Gavia stellata (red-throated loon): 104257581
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Entry
104257581 CDS
T08384
Symbol
DCHS1
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-16
KO
K16507
protocadherin-16/23
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
104257581 (DCHS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gste04515
]
104257581 (DCHS1)
Cell adhesion molecules [BR:
gste04515
]
Cadherins
Cadherin related
104257581 (DCHS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_Cad99C_N
Cadherin_CELSR2_9th
Ig_CLSTN
Motif
Other DBs
NCBI-GeneID:
104257581
NCBI-ProteinID:
XP_009810693
LinkDB
All DBs
Position
Unknown
AA seq
2220 aa
AA seq
DB search
DPEHYYFMVTTAKATTDYHILMPFLTQVTATDADSGTFGSLSYSIGSGIGSVVPTQFSID
KHTGQLCTVQPLDRDEGMSAYDFTITAVDGGGLNSMVYVKVFLEDINDNRPVFYPLEYAA
SISTQSMPGTAVLRVTAHDKDEGLHGKVTYRIVLGNSPPLFSLNKDTGVISLSWSLSGKA
NTLVQLVISAQDGGGLQAQPNARVNISIVEGTVSPPVFEQAQYFFTVPEDMLQGATVGAV
RAQNPPGHADDIFYSISSGDPHGYFSIDSASGQLHTSLPLDHESQAVLILDVQARSGSPP
AYSNTRVKISVSDVNDNMPLFPAPSDSILLPEATEPGTTVYTLQAEDRDSGANGQVNFEL
VSGGDGTFSVERSSGAVRLIGALQYEASAAYRLAIVARDSGVPQLSSTFTLLVHVQAEHD
NGPIFDTLTYRVEVREGVPVSTRFLQVRALARDAESMTLTYHLRADGDAASFGIMPESGW
LYVKSALDRETRDLYVLTVLASAGGSGAGGEARKTGTSTVRISITDENDNSPRLSEERYF
FTVPENQAPGSSVGRVMASDRDAGQNSRLTYRLLQHDPNFLIHTQTGELSTKHSLDREQQ
SSYQLLVIVQDGGAPPRSATGTIYVTVLDENDNTPAFLHVASGQELPVQVLEEKPSGLLV
ASLQAKDPDEGENGTIIYSLIGAWAERFTLHMATGELRTATVLRRADRAEYIFTVTASDR
GTVPRSTSAIIRIQVLPSSRVLPRPDATVLTLHPLEGVKPGSVIGSVAPPDAPARGQMTY
TVVGGGGDGTFVVDSVTGEIYAARELDYEAGARHVLQVSAEDTQHGYPSSRLVLVQIHVQ
DCNDQAPTFPEDPITIVVPENAQAGSSIFTFQALDGDGVGPNSQVRYALLHQEPPGAPFQ
LDSRSAAVSVMEDQPTGFVALHVVAQDNDLGENGRVSYSLRAGNSDGRFHLNPSTGALSI
VRALNREEVVQHNLTVVAMDHGFPRRSATQLLSVLVLDVNDEAPTFEKPEYEAHIMENLP
AGSPVLQVLATDRDLGANGQVSYGGLSGGPFSIHPQTGLIVTTHGLDREEQEQHVLMVYA
RDGGLPPNLSKATVRITVGDENDHTPHLESESCSVEVPENQSRVALYTLRATDPDGGENG
RLEYLVTDGDPRQDFSLDPVSGVLSTARALDREQVASYSLTVVVQDHGTPPRSATMSVHV
RVLDLNDNAPGFAQATYVVEVPEDLPVGALVLQLVAEDPDEGTNGQVSYYLGNESLGMFQ
VEPQSGRIRSAQALDRERHPSYSFLAKAVDSAPWEPKSAAVRVTVTVRDVNDHAPAFLHS
PLTVNLSRHTPLKQVVATMRAEDRDAGANASILYRLATPNSAFAINSYTGDIQLLQSLGS
LSQRQRTLFILATDLGQPALSSTGVVVIHLQEEPYRGLRFPRSTSDVALPENAAPGTAVA
SIQAMHTGGSSGRITYSIISGNEKNAFLIQPSSGAISVQDSSSLDFEASPRLRLVVQAET
AASFGFMAINLNLQDVNDNLPRFQLQNYVAFIWESQSYDSPVIQVSLDDLDQGANGQVTY
AINQSLPMTGLYHIDPQTGTITTAAILDREIWSQTRLVVTAMDRGTPPLVGSATLTVVVM
DINDNSPTIPFPWEVRVPENTLLGTQIAQLTGNDVDSGPTLSYTLTLDGDAVGTFSVLRY
GGRIALTGPLDYEQRSHYTLTLRASDTRHETEANLTVIVEDVNDNAPTFSQGFYQVTLPE
