggtgagaattgcaggggcaaacccagacctgaagcctgttgaggagttc
tttgggcatgccttccctggaagtgtcctgaaggaaaagcatcggaatatgctgcagtac
cagcttccctcttcaccatcctccctggccagaatattcagtattctctcccagaacaaa
aagagactccacatagaagactactccgtttctcagaccacacttgaccaagtatttgta
aattttgctaaggaccaaagcgacgatgaccacactaaggacctgtcattgcacaaaaac
cagactgtggtagacattgcaatccttaattccttcctgcaagatgagaaggtaaaagaa
agttgtgtgtga
DBGET
integrated database retrieval system
