Gavia stellata (red-throated loon): 104257162
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Entry
104257162 CDS
T08384
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104257162 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104257162 (DDX3X)
03041 Spliceosome [BR:
gste03041
]
104257162 (DDX3X)
03036 Chromosome and associated proteins [BR:
gste03036
]
104257162 (DDX3X)
Enzymes [BR:
gste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104257162 (DDX3X)
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104257162 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
104257162 (DDX3X)
Spliceosome [BR:
gste03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104257162 (DDX3X)
Chromosome and associated proteins [BR:
gste03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104257162 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104257162
NCBI-ProteinID:
XP_009810157
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MAAAPGFVAAPSPRSDFGECCPHGGDSGGPFSGLDLNSSDSQSEGSSSSKGRYIPPHLRN
REASKQGFDSGGWSSSRDKDAYSSFGARSDRGAKSSFFDRGNGSRGGRYEERGRGGDYDR
SGFGRFDRGGGNSRWSDKSDEDDWSKPLPPSERLEQELFSGSNTGINFEKYDDIPVEATG
SNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTA
AFLLPILSQIYADGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYR
SRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRM
LDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTS
ENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIH
GDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRT
GRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEQHHKGGGSRGRSKSR
FSGGFGARDYRTSSGSGSSSFSSSRSTSSRSGGSGSRGFGGGGYGGFYNSDGYGGNYNSQ
GVDWWGN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgccgggcttcgtcgctgcgccatctccgcgatcagattttggcgagtgt
tgcccccacggtggagacagtgggggtccattttctggtctagacttgaattcctcagac
tctcagagtgaaggaagctcttcaagcaaaggccgatacattcctcctcacttgaggaac
agggaagcttcaaaacagggttttgatagtggtggctggagttctagcagagacaaggat
gcatacagcagcttcggtgcgcggtctgaccgcggagcaaaatcaagcttctttgaccgt
gggaatggatcgagaggaggaagatacgaagagcgtggaagaggtggcgactatgacagg
agtggctttggtagatttgaccgtggtggtgggaatagccgctggtctgacaaatcagat
gaagatgactggtcaaagcctcttcccccaagtgaacgcctggaacaagagctcttttca
ggaagcaatactggcattaactttgagaaatacgatgacattcctgttgaagcaacaggc
agcaactgtcctccacatattgaaagtttcagtgatgttgacatgggagaaattattatg
ggaaacattgagctcacacgctacacccgtcctactccagtccagaaacatgcaatacct
attattaaagaaaagagagacttgatggcctgtgctcagacagggtctgggaaaacggct
gcatttcttctaccaatattgagccagatctatgcagatggccctggtgatgccttgaga
gctatgaaggagaatggaaggtatgggcgccgtaagcaatacccaatctcactggtcttg
gctcccactagagaactggctgtgcagatctatgaggaagccagaaagtttgcataccgt
tccagagttcgtccctgtgttgtatacggtggtgcagacatcggtcagcagatacgtgac
ttggaacgtggatgtcacttgcttgtagcaactccaggacgactggttgatatgatggag
aggggaaagattggattggatttttgcaagtacctagtgcttgatgaagctgacagaatg
cttgatatggggtttgaacctcaaattcgtcgaattgttgaacaagatactatgccacca
aagggggttcgtcataccatgatgttcagtgctactttccccaaggaaatccagatgctt
gctcgtgacttccttgatgaatatatctttctggctgttggtagagtaggttctacatct
gagaatatcacacagaaagtagtatgggtggaagagtcagacaaacgatcgtttctgctt
gacctgctaaatgccacaggcaaggattccttgactctggtgttcgtggaaactaaaaag
ggtgcagatgctcttgaggacttcttgtaccatgaaggatatgcctgtacaagtatacat
ggagatcgctctcaaagagacagagaggaagcactgcaccagttccgttcgggcaagagc
ccaattcttgttgccacagcagtagcagcaagaggactggatatctcaaatgtaaagcat
gtcataaactttgacttgccaagtgacattgaagagtatgtacatcgtattggtcgtaca
ggccgagtaggaaaccttggtcttgccacctcattcttcaatgagaggaacataaacatc
accaaggacttgcttgatcttcttgttgaggctaagcaagaagtgccatcttggctggaa
aacatggcttatgaacagcatcacaaaggaggtggcagccgtgggcgatctaagagtaga
ttcagtggaggatttggtgccagggactatcgaacaagcagtggttctggcagcagtagc
tttagtagcagtcgatcaaccagcagccgcagtggaggaagtggcagcagaggatttgga
ggtggtggttatggcggcttctacaacagtgatggatatggaggaaactataactcccag
ggggttgactggtggggcaactga
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