HTPAGSIILTVSATDPDSGSNGDVTFHLAVPSPDIAIDPSNGTLFTIRRVEFNASQPTLD
LVVEARDHGSPSLSSWTTVQLQVLDVNDHSPSFQVPRYNASVPEDLRPGTTVLTLEAGDA
HLSRENAGFDYTIVSGNGGNAFQVESRVAWAGGHLRTQGVLVLVEPLDFEAIPVYNLTVA
ASDRGLPQRSATVPVLVTVQDVNDNPPVFTRAEYRTAVSESAPPGTELLRVVAHDADSGP
RGHVHYSISSGDQHGLFQLHESTGALCLARPLDREAQALHALVVQATDVPGGHFALVPVA
IEVKDVNDNKPYFPVEVLSASMRENLPPGTLVTTLRAVDADTGVFGELRYTVLEQXSMAE
GRDAFAINSSSGELRSRLTFDYERTKAFQLLVRATDAGNASATVTVRVLVTGEDEYDPIF
LSPSFNFEVPEGARKGQSIGRVLATDEDEGADGVVLYSLAKPSPYFAINQTTGTIYLRVD
NT seq
6661 nt
NT seq
+upstream
nt +downstream
nt
gatcctgaacactactacttcatggtcactacagccaaggctaccactgattaccacatc
ctcatgcctttcctcacccaggtgacagccacagatgcagacagtggcacgtttggctcc
ctttcctactccattggttctggcatcggcagtgttgtccccacgcagttcagcattgac
aagcacacggggcagctgtgcactgttcagcctctggatcgtgatgagggcatgtctgcc
tatgatttcaccatcactgctgttgatgggggtggcctgaactccatggtgtatgtgaaa
gttttcctggaggacataaatgacaaccggccagtgttttacccgctggagtatgctgcc
agcatcagcacccagagcatgccaggtacagctgtgctgcgtgttactgcccacgacaag
gatgaggggctgcacgggaaagtgacctaccgcattgtcctgggaaactcaccccctctc
ttctcgctcaacaaggacacaggtgtcatctcgctctcatggtccctgagtggtaaagcc
aacaccttggtgcagctggtgatctctgcacaagatggtgggggcctacaggcacagcca
aatgcccgggtgaacatcagcatcgtggagggtacagtctcaccccctgtctttgagcaa
gctcagtacttcttcacagtgcctgaggacatgctgcagggtgccactgtgggggctgtc
cgcgcccagaaccctccaggtcatgctgatgacatcttttattccatctcctcgggagat
cctcatggctacttttccatcgactctgcctctgggcagctccacaccagcctgcctctt
gatcatgagtcccaggcagtcctcattctggatgtccaggcccgaagtggttcacctcct
gcctatagcaacacacgtgtgaaaatctctgtgtcagatgtgaatgacaatatgccattg
ttcccagccccctctgactccattctgctgccagaggccacagaacctgggactacagtg
tacactctgcaggccgaggaccgtgacagcggtgccaacggccaggtgaattttgagctg
gtgtcaggaggtgatggcaccttcagtgtggagcgctcatcgggggcggtgcgactgatt
ggggccctgcaatacgaagccagcgcagcctacaggctggccattgtggcccgagacagt
ggcgttccccagctcagctccacgttcacactgctggtgcatgtgcaagctgaacacgac
aatgggcccatctttgacacactcacctatcgcgtggaggtgcgggaaggtgtgcctgtc
tccacgcgcttcttgcaggtgcgggccctggcacgcgatgcagaatccatgacccttacc
taccacttgcgtgcagatggggatgctgccagctttggcatcatgcctgagagtggttgg
ctgtatgtcaaaagcgcactggaccgggagacacgggacctgtatgtactcacagtgctg
gcctcggcaggaggcagtggtgcagggggggaagcccggaaaacaggcaccagcactgta
cggatcagcatcactgatgagaacgacaacagcccccggctgagtgaggagcgttacttc
ttcactgttcctgagaatcaggctcctggtagcagtgtggggagggtgatggcaagtgac
cgggatgctgggcagaacagccggctcacctaccgtctgctccagcacgatcccaacttt
cttattcacacacagacaggggagctcagcaccaagcatagcctggaccgggagcagcag
tccagctaccagctcttggtgatcgtgcaggatgggggagcaccaccccgcagtgccaca
