Gavia stellata (red-throated loon): 104258105
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Entry
104258105 CDS
T08384
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 10-like
KO
K20307
trafficking protein particle complex subunit 10
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gste04131
]
104258105
Membrane trafficking [BR:
gste04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
104258105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
NTS_TR130
UFD1_N1
Motif
Other DBs
NCBI-GeneID:
104258105
NCBI-ProteinID:
XP_009811378
LinkDB
All DBs
Position
Unknown
AA seq
1232 aa
AA seq
DB search
AGDQNLFTSLYPTLSQQLPREPMEWRRSYGRAPKMIHLESNFVQFKEELLPKEGNKALLT
FPFLHIYWTECCDTEVYKTTVKDDITKWQNVLKAHNSVDWLIVVVESDAKKKNKTNILPR
TSIVDKIRNDFCNKQSDRCVVLSDPLKDSSRSQESWNAFLTKLRTLLLMSFTKNLGKFED
DMRTLREKRTEPGWSFCEYFMVQEELAFVFEMLQQFEDALVQYDELDALFSQYVVNFGAG
DGANWLTFFCQPVRSWNGLILRKPIDMEKRELIQNQEATLLDLRSYLFSRQCTLLIFLQR
PWEVSQRALELLHNCVQELKLLEVSVPPGALDCWVFLSCLEVLQRIEGCCDRAQIDANVS
HTVGLWSYATEKLKSLGYLCGLVSEKGPNSEDLNRTVDLLAGLGAERPETANASQSPYKK
LKEALSSVEAFEKHYLDLSHATIEMYTNIGRIRSAKLVGKDLAEFYMRKKGPQKAEVYLQ
GALKTYLAEGWALLVTHTRKQLAECQKHLGQIENYLQTSSLLAGDNHLTEDERKSFCQEI
LDFANQQAENQGQKVILPMHSFAQLKTLHFDPPNAVVHVGGKLSIELTLLSQMPIPVQVD
QISIHVHFSIEKNSYRKTAEWLTKHKTSNGVISFPNEVAGFPLSRNNLPALELYEMYERS
PSDMXIICKNVHMLLRRQESSSSLDMPSGVTLEDGAHVLKCNNLILEPGVNKITFSTQAK
EPGTYTLRQLCTSVGKVQFVLLHIYPIVQYDVYSQEPQLKVEPMTDSLLAGIPQKVKFTV
TTGHYTMKNGDTLQLSNADAMPILYHQGTSKAVIYSNTREKISESSLRIQSSEKITSIGL
PVAPAYHVIEFELEVMYLPSATESAAEKENTTNKEVHRKNKEKQKQDNCMATVDQKVTID
CPWSIYSTIIALTFCIPFNAKHSLLSAGKRKYVQVCVQNLSELCFQLSDNSLKNSADCTD
LQLVPLNPESQQVIYSKQSIFFVWELKWTKELPLSLQCLFSVSFCPATSEEQSFTLKPFT
YEFQVENFFTLYHVKTEIFPPLGAEYCKTGSLCSLEVSITRLVDLSEVDRDEALTESDGY
CTTKLMYEVVDNSSNWAVCGKSSGVISMPVAARATHKVHMEVMPLFAGYLPFPDVRLFKY
LPHHSAHSMQLDADSWIENDNLSVDKNVDDQADSSSIRSRGSLHSAASGEHKGLPMPRLQ
SFSSGQVFNCSTGMQVLVIPSKDDHVLEVNIT
NT seq
3701 nt
NT seq
+upstream
nt +downstream
nt
gtgctggagatcagaatttatttacttccttatatcctacgctttctcagcagcttccta
gagagcccatggaatggaggaggtcttatggccgtgctccaaagatgattcatctagaat
ctaactttgttcagtttaaagaggagctactacccaaagaagggaataaagcccttttga
cttttccttttcttcatatttattggacagaatgttgtgacacggaagtgtacaaaacta
cagtcaaggatgacatcaccaagtggcagaatgttctcaaagctcacaactcagtggact
ggctaattgtggtagtcgagagtgatgccaagaaaaagaacaaaacaaatatccttcccc
gaacctctatagtagataaaataagaaatgacttctgtaacaaacaaagtgacagatgtg
tggtactttctgaccctttgaaagactcttcccgttctcaggaatcttggaatgcctttc
tgactaaactccggacattgcttctcatgtcttttaccaaaaacttaggcaagtttgaag
atgacatgagaactttgagagagaaaaggactgagccagggtggagcttctgcgagtatt
tcatggtccaggaagaattggccttcgtttttgagatgctgcagcaatttgaggatgcgc
tagtgcagtatgatgaactggatgccttgttttctcaatatgttgtcaacttcggggctg
gtgatggtgcaaactggctgacatttttttgccagccagtgaggagctggaatggtttaa
ttctccgaaagccaatagacatggagaagagagagctaattcagaaccaagaagctactc
tactggacttgcgtagttacctgttttctcgccagtgcacattattaatcttcctgcaga
ggccatgggaggtttcccagagagcactggagcttcttcacaactgtgtgcaagaactca
