KEGG   Gavia stellata (red-throated loon): 104257867
Entry
104257867         CDS       T08384                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
gste  Gavia stellata (red-throated loon)
Pathway
gste03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gste00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104257867 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gste03041]
    104257867 (SF3A1)
Spliceosome [BR:gste03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104257867 (SF3A1)
 Complex B
    104257867 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    104257867 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 104257867
NCBI-ProteinID: XP_009811084
LinkDB
Position
Unknown
AA seq 768 aa
PEEEPKEEAAPAKPVVGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFL
NPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQSAQQQLPQKVQAQVIQETVVPKE
PPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLF
NYFTKLVEQYTKILIPPKGLLLKLKKEAENPKEVLDQVYYRVEWAKFQERERKKEEEEKE
KERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEELGARILIQERYEKFGESEEVEM
EVESDEEDEKQEKTDEPPAQLDQDTQVQDMDEGSDDEDEGQKVPPPPETPMPPPLPPTPD
QVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRS
IREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEEIQKPEEKVTWDGH
SGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKEKIGPSKPNEMPQPPPPSSASNP
PASAQPITSVPRPPTMPPPVRAAVVSAVPVMPRPPMTSVVRLPPGSVIATPMPPIIHTPR
INVVPMPPSAPPIMSPRPPPMIVPTAFVPAPPVAPVPSPAPMPPVHPPPPMEDEPVSKKL
KSEDSLIPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLNGQVLVFTLPLSDQVSVIKVKIH
EATGMPAGKQKLQYEGIFIKDSNSLAYYNMTSGSLIHLALKERGGRKK
NT seq 2307 nt   +upstreamnt  +downstreamnt
ccagaagaggagccaaaagaggaagcggcaccagccaagcctgtggtaggaattatttac
cctcctccagaggtcaggaatattgtggacaagactgccagcttcgtagccagaaatggt
ccagaatttgaagctcgaattcgtcagaatgaaataaataaccctaagttcaatttcttg
aatcccaacgatccttaccatgcatactaccggcacaaagtcagcgagttcaaggagggt
aaagcacaggagccctcggctgccattcccaaggtcatgcaacagcagcaaagtgctcag
cagcagctcccgcagaaggtgcaggcccaggtgatccaggagacagttgttccgaaagag
ccgcctccggagttcgagttcattgcagatcctccctcaatctcggcctttgacttggat
gtggtgaagctcacagcgcagttcgtggctcggaacgggcggcagttcttgactcagctg
atgcagaaagagcagaggaactatcagtttgacttccttcgcccccagcacagtctcttt
aactacttcactaagctggttgaacagtacacaaagatcttgatcccaccgaaaggctta
ctcctcaaactcaagaaagaggctgaaaatcccaaggaggtcttggatcaggtgtactac
agagtggagtgggcaaagttccaggagcgagagagaaagaaggaagaggaggagaaggaa
aaggagcgtgttgcttatgcccagattgattggcatgactttgtggttgtggaaacagtt
gactttcagcccaacgagcaagggaatttccctcctcccaccacgccagaagagttggga
gctcgaatcctgatccaggagcgttatgagaagtttggggaaagtgaggaggtagagatg
gaggtggagtcagatgaggaagatgaaaagcaagagaaaacagatgagcccccagcccag
ctggatcaagacacacaagtgcaggatatggatgagggctcagatgatgaagatgaaggt
cagaaggttcctcctcctccagaaaccccaatgccaccacctcttcctcccacaccagat
caggtcattgtgcggaaagattacgatcccaaagcctcaaaaccattaccacctgcccca
gctccagatgagtatcttgtttcccccattactggagagaaaattcctgccagtaaaatg
caagaacacatgcgaattggtctcctggatcctcgatggttggagcagcgcgatcgatcc
atccgtgaaaagcagagtgatgatgaggtctatgccccaggtttggatatcgaaagcagc
ttgaagcagctggcagagcgccgtactgatatctttggtgtagaagagactgccattggt
aaaaagatcggtgaagaagaaatccagaaaccagaggaaaaggtgacctgggatggccac
tcaggcagcatggcccgcacacaacaggctgctcaggccaacattactctccaagagcaa
attgaagctatccataaggccaagggactggtgccagaagacgacagcaaggagaagatc
ggtcccagcaaacccaatgaaatgccccagccaccccctccttcatcggcatcaaatccc
ccagctagcgctcagcctatcacgtccgtgcctcgtccacccacgatgccccctcccgtt
cgcgccgctgttgtttctgcagttccagtcatgcctcgtcccccgatgacttctgtggtc
cgtttgcctccaggatccgtcatagccacccccatgccaccgataatccataccccgcgc
atcaacgttgtccccatgccgccctctgctcctcccatcatgagtccccgcccgcctccc
atgatagtaccaacagcatttgttccagcacctcccgtggctccggttccttccccagca
ccgatgcctcctgttcacccgccgccaccgatggaggatgagccagtctcaaagaaactc
aagagcgaagacagcctgattccagaggaggagtttctgcgcaggaacaagggtccggtc
acggtcaaagtccaggttcccaacatgcaggacaagacggaatggaaactgaacggccaa
gtgctggtgttcaccctgccgctctcagaccaggtgtctgttataaaggttaagatccac
gaggccaccgggatgccagctgggaaacagaagctgcagtacgagggcatcttcatcaag
gattcgaactccctggcttattacaacatgacaagtggctctctgattcacctggcactc
aaagaaagaggaggcagaaagaaatag

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