ggaaccatctatgtcactgtgctggatgagaatgacaacacccctgctttccttcacgtg
gccagtggtcaggagctgcctgtgcaggtgctggaagagaagccatcgggacttctagtc
gcctccctgcaggccaaggaccccgacgagggtgaaaatgggaccatcatctactcactg
ataggagcctgggcagagcgtttcacactgcacatggctactggagagttgcggactgcc
acagttctacgccgagcagatcgtgctgagtacatcttcactgtgacagccagtgaccgg
ggcacagtgcctcgcagtacgtcagccatcattcgcatacaggtactgccatcttcccgg
gtgctgccacggcctgatgccactgtgctgaccctgcaccctctcgagggggtcaagccg
gggtctgtgatcggctcagtggcacccccagatgcccctgcgcgaggacagatgacctac
acagtggtaggaggtggtggggatggcacctttgtggttgacagtgtgacaggggagatt
tacgctgcccgggagttggactatgaagctggggcacggcacgtgcttcaggtgagtgct
gaggacacgcagcatggctatccctccagccgactggtgctggtacagatccatgtgcag
gactgcaatgaccaggcgcccaccttccctgaagaccccatcaccatcgtggtgcctgag
aatgcccaggctggctcgtccatcttcaccttccaggcactggacggggatggtgtgggt
cccaatagccaggtgcgctacgccctgctgcaccaggagccccccggggctcccttccag
cttgacagccgctccgctgccgtcagtgtcatggaggaccagccaacggggttcgtggcg
ttgcatgtggtggcccaggacaacgatttgggagagaacgggcgtgtgagctactcgttg
cgagcaggcaacagtgacggccgcttccaccttaaccccagcactggcgcactctccatt
gtgcgggccctgaaccgggaggaggtggtgcagcacaacctgactgtggtggctatggat
cacggtttcccacgccgctccgccacacagctactgtccgtgctggtgctggatgtcaat
gatgaggctcccacttttgagaaacctgagtatgaagcacacatcatggagaacttgcca
gctggcagccctgtgctgcaggtgctggccacggaccgggacctgggtgccaatgggcag
gtctcctatgggggtctctctggggggccgttctccatccacccacagacggggcttatt
gtcaccacacatggcctggaccgtgaggagcaggagcaacacgtgctgatggtctatgca
cgggatggtggcctgccccccaatctctccaaggcaactgtgcggataacagtaggggat
gagaatgaccacacaccacacctagagagtgagtcctgctctgtggaggtccctgagaac
caaagccgcgtggcactctacaccctgcgggccaccgatcctgatggaggcgagaatggg
cgcttggaataccttgtgacagatggagaccctcggcaggatttcagcctagacccagtc
tccggtgtcctctccactgcacgtgcccttgaccgggagcaagttgcttcctacagcctc
acagtggtggtgcaagaccatggtacccccccgcgcagtgccaccatgtcagtccacgtg
cgggtgttggacctaaatgacaacgcacctggttttgctcaggccacctatgtggtggag
gtgccagaggacttgcctgtcggtgccctggtgctgcagctggtggctgaagaccctgac
gagggcaccaatgggcaggtctcttactacctgggcaatgagtcacttggcatgttccag
gtcgagccgcagagtgggcgcatcagaagtgcccaggcgctggaccgggaacgccacccc
agttacagcttcttggccaaggctgtggactcagcaccatgggagcccaagagtgcagct
gtgcgtgtcacggtcaccgtgagagatgtcaatgaccatgcccctgccttcttgcacagc
ccactcactgtcaacttgtcccgccacacaccactcaagcaggttgtggccaccatgagg
gcagaggacagggatgcaggtgccaatgcttccatcctgtatcgccttgccacccccaac
tctgccttcgcaatcaactcctacacaggggatatccaactgctgcagtccctgggctcg
ctcagccagcgccagcggacactcttcatcctggccacagacctggggcaaccggcactc
tcctctaccggtgtggtggtgatccatttgcaggaagagccctaccgggggctgcgcttt
ccccggagcaccagtgatgtggccctgccagaaaatgctgccccaggcacagccgtggca