agctattagaagtctctgttcctcctggagctttggattgttgggtatttttgagttgtt
tggaagtcttacaaagaatagaaggctgctgtgatagggctcaaatagatgcaaatgttt
cccacacagttggcttatggagctatgccactgagaagttaaaatctctgggttatctgt
gtggacttgtgtcagagaagggacccaattcagaagaccttaacagaactgtcgatctgt
tagcagggttgggagcagaacgccctgaaacagccaatgcatcacagagcccttacaaga
aacttaaagaggccttatcatctgtagaagcttttgaaaaacactacttagatctgtccc
atgccaccattgaaatgtacacaaatattggaagaattcgctcagctaagcttgtgggaa
aggacttggcagagttttatatgaggaagaaaggtccacagaaggcagaagtctatctgc
aaggagcactgaaaacttaccttgctgagggctgggcattgcttgtcacacatacgagaa
aacagttagctgaatgccagaaacaccttgggcaaatagaaaattatcttcaaacaagca
gccttttagctggtgataatcacttaacagaagatgaacgcaaaagcttttgccaagaaa
tactagattttgccaatcagcaagcagagaaccaaggtcaaaaggttatactgcctatgc
actcctttgcgcagttgaaaactctacattttgaccctccaaatgctgttgtccatgtgg
gtggaaagttatctattgagttgactttgctgagccaaatgcccatccctgtccaagtgg
atcagatttccatccatgttcacttcagcattgaaaaaaatagttacagaaaaaccgctg
agtggctcactaagcacaaaacttccaatggtgttatcagctttccaaatgaagttgcag
gctttcctttgtcaagaaacaacttgccagcactggaactatatgaaatgtatgaacgga
gtccctcagatatgnnaattatctgcaaaaatgtacacatgctactacgaaggcaagaga
gcagcagttcgctggatatgccctcaggggtgactttagaagatggggctcatgtgttga
aatgcaacaacttaatactggaaccaggggttaataaaataacattcagtactcaggcca
aagaacctgggacatacacgctcaggcaactgtgcacttcagtggggaaagtacagtttg
tccttcttcatatttacccaattgtgcagtatgatgtatattctcaggagccccagctaa
aagtggaaccaatgactgatagccttttggctggcattccccagaaggtgaaattcacag
tgactactggtcactacaccatgaagaatggggatactttgcagctcagtaatgcggatg
ccatgcctattctgtaccatcaaggtaccagcaaggcagtgatctattccaacaccagag
aaaagatctcagaatcatcattaaggattcagtcttctgaaaagatcacaagcatcggtt
tgccagtagctcctgcctatcatgtgattgaatttgaactagaagtcatgtatttgccat
cagccacagaatctgcagcggagaaagaaaatactacaaataaagaagttcacagaaaaa
acaaagagaagcagaaacaggacaactgcatggctactgttgaccaaaaagtaaccattg
attgcccttggtcaatttactccactattattgcattaacattctgcataccttttaatg
ccaagcattccttgttgtcagctggcaaacggaaatatgtgcaagtctgtgtacagaatt
tgtcagaactctgtttccagctttcagacaacagcctaaaaaattctgctgactgtacag
atttgcagctggtacctctgaaccctgaatctcaacaggtcatatacagtaagcaatcaa
tattctttgtatgggaattgaagtggacaaaagagcttcctctctccttgcagtgcctgt
tttcagtcagcttttgtccagctacctctgaagaacagtcttttaccctgaagccgttca
cttatgaattccaagtggaaaatttttttacattgtatcatgtgaaaacggaaatttttc
cgccactgggggcagagtattgtaaaacaggctcactctgctctttagaggtgtcaatca
cccgacttgttgacctctcagaggttgacagagatgaagcattaacagaatcagatggat
attgcacaacaaaacttatgtatgaagttgttgacaacagtagtaactgggcagtctgtg
gaaaaagttctggagtgatatctatgcctgtagcagctcgagcaactcacaaagtccaca
tggaagtgatgccactgtttgctggatatctaccttttcctgatgtcagattgtttaaat
acctccctcaccattctgctcactccatgcaacttgatgctgatagctggattgaaaatg
ataacctatctgtcgacaagaatgtggatgatcaagctgacagcagcagcataaggagca
gaggcagcttgcattctgcagctagtggggaacacaaaggtttgccaatgccccgtctgc
aatccttttcatctggtcaggtcttcaactgcagcacgggtatgcaagtacttgtcattc
ccagcaaggacgaccatgttctggaagtcaatatcacgtga
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