Gavia stellata (red-throated loon): 104258313
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Entry
104258313 CDS
T08384
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-4-like
KO
K06525
integrin beta 4
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04382
Cornified envelope formation
gste04510
Focal adhesion
gste04512
ECM-receptor interaction
gste04518
Integrin signaling
gste04810
Regulation of actin cytoskeleton
gste04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104258313
04518 Integrin signaling
104258313
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104258313
09142 Cell motility
04820 Cytoskeleton in muscle cells
104258313
04810 Regulation of actin cytoskeleton
104258313
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104258313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gste04147
]
104258313
04515 Cell adhesion molecules [BR:
gste04515
]
104258313
04090 CD molecules [BR:
gste04090
]
104258313
Exosome [BR:
gste04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104258313
Exosomal proteins of bladder cancer cells
104258313
Cell adhesion molecules [BR:
gste04515
]
Integrins
Integrin beta subunits
104258313
CD molecules [BR:
gste04090
]
Proteins
104258313
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
EGF_integrin
I-EGF_1
EGF_Teneurin
EGF_TEN
Pur_ac_phosph_N
EGF_2
FN3_DSCAM-DSCAML_C
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
104258313
NCBI-ProteinID:
XP_009811655
LinkDB
All DBs
Position
Unknown
AA seq
1522 aa
AA seq
DB search
NLCVLSRAKSCTECIRVDKDCSFCTDENFSINMSLQRTQVSPQGMFMRLRAGEEMNFNMD
VFQPLESPVDLYILMDFSYSLSDDLDNLKSMGQNLAGFLQALTSNYTIGFGKFVDKVSSP
QTDMRPEKLREPWNNADSPFSFKNVIRLTNDINYFIRELRKERISGNLDAPEGGFDAILQ
TAVCKDKIGWRNDSTHLLVFSTESAFHYEADGTNVLAGILARNDERCHLDTRGTYMYDTK
QDYPSVPTLVRLLGQHNIIPIFAVTNHSYSYYEKLHKYFPISEIGVLQEDSSNIVELLRT
AFERIRSKMDIRADFVPKAMKTEFTSSMYEKTESGSFHIARGEVGKFNMRVKALEYIGGQ
HVCSLPEKDRQGVXXXXXXXXXXXXSDSLKVTASVICDVCPCEQQQDFNSPKCSFHGDFV
CGQCICHAGWRGDTCDCSPASSPNNEACIRPGDVEPCSGRGECLCGKCQCYSEDLTQRFD
GAFCQYDVLQCPRTSGFLCNDRGRCSKGACMCESGWEGPGCECPTSNDTCIDSRGGICNN
HGRCECGRCICDKASLYTSSTCEISYSLGFQAVCQSIRDCVRCQAWGAGNRKGNCSTCHL
QIQMVEELKKEEASEYCSFQDEEDDCTYHYTLEGDPTVLPNTTVHVQKKKDCPPGSFLWL
IPLLIFLILLLGLLLLLCWKFCACCKACLALLPCCARGRTVGFKEDHYMLRHSLMSSDHL
DTPMVRSGSLKGRDTVRWKINNNVHKQGFTSLAAANPKDLVPYGLSLRLTRLFTQNLVKL
DTRECEQLRKEVEENLNDVFKHIPGCHKLQQTKFRLQPNSGKRQDHTIVETVLTAPRSAK
PEIIKVMEKHVSHEAFNDLKVSPGYYTVTSDQDAHGMVEFQEAVELVDVRVPLFIREDDD
DEKQLQVEAIDVPTGIAEIGRRLVNITIIKEQASSLITFLQPAYSHSRFDKLAKIPVLRE
IIDNGKSQVTYRTRDLTAKNGRDYIFTEGDLIFQPGETRKEVQVPLLELTEIDTLLHNCQ
LKQFAIDLLHPKYGAKIGRYPQTTVTIADPEVVDGVPSMTGLSQVSQSPKGRLSAPLNPN