agcatccaagctatgcacacagggggctcttctgggcgcatcacatacagcatcatcagc
ggcaacgagaagaacgctttccttatccagcccagttcaggtgccatctcagttcaggac
tccagcagcctggatttcgaggccagcccccgtctgcgccttgtggtccaggcagagaca
gcagcttcctttggctttatggccataaaccttaacctgcaagatgtgaatgacaacttg
ccacgcttccagctgcagaactacgtggcattcatctgggagtcacaaagctatgactca
ccagtcatccaggtatcactggatgatctggatcagggagcgaatgggcaggtgacttat
gccatcaaccagtccctgccaatgacaggcttgtaccacatcgatcctcagactggcact
atcactacggctgccatcctggacagggagatctggtcccagacccgtttggtggtaaca
gcaatggacagagggacgccgcctcttgtgggctctgccacgctgaccgttgtggtgatg
gacatcaatgacaatagccccaccatcccgtttccttgggaggtgcgggtcccagagaac
acgctgctgggcacccagatagcccagctgaccgggaatgatgtggactcaggacccaca
ctctcctacacgctcacgctggatggtgatgccgtgggcacgttcagtgtgctgcggtat
gggggacgcattgccctgacagggccactggactatgaacagcgcagccactacaccctc
accctgcgtgcctctgacacccgccatgagactgaggccaacctcaccgtcattgtggag
gatgtgaatgacaacgcaccgactttcagccagggcttctatcaggtgacgttgccggag
cacacgcctgcaggcagcatcattctcaccgtgagcgcaaccgacccagactcggggagc
aacggggatgtcacctttcacctggctgtgcccagccctgacatcgctattgaccccagc
aatgggactctcttcactatccggcgggtggaattcaatgccagccagcccaccctggac
ctggtggtagaggcccgtgaccatggctctcccagcctctcatcctggaccacagtgcag
ctccaggtgctggatgtgaatgaccacagccccagcttccaggtgccacgctacaatgcc
agtgtccctgaggacctgcgcccaggaaccactgtgctgacactagaggcaggtgatgcg
cacctctcccgggagaatgctggcttcgactacaccatcgtcagtggcaatggtggtaat
gcctttcaggtggagagccgggtggcctgggcaggggggcacctccgcacacagggtgtc
ttggtgcttgtggagcccttagactttgaggccatcccggtctacaacctcactgtagca
gcctcggaccggggcctgccgcagcgcagtgccacagtgcctgtgctcgtcaccgtgcag
gatgtcaatgacaacccacctgtgttcacccgagccgagtaccgcacagcagtgagcgag
agcgcaccccctggcacagagctgctgcgcgtggtggcccatgatgctgactcagggccc
cgcggccacgttcactacagcatcagctcaggtgaccagcatgggctcttccagcttcac
gagagcacaggggccctgtgcctggcacggcccctggaccgggaggcccaggcactgcac
gcacttgtggtacaggccacagacgtgccgggtgggcactttgcactggtacctgtagcc
atagaggtgaaggatgtcaacgataacaagccatacttcccagttgaggtgctgagtgcc
agcatgcgggagaacctgcctcctggcacactggtcaccacgctgcgtgccgtcgatgca
gacactggtgttttcggggaactgcggtacacagtgctggagcagnccagcatggcagag
ggccgggatgcctttgccatcaacagcagctctggggagctgcgctcccgacttaccttt
gactatgaacgaaccaaagccttccagctcctagtcagggccactgatgctggcaatgcc
tctgccacggtgaccgtgcgggtgctggtgacaggggaggacgaatatgatcccattttc
ctgagcccctccttcaacttcgaggtccctgaaggtgcccgcaaagggcaaagcatcggg
cgggtgctggcaacagatgaggatgagggggctgacggcgtcgtactgtactccctagca
aagccctcaccatactttgccatcaaccaaaccacaggcaccatctacctgcgtgtggac
a
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