Gavia stellata (red-throated loon): 104258395
Help
Entry
104258395 CDS
T08384
Name
(RefSeq) LOW QUALITY PROTEIN: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4-like
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gste04040
]
104258395
Ion channels [BR:
gste04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
104258395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
104258395
NCBI-ProteinID:
XP_009811796
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
PEPQQQPPRACSSTSIKVEGGGGCDQITPDEEQRLGQAGFMQRQFGAMLQPGVNKFSLRM
FGSQKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTT
PWIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFVVDFISSIPVD
YIFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLAS
AVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSLNRMVNDSWGKQYSYALFKAM
SHMLCIGYGQQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQ
VEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILGELSEPLREEIINFNCRKLVASM
PLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLA
DGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDR
IGKKNSILLHKVQHDLNSGVFNYQENEIIQQIVQHDREMAHCAHNVQAAAAAXXXXXXVI
WTPLIQAPLQAAAATTSVAIALTHHPRLPTAIFRPPVSVLGSLGQQSNQTPRQLKRLQSL
IPSTGPSAVGSPSSTPSQLHTPGAETPSSSSFHIQQLAGFSAAAGLGQFQVGSPPGGSSQ
PGLSSASSVGLSQFQHAPSGSPLGTAQPMQQQQQQQQPPALSSSGFGHFQQATTSSPSTS
LTQLSSNSPPSLLNQFQPNTRPLQGGQLQQLSGSGTLGGMNHFQPPPSNSPSSSLSQLAQ
ASGGPSSGLCQTHPSALGSLTGTIAQLHQERPPFASMSPLQQSGVASPCYTPSGLSPPSQ
SPVATRTFQCGPSGASGSHGSLLLPQTASPPLQILQSKSTAPVPPGRLNQDIKLISASQP
SLPQELAQALSQSSPHSSRESVSSFSPFPGGGTGLLGKPCSSIPGRVTLPRQMSSGSLPH
PLVFGASAAGAASLTAGGRKESIVLTGDLEPVRSKLPSNL
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
ccggagccccagcagcagcccccccgggcttgctcctctacctccatcaaagtggaagga
ggtggagggtgcgaccagatcaccccagatgaggagcagaggctgggccaagccggtttc
atgcagaggcagttcggggccatgctccagccaggggtcaacaaattctccttgaggatg
tttggcagccagaaggccgtggagagggagcaggaaagggttaagtctgccgggttctgg
atcatccatccctacagcgacttcaggttttattgggatttgaccatgctgctcctgatg
gtagggaacctgatcatcatccctgtgggcatcactttcttcaaggatgaaaacactacc
ccatggattgtcttcaacgtggtttcggacacgttcttcctcatcgaccttgtcctcaac
ttccgaacaggcattgtggtggaggacaacacagagatcatcctcgacccacagaggatc
aagatgaagtacctgaagagctggtttgtggtggattttatctcctccatccccgtggac
tatatcttcctgattgttgaaacccgcattgattctgaggtgtacaagacagcccgggct
ctgcgcatcgtgcgcttcactaagatcctcagcctcctgcggcttctgcggctctcccgg
ctcatccgctatattcatcagtgggaggagatcttccacatgacctacgatctggccagt
gcagtggtgcggattgtgaacctgattgggatgatgctgctgctgtgtcactgggatggc
tgcctccagttccttgtgcctatgctgcaggacttccccgacgattgctgggtatccctc
aaccgcatggtgaatgactcctgggggaagcagtattcctatgcgctgttcaaggcaatg
agtcacatgctctgcattgggtacgggcagcaggcgcccgttggcatgtcagatgtgtgg
ctcactatgctgagcatgattgtcggtgccacctgctatgccatgttcatcggccatgcc
acagccctaatccagtctctggactcctcacggcgtcagtaccaggagaagtacaaacaa
gtggagcagtatatgtccttccacaagctccctgcagacatgcggcagcgcatccatgat
tactatgagcaccgctaccaggggaagatgtttgatgaggagagcatcctgggagagctg
agtgagcccctccgagaggaaatcataaacttcaactgccggaagctcgttgcctccatg
cccctctttgccaacgcagatcccaactttgtgacatccatgttgaccaagttgcggttc
gaggtgtttcagccaggggattacatcatccgggagggcaccattggcaagaagatgtac
ttcatccagcacggggtggtgagcgtcctcaccaaaggcaacaaggagacgaagctggca
gatggctcctacttcggagaaatttgcctgttgacccgtggccggcgcacagccagtgtg
cgagctgatacctactgccggctctactccctctcagtggacaacttcaatgaggtgctg
gaagagtatcccatgatgcggcgagcttttgaaactgtggctcttgacaggctggacaga
attggcaagaaaaattccattctgctgcataaagtccagcatgacctcaattcgggtgtt
ttcaactaccaggagaatgagatcatccagcagattgtgcagcacgacagagagatggca
cactgtgctcacaatgtccaggctgccgctgctgctnnnnnnnnnnnnnnnnctgtcatc
tggactccactgatccaggcacccctgcaagctgcagcagccaccacttctgtcgctata
gctctgacccaccacccacgcctcccgacagccatcttccgtcctccggtgtccgtcttg
ggttctttgggacagcaatccaaccagactccaagacagctgaagaggcttcagtctcta
atcccgtcgactgggccttctgccgttggctctccctccagtactccatcccagctgcat
acaccaggagcggaaaccccttcgtcctcttccttccacatccagcagctcgcaggattc
tcagctgctgccggcttaggccagttccaggtgggatcccctccaggtggctcaagccag
ccgggtttgagcagcgcatcctcagtgggactgagccagttccaacacgctccttctgga
tcacccttaggtacagctcagcccatgcagcagcaacagcagcagcagcagccgccagcc
ctttccagcagtggatttgggcacttccagcaagccacaactagctccccatcaacgtca
ctcacccagctctcctcaaactcaccccccagtcttctcaaccagttccagcccaacaca
agaccactgcaggggggacagttacagcagctgtcgggcagtgggactttggggggaatg
aatcacttccaaccccctccttccaactctccatcctccagcctaagccagctggcacag
gcctctggtgggccgtcctcaggcctgtgccaaacgcatccaagtgcattaggatcttta
actggaacgatagcccagctccaccaagagcggccaccttttgcctccatgtctccacta
caacagtctggtgtcgcctctccctgttataccccttctggccttagccctcctagtcag
agcccagtggcaacaagaacttttcaatgtggcccttccggggcctcaggctctcacgga
tctctgctcctgcctcagaccgccagcccacctctgcagatcctgcagtccaagagcacg
gcacctgtgccaccgggacgtctgaaccaggacatcaagttgatttctgcttcccagcca
tctttgccccaagagctggctcaggcactgagccaaagttctcctcattcctctagagaa
tctgtttccagcttctctccttttcctggtggagggactggacttcttgggaagccttgt
agctcaattcctgggcgtgtgactttaccacgtcagatgtcctcaggttctttaccacat
ccgctggtgtttggggccagcgctgcaggcgccgcatctctgactgctggtgggcggaaa
gaatccatagtgctcacaggggatctggaacctgtcaggtccaaactgccctccaatttg
tga
DBGET
integrated database retrieval system
