Gavia stellata (red-throated loon): 104257960
Help
Entry
104257960 CDS
T08384
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104257960 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104257960 (EDC4)
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104257960 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
104257960 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
104257960
NCBI-ProteinID:
XP_009811192
LinkDB
All DBs
Position
Unknown
AA seq
1377 aa
AA seq
DB search
SVNENQRPSNSYNGDLNGLLVPDPIVAGDGPSLAKPVHRSISLGALQEKQVICLSGDDSS
TCVVISAKDVEIVASSDSSITSKARGSNKVKIQPVARYDWEQKYYYGNLIAVSNSYLAYA
IRAASNGSAMVRVLSVSTAERTLLKGFTGGVADLAFAHLNSNQLACLDEAGNLFVWRLAM
DKEKIQEEILVNIKRPDNTPLNTFRRIIWCPFIPDDNEESGEEGSQTLALLHEDRAEVWD
LDIIRTNNSSWPVEVPSIKEGFIVVKGHSTCLSEGALSPDGTVLATASHDGFVKFWQIYI
EGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVSW
TCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYLILSDVQRKVLYVMELMQNQEEGKAYFS
SISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAEEENDNLSVETPLRCFSGALESAAGVLI
KLFCVHTKALQDVQIRFQPLHSPDMSASMPSHGAHEEFAFPDHMADLSTEGLGSEKGSVH
GSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDAFMTPSTSLQQIAVSPGSSVSSLTAVT
AMSSTSVTDASMPRPSEDLTVSPKMQLDTSLTLSSSSSSLQTSPRSHSVLIPGLPDKLTP
KGPVPVTPGNPSLALELQEVEPLVVPQASPTRERSPDVISSASTAMSQDIPEIASETLQR
SFAGAPSGLPAEVLEPSHHADSMASAASALHLLSPRNRHNSEHSHHSLDMPPVEVDRLNA
PSLLETALTQENASSDSVVSQPWPAAPDITRETRNSMADSPRDEVEEKHKSSSYHRHSYH
MLQHDSQDASAEQSDHDDEVASLASTSGGFGAKASTQRLPVKDWKAKASPRASPKLKRKG
KKDDGDVNQSPRSANNQVTPEFQDELMCILRSQQRELSELRQNQMELLQRLTDHLDAIQS
SLMGHVERVIDSQQEQEQRRLDRALTEGQQRNGQLQEHLSQQLSQSLSTAVCNRLERTIR
EEMKKTVPQCISKSMDPIAGQLSNTIAAKLTAVEGTLKESITKLVKSKNLTDTVVRATAD
TLQGPIQSAYREAFQSVGLPTFEKSCQSMFQQINDTFKQGTQEYIQQLETHLKNKKVREQ
EARDPLLNQLRQLIGTFQSATEQLASTVAASVHAEVQHQLHIIVGNMQESILAQVQRVIK
GEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSAHLDFQSQQTHILQLLQQGHLNQAFQQA
LTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLLSLIQQLSSDLGTRTELKLNYLEEAV
MHLDHSDPITRDHMGSVMNQVRQKLFQFLQVEPHNTLSKPARRLMIMLQGLVTPGMT
NT seq
4136 nt
NT seq
+upstream
nt +downstream
nt
gttcagtgaatgagaaccagaggccgtcaaattcgtataacggagacctgaatggactgt
tggtgcctgatcccatcgtggctggagatggaccttctttggctaagccagtgcatcgca
gcatttctctgggagccctgcaggagaagcaagtcatctgcctttccggtgatgacagct
ccacttgcgtagtgatatcggcaaaagatgtggagatagtggccagcagtgattccagca
tcaccagtaaggccagagggagtaacaaggtgaaaatacagcctgttgctagatatgact
gggagcagaaatactattatggcaatctgatagctgtttcaaactcttacctggcttatg
ccattagagctgccagtaatggctccgctatggtgcgggtgttgagcgtcagcactgctg
agcggaccttgctgaaaggattcacaggcggtgtggcagatctggcttttgctcatctca
actccaaccagctggcgtgcctggatgaggccggcaacctttttgtctggcgcctggcca
tggataaagaaaaaatccaagaggagatcttggttaacatcaagcgacctgacaataccc
cgctgaacacctttcgaagaatcatctggtgccctttcatcccagacgataatgaggaga
gtggtgaagagggaagtcagacactagcgttgttgcacgaggacagggcagaggtgtggg
atctggacattatccgaacgaacaacagctcctggccagtggaagtgcctagcatcaaag
aaggcttcatcgtagtgaaaggccacagcacgtgcctgagcgaaggagcactttctccag
atggaactgtgttggccacagcaagccatgatggttttgtcaaattctggcagatctata
ttgaggggcaagacgagcccaggtgtcttcatgaatggaaaccccatgatggtaggcctc
tttcctgcctgctcttctgtgacaaccataaaaaacaagacccagaggttcccttctgga
gattcctcatcacaggagcagatcagaatagagaactgaagatgtggtgcactgtgtctt
ggacctgtctgcaaactgtccgcttttctcctgacatcttcagctccatgagtattcttc
ccagcctgaaagtctgcctggacctctccgctgaatatctgatactgagcgatgtgcaga
gaaaagtattatatgtgatggagctgatgcagaaccaagaggagggcaaagcttacttca
gctccatctctgagttcctccttacccacccagtcctaagctttggcatccaggcagtga
gccgctgccggttaaggcacaccgaagtcctcccagcagaagaggagaatgacaacttga
gtgtagaaactccactgaggtgtttctctggggctcttgaatcagcagcaggcgtgctga
taaaactcttctgtgtgcacaccaaggctctgcaggatgtgcagattagattccagcctc
ttcatagccctgacatgagtgcatccatgccttcccatggcgctcatgaagaatttgcct
ttcccgaccacatggctgatctaagcacagaagggctgggatctgaaaaaggatcggtgc
atggctctcaaccagacctgcggcgtattgctgatctgcctgtaccagcagactttctgt
ctctctcaaatgatgccaaacctaagctgatgactccagatgcattcatgacaccaagta
catctcttcaacagatcgctgtatctccaggcagcagcgtcagttccctgactgcagtca
cagccatgagtagcacttctgtcacagatgcctctatgcccaggccatcagaggacttga
ccgtgagccccaagatgcagctggacaccagcctcacactgagtagcagtagcagcagtc
tccagacaagtcctaggagccattcagttcttatcccaggcctgcctgacaagctaacac
caaagggacctgttccagtcacgccaggaaacccctctctagcgctggaactgcaggagg
tggagcccttggtggtgccccaggcttctcccacccgcgagcgctcgccagacgtcattt
cctctgcttccacagccatgtcccaagatatcccagaaattgcttccgagaccttgcaac
gcagctttgcgggagctccctctgggctccctgcagaggtgctggagcccagtcatcacg
cagatagtatggcatccgctgcctcagccttgcatttactgtctccgaggaaccggcaca
attcagagcacagccaccactctttggacatgcctccagtggaggtggacagactgaatg
ctccatcgttactggagactgctttaactcaggaaaatgcatcttctgacagtgttgtga
gtcagccgtggccagcagctcctgacataaccagagaaaccaggaacagcatggcagaca
gcccaagggatgaggttgaagaaaagcacaagagctcttcctatcatcgacacagctacc
acatgctgcagcatgacagccaggatgctagtgcagaacaaagtgaccatgatgatgaag
ttgcaagcttggcttctacatcaggtggatttggtgccaaagcgtctacgcagaggctgc
ctgtgaaggactggaaagccaaggcatcccctcgggcttccccaaagctaaagcggaagg
gcaagaaagatgacggggatgtgaaccagtcgccaagatcggctaacaaccaggtgacac
cagagttccaggatgagctgatgtgcatattgaggagccaacagcgggagctctccgagc
tgcgtcagaaccagatggagctgctgcagagactcacggatcaccttgatgctattcaga
gctcccttatgggccacgtggagagggtgattgactcccagcaggaacaggagcagagaa
gactagaccgagcgctgacggaaggacagcagcgtaatgggcagctccaggagcatctgt
ctcagcagctctctcagtccctttccactgctgtgtgtaaccgtctggagaggaccattc
gtgaggagatgaagaagaccgtaccccagtgcatttccaagagcatggaccctattgctg
gccagctaagtaacactattgctgccaagctcactgctgttgagggaacgctgaaagaga
gtatcaccaagctagtgaaatcaaagaaccttacagatactgttgtgagggcaacggccg
ataccctgcaggggccaatccagtcagcttacagggaagcgtttcagagcgtcgggttgc
caaccttcgagaagagctgccagtccatgttccagcaaatcaatgacaccttcaagcaag
gcacacaggaatatatccagcagcttgagactcacttgaagaacaagaaggtacgagaac
aggaggcccgcgacccgctgctgaatcagcttcgacagctcatcggcaccttccagagcg
ccaccgagcagctggcttccactgtcgcagccagcgtccatgctgaggtgcagcatcagc
tgcatattatcgtgggcaacatgcaggagtctattttggcccaggtgcaaagagtcatta
aaggagaagtgagcctggctatgaaggagcagcaagcagctgtcacctcgagcatcgtcc
aggcaatgcgctcggcagccgggactccgatcccctctgctcacttggatttccagtctc
agcaaactcacatccttcagctgctccagcagggacacctcaaccaagctttccagcagg
ctctaacagcagctgatctcaacctggtcctgtatgtctgtgagactgtggatactcagc
aagtatttggacagcatccgtgcccactgtcccagcctgtgctgctctctctcattcagc
agctctcctcggatttgggtactcgtacagaactgaagttgaattacctggaggaagcgg
tgatgcacctggaccacagtgaccccatcacccgagaccacatggggtcagtcatgaacc
aggtgcggcagaagctcttccagttcctccaggtggaaccccacaacacgctgagcaaac
ctgcccgtcgcctcatgatcatgctccagggtctggtcacccctggcatgacctag
DBGET
integrated database retrieval system
