Gavia stellata (red-throated loon): 104257696
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Entry
104257696 CDS
T08384
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04010
MAPK signaling pathway
gste04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104257696
04020 Calcium signaling pathway
104257696
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gste04040
]
104257696
Ion channels [BR:
gste04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104257696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104257696
NCBI-ProteinID:
XP_009810861
LinkDB
All DBs
Position
Unknown
AA seq
1368 aa
AA seq
DB search
EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDGRA
ASEGPIQPGTASSGSSYNMLKRAAIKKSKNDLIHAEEGEDHFTDICSVGSPFARASLKSG
KNESSSYFRRKEKMFRFFIRRMVKAQSFYWIVLCVVALNTLCVAMVHYDQPEKLTTALYF
AEFVFLGLFLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISV
LRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFN
FQDETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVRSGMFSSIYFIVLTLFG
NYTLLNVFLAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSPMSAANISIAA
KQQNSSKSKSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTLHIRPDMKTHLDRP
LVVEPRGEGRNNVSKLSPVDVQEVEQTKVSSTDGAEAPRKHHRHRDKDKLGEQEKGDVTK
DENGESGANNKEERHRQHRSRSKEVEGGSKEGKSDRNRSQEGGKRHHRRGSVEEGAEKEH
RRHRTHRHSAERQGKEGNGTINGARSERRSRHRGGSRSGNREGEPGSKGENGEEPHRRHR
FRNRALSTYDSVEKENGEKEGEAGEKEHRNHQPKENQCEIEASGSVSVPVHTLPSTYLQK
VPEQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAPPGETTVIPMNNVEFESKTEEKKD
VDDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAEDP
VQAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALV
AFAFSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLF
MFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEVEAQPREWKKYEFHYDNVL
WALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFV
ALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKMWKFVVSPP
FEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGVLNYFR
DAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGYTIRILLWTF
VQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDETSINRHNNFRTFLQALMLLFRSA
TGEAWHEIMLSCLSNRACDPLSGLTKNECGSDFAYFYFVSFIFLCSFL
NT seq
4105 nt
NT seq
+upstream
nt +downstream
nt
tgaatttgccaaagaacgagagagggtagaaaaccgtcgagctttcctgaaactccgtag
gcagcagcaaattgaacgggagctaaatggatatttggagtggatcttcaaagcagagga
ggtcatgctggcagaggaagacaagaatgccgaagagaaatctcctctggacgggagggc
cgcctcggaagggccgattcaaccaggcacggctagcagcggcagcagctacaacatgtt
gaaaagagctgcaataaagaagagcaaaaatgacctgattcatgctgaagaaggtgagga
ccatttcacagacatttgctccgttgggtctccttttgcccgtgccagtttgaagagtgg
gaagaacgagagctcgtcctacttcaggaggaaagagaaaatgttccggttcttcattcg
gcgcatggtgaaagctcagagcttctactggatcgtcctctgcgtggtcgccctcaacac
actctgcgttgcgatggtgcactatgaccagccagagaagctcaccactgcgctgtattt
tgcagagtttgtttttctgggtctgttccttactgagatgtctttgaagatgtatggact
gggaccaagaaattactttcactcttcattcaactgctttgactttggggtcatcgtggg
aagtatatttgaagttatttgggctgcagtgaaaccgggtacctcattcggcatcagcgt
attgagagctcttcgactgctgaggattttcaaagtaacaaagtactggaattccctgag
gaatctggtggtctccttgctgaactccatgaaatccatcatcagtttgctcttcctgct
cttcctgttcattgtggtgtttgctttgctggggatgcagctctttggaggacaattcaa
ttttcaagatgaaacaccaacgacgaatttcgataccttccctgccgccatcctcacagt
attccagatcctgacgggggaagactggaatgcggtgatgtaccacgggatcgagtcgca