AHALSSREIRFSWFPPPGKPLGYKVKYWIQGDPESEAHLIDVKAPSAELSNLYPFCDYEM
QVCAYNAMGEGAYSDIIHCRTLEDVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYE
VSYGPVNEDNVPIGPMKKVLVEDPKKRMVLIENLRESQPYRYMVKARNGAGWGPEREATI
NLATQPKRPMSIPIIPDVPIIDAEGGEDYDSYLMYSADVLRSPAGSKHPSVSDDSGSRWK
YVQLLGEDLDLRRITWRLPPETIPRLSGSSRFXGLLHEEDGDMVTGSLRRSGTPRPQAEH
LLNGRVDFSFPSSGSGTLTRTTNTSYHQLSSHMQQEHRVMGSSSLTRDYSTMLMGHDPVG
VRTVFTAKGAYEPQIWKVVSSPLTYYPGRLLPPIHEDTGRTIPRPRDVGFRSRAKVKGYY
PSTGFRDSIIMTDGSAGICKYI
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
ataacctctgcgtgctgtcccgggcaaagagctgcaccgagtgcatccgagtggacaagg
actgctccttctgcactgatgagaatttcagtatcaacatgtccctgcagaggacccagg
tgtccccccagggcatgttcatgaggctgcgagctggggaggagatgaacttcaacatgg
atgtcttccagcccttggagagccctgtggatctctacatcctcatggacttctcctact
ctctgtctgatgatctggacaacctcaaaagcatgggccaaaacctagcggggttcctgc
aagccctgacctccaattacaccatcggattcggaaagtttgtggacaaagtctcatccc
ctcagacagacatgagacctgagaagctgcgcgagccctggaacaacgccgactccccct
tctccttcaagaacgtcatccgcctgaccaacgacatcaactacttcatccgggagctca
gaaaagagcgcatctctggcaacctggatgcccccgagggcggctttgacgccatcctgc
agacagctgtttgcaaggataagatcggctggaggaatgacagcactcacctgctcgtgt
tctccaccgaatctgcctttcactatgaagctgatggtaccaacgtcctggcagggatcc
tggcgagaaatgatgagcggtgtcacctagacaccaggggcacctacatgtatgacacca
agcaggactatccttcggtgcccaccctggtgcgcctgttgggccaacacaacatcatcc
ccatctttgctgtcaccaaccactcctacagctactatgagaagctgcacaaatatttcc
ccatctctgagatcggggtgctccaggaggactcttccaacatcgtggagctgctccgca
cagcctttgagcgcatccgctccaagatggacatccgggctgacttcgtccccaaagcca
tgaagacagagttcacctcctcgatgtatgaaaagacagaatctggctccttccacatcg
ctcgtggggaagtgggcaagttcaacatgcgtgtgaaggcgcttgagtacatcggcggac
agcacgtctgcagcctccctgagaaagaccggcagggggtnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnngagcgacagcctcaaagtcacagcctctgtcatctgtgatgtgt
gcccttgtgaacagcaacaagacttcaactcgcccaagtgcagcttccatggggactttg
tttgcggacagtgcatctgccacgcgggctggcgaggggacacgtgtgactgctccccag
catcatcccccaataatgaagcctgcatccgtcccggggatgtggagccgtgctcgggcc
ggggcgagtgcctgtgcgggaagtgccagtgctactccgaggacctgacgcagcgcttcg
atggagcgttctgccagtacgacgtcctacagtgcccgcgcacctccggcttcctctgca
atgaccgcggtcgctgctccaagggtgcgtgcatgtgcgagagcggctgggagggtccag
gctgcgaatgtcccacgagcaacgacacctgcatcgacagccgagggggcatttgcaata
accatgggaggtgcgaatgcggcagatgcatctgtgacaaggcttcgctgtacaccagct
ctacctgtgaaatcagctactccctgggcttccaggctgtgtgccagagcatccgcgact
gcgttcgctgccaggcctggggagcaggcaacaggaaagggaactgcagcacgtgccacc
tccagatccagatggtggaagagctgaagaaagaggaggccagcgagtactgctcattcc
aggatgaggaggacgattgcacgtaccactacaccctggagggagatcccaccgtcctcc
ccaacaccaccgtccacgtgcagaagaaaaaagactgcccgccggggagcttcctctggc
tcattccgctgctcatcttcctcatcctgctcctggggctgctgctgctgctctgctgga
agttctgcgcctgctgcaaggcttgcctggccctgcttccctgctgcgcacgaggtcgca
ctgttggcttcaaggaggaccactacatgcttcgccacagcctcatgtcctccgaccacc
tcgacacccccatggtccgcagtgggtccctcaagggtcgggacactgtccgctggaaga
tcaacaacaatgttcacaagcagggcttcacctccctcgctgccgccaaccccaaagatc
tcgttccctatgggctgtctctgaggctgacacggcttttcacgcagaacctggtgaagc
tggacacccgggagtgcgagcagttgcgcaaagaagtggaggagaacctgaacgatgttt
tcaagcacatcccgggctgtcacaagctccagcagaccaagttcaggttacagcccaatt
ctgggaaaaggcaggaccacaccattgtggagacagtgctcaccgcccctcgctcagcta
agccagagatcatcaaagtgatggaaaagcatgtttcccacgaagctttcaatgacctga
aggtttctccgggttattacactgtgacctccgaccaagatgctcacgggatggtggagt
tccaagaggctgtggagctggtggatgtccgtgtcccactcttcatcagggaggatgatg
atgatgagaagcagctgcaggtggaagccattgatgtccccaccggcatcgcagagattg
gacgcaggcttgtcaacatcaccatcatcaaagaacaagccagcagcctcatcaccttct
tgcagccagcctattcccacagccgctttgataaactggccaagatccctgtgctccggg
agatcatagacaatgggaaatcccaagtcacctacaggacccgggatctcaccgccaaga
atggcagggactacatcttcacagagggtgacctgatcttccagcccggggagacccgaa
aggaggtgcaggtccccttgctggagctgaccgaaatagataccctcctgcacaactgcc
agctcaagcagtttgccatcgacctcctccatcccaagtacggtgccaagatcggccgat
acccccagaccacagtgaccatcgccgacccagaggtggtggatggtgtcccctcgatga
ctggcctgagccaggtctcccagtcccccaaaggccgcctgagtgcaccactaaatccca
acgcccatgctctcagctccagggaaatccgcttcagctggtttcctccaccgggaaaac
ctctggggtacaaggtgaaatactggatccaaggggacccagagtcagaagcccacctca
ttgatgtcaaagcaccatcagcagagctgagtaacctctaccccttctgtgattacgaga
tgcaagtctgcgcctacaatgccatgggtgaaggggcttactccgacatcatccactgcc
gcacacttgaggatgtccccagcgagcctggccgcttggctttcaatgtcgtgtcttcca
ctgtgacacagctgagctgggctgagcctgcagaaaccaatggggagatcacagcttacg
aagtcagttatggacccgtcaatgaggacaacgtacccattggcccaatgaagaaggtgc
tggttgaagacccaaagaagcgcatggtgctgatagaaaacctgcgggagtcccagccct
atcgctacatggtgaaggccagaaatggtgctggctggggacctgagagagaagccacca
tcaaccttgctacgcagcccaagcgcccgatgtccatccccatcatccctgacgtcccca
tcattgatgcagagggaggtgaggactatgacagctacctgatgtacagcgcagatgtgc
ttcgctctccagctggcagcaagcatcccagtgtctctgatgattcaggctccaggtgga
aatatgtgcagttgctgggagaagacttggatcttcgccgcatcacctggaggctcccac
ctgaaaccattccccgcctctctggcagcagccgcttcntcggtctcctccatgaggagg
acggcgacatggttactggcagcctgaggaggagtgggaccccccggccccaagcagagc
acttgctgaatggccgggtggacttctccttccccagcagtggtagtggcacgctgacca
ggacaacgaacaccagctatcaccagctgagctcgcacatgcagcaggagcacagggtga
tggggagctcctcgctgacgagagactactccacaatgctgatggggcacgatcccgttg
gggtgaggactgtgttcacagctaagggggcctatgagccacagatctggaaggtcgtgt
cctcaccactgacatattacccggggagactcctccctcccatccatgaagatactggga
ggacaatcccacggccccgggatgtgggtttcaggagcagggcaaaggtgaagggttact
accccagcactggctttcgggactctataatcatgactgatgggtctgcggggatttgca
agtacatag
DBGET
integrated database retrieval system
