Gavia stellata (red-throated loon): 104257862
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Entry
104257862 CDS
T08384
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104257862 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gste02000
]
104257862 (SLC6A4)
Transporters [BR:
gste02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104257862 (SLC6A4)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
DUF2532
DUF3439
Motif
Other DBs
NCBI-GeneID:
104257862
NCBI-ProteinID:
XP_009811079
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All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MEKKATSNETEPLTSRKDVSDCNEGEDCKENGLLVRNPKSALRLVEDGNKVHPTQGDKGE
AAQISNGYSGVQSSVPCSGVGEVEDAQCAAPAAMTTTTTTTSTTCGAEGQQQLMELEDRE
TWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALG
QYHRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLISSFTVELPWTSC
TNVWNTGNCTNYFSKDNVSWTLHSISPAEEFYTRHVLQAHRSNGLDDLGGISWQLTLCLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYVILFILLVRGATLPGAWRGVLYYLKPDWQKL
LATEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCVTSFVSGFVIF
TVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTF
AGLEGVITGVLDEFPHVWSKRRELFVLGLTIVCFLGSLATLTFGGAYVVKLFEEYATGPA
VLTVVFLEAVAVAWFYGITQFCNDVKEMLGFTPGWYWRVCWVAISPIFLLFVTCSFLSNP
PALRLFDYNYPYWTTVVGYCIGTSSIICIPIYMVYRLIITPGTLKERILKSITPETATEI
PFGDIRMNAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggcaacgagcaatgagacggagccgctgacttccaggaaagatgtctca
gactgtaacgagggagaagactgtaaagagaacggacttctggtcaggaaccctaaatct
gccctacggctagtggaggatggcaataaagtccatcctacccagggagataaaggggag
gcagctcagatctcaaatggttattcaggggttcagagctcggttccctgcagtggagtg
ggcgaggtggaagatgctcagtgcgctgccccagcagccatgaccaccaccacgaccacc
acttcgaccacctgcggagcagaaggccagcagcagctgatggagctagaagacagagag
acctggagtaaaaaaatggactttctactctccgtcattggatatgcagtggatctggga
aatgtgtggagatttccttatatatgctatcaaaacggaggaggagcattcctcattcct
tacacaattatggccatctttggagggattcctctcttctatatggaactagcattagga
cagtaccacaggaatgggtgtatttcaatttggagaaaaatatgtcctatattcaaagga
attggcttcgccatctgtataatagatctttacgtagcctcgtactacaacaccattatg
gcttgggccttttactacctcatctcctccttcacggtggagctgccatggactagctgc
acaaacgtttggaacacgggcaactgcactaactacttcagcaaggacaacgtcagctgg
accctgcactccatctctcccgcagaagaattttatacccgccacgttctacaggcgcac
aggtccaatgggctggatgacctggggggcattagctggcaattgaccctctgtttattg
ttaatcttcaccattgtatacttcagcatctggaaaggggtcaaaacatctggcaaggtg
gtatgggtgactgccacattcccatacgtcatactctttatcctgctagtgagaggtgca
actttgcctggggcttggagaggtgtcctctactacttgaaacctgactggcagaaactc
ctggccactgaggtttgggtggatgcagcagctcagatatttttctcccttggtccaggt
tttggggtcctattggcttacgccagctacaacaaattccataacaactgctaccaagat
gctctggttaccagtaccgtgaactgcgtgactagttttgtgtctggattcgtcattttc
actgtgctggggtacatggcggagatgaggaatgaagacgtttcagaggttgccaaagat
actggacccagccttctcttcattacgtatgctgaggccattgcaaacatgcctgcttcc
actttctttgccatcatctttttcctgatgttactcacgctgggattagacagcacgttt
gcaggactagagggagtgattactggagtactggatgaattcccgcatgtctggagcaaa
cgcagggaattgtttgtccttggtctgaccatcgtttgctttttggggtcactagcaacc
ctgacatttggaggcgcatatgtggtaaagctgtttgaagaatacgccactggtccagct
gtcctaacagtcgtgtttctggaagcagttgctgtggcctggttctacggcatcacccag
ttttgcaacgatgtgaaagaaatgctaggctttaccccaggctggtactggcgagtttgc
tgggtagcaattagtcccatcttccttctgtttgtcacttgcagctttctgtcgaatcct
cctgcgctacggctttttgattataattatccctactggaccacagtagtgggttattgc
ataggaacctcttctatcatctgtattccaatctacatggtttatcggttgatcatcact
ccaggaacacttaaggagcgtattctgaaaagcattactccagaaacagctacagaaatt
ccttttggagacatccgcatgaatgcagtataa
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