ggggggcgtccgctcggggatgttctcctccatttacttcatcgtcctgacattgtttgg
taactatacactcctgaatgtcttcttggctattgctgttgacaatctggcaaatgccca
agagctgaccaaggatgaggaggagatggaagaagccaccaatcaaaagctcgccctgca
aaaggccaaggaagtggcggaagtcagccccatgtctgcagccaacatttccatagccgc
caagcagcagaactcctccaaatctaagtccgtttgggagcagaggaccagccagatccg
gatgcacaatttccgagccagctgcgaggcgctgtacaacgagctggatccggaggagcg
ggtgcgttacgctaccacccttcacatcaggccggacatgaagactcatttggatcggcc
gctggtggtagaaccaaggggcgaagggaggaacaacgtcagcaagctgagccctgtgga
cgtgcaggaggtggagcagaccaaagtcagctctactgatggggcagaagctccacgaaa
gcaccaccggcatcgggataaggacaaactgggagagcaagagaagggtgatgtgacaaa
ggatgagaacggggaatctggtgccaacaataaggaggagcggcacaggcagcacaggag
ccgcagcaaggaggtggaaggggggagtaaggaagggaaaagtgatcgcaacaggagtca
ggaggggggaaagaggcaccatcgccgagggtcagtggaagaaggtgccgagaaggagca
ccgtaggcatcggactcaccggcactctgccgaacggcaaggcaaggaaggcaacgggac
aatcaacggggccaggagcgagcggcgttcccgacaccggggagggtcaaggtctgggaa
ccgggaaggagagcccgggtccaagggcgagaatggagaagagcctcacagacggcacag
gttcaggaacagggcgctgtcgacgtacgattcggtggagaaggagaacggggagaagga
gggggaggctggtgagaaggagcaccggaatcatcagcccaaggagaatcagtgtgagat
tgaggctagtggaagcgtgagtgtccctgtgcacacccttcccagcacctatctgcagaa
agtgccggagcagccagaagatgctgacaaccagaagaacgtgacgcggatgattcagcc
acctctggacaaaaccaccactgtgaacatccccgtcactatcaccgccccgccggggga
aaccactgtcataccaatgaacaacgttgaatttgaaagtaaaacagaggagaagaaaga
cgttgatgacttgacgaaaaatgggcctaaaccaattttgccttacagttccatgtttat
cctaagtcctacaaatccgattcggcgtctcttccactacatcgtcaacctgcgctattt
cgagatggtcatcctcatagttatagccctcagcagcattgccctggctgcagaagaccc
tgtccaagctgagtccccgaggaacgatgctctgaaatacttggattatatatttacggg
cgtctttacctttgagatggtcatcaagatgattgacttggggctgttactccaccctgg
ctcctacttccgtgacctgtggaatatcctggacttcattgtggtcagtggggccttggt
ggcatttgccttctcaggaaccaaaggcaaggacatcaacacaatcaagtcgctgcgagt
tctgcgggtcctaagacctctgaagaccattaaacggctgccaaaactaaaggctgtctt
tgactgcgtggtgaattccctgaagaacgtcctcaatatcctcatagtttacatgctctt
catgttcatttttgccgtcattgctgtgcagctcttcaaaggcagattcttctactgcac
cgatgagtcgaaggagctggagaaggactgcaggggtcagtacctcgattatgaaaaaaa
tgaggtggaggcgcagcccagagaatggaaaaaatatgagtttcactacgacaatgtgct
ctgggctctgctcacgctcttcaccgtctccacaggcgaagggtggccaactgtgctgaa
gcactcggtggatgctacctacgaggaacagggtcccagccctggctaccgaatggaaat
gtctatcttttacgtggtgtattttgttgtcttcccttttttctttgtgaacatctttgt
ggcattaatcatcatcaccttccaagagcaaggagataaagtgatgtcagagtgcagcct
tgagaaaaacgagagggcctgcatagacttcgccataagtgccaagccactgacccgcta
catgcctcagaacaagcaatcttttcagtacaagatgtggaaatttgtggtgtcccctcc
ctttgagtattttatcatggtcatgattgcactcaataccattgtcctaatgatgaagtt
ctatgatgctccagaagcatatgaagaaatgttgaaatgcctgaatattgtgtttacatc
catgttttcaatggaatgtgtgctgaagatcattgcctttggtgtgctgaattatttccg
agatgcctggaatgtctttgattttgtaacagtgttgggaagtattactgatattttagt
aacagagattgcggacacggacaacttcatcaacctcagcttcctgcggctcttcagggc
agcgagacttatcaagctccttcgccagggttacactatccgcatcttgctctggacgtt
tgtgcagtcttttaaggccttgccttatgtgtgtctcctcattgcaatgctcttcttcat
ctatgccattattggcatgcaggtatttggaaacattgcgctagatgatgaaacctccat
taatcggcacaataacttccgtaccttcctccaagccctgatgcttctgttcaggagcgc
cacgggggaagcctggcacgagatcatgctgtcgtgcctgagtaacagagcctgcgaccc
gctctccggcctcaccaaaaacgaatgtggcagcgattttgcctatttctactttgtgtc
gttcatcttcctgtgctccttcctg
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