Gavia stellata (red-throated loon): 104258521
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Entry
104258521 CDS
T08384
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-1-like
KO
K05637
laminin, alpha 1/2
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04510
Focal adhesion
gste04512
ECM-receptor interaction
gste04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104258521
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104258521
09142 Cell motility
04820 Cytoskeleton in muscle cells
104258521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_G_1
Laminin_B
Laminin_G_2
Laminin_N
Laminin_I
Laminin_II
Hepar_II_III
Motif
Other DBs
NCBI-GeneID:
104258521
NCBI-ProteinID:
XP_009811950
LinkDB
All DBs
Position
Unknown
AA seq
2760 aa
AA seq
DB search
MFCKLVEHVPGRPLRNAQCRVCDHHSANPKEQHPISSAIDGTNNWWQSPSIQNGRQYHWV
TITLDLRQVFQVAYVIIKAANAPRPGNWILERSIDGTEFRPWQYYAISDTECLTRYNITP
RIGPPTYKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSQKLLEFTSARYIRLR
LQRIRTLNADLMTLSHNDPKELDPIVTRRYYYSIKDISVGGMCICYGHARSCPLDEITKK
LQCQCEHNTCGESCNKCCPGYHQKPWRPGTISAGNKCEKCNCHNKAEDCYYNQSIADQKR
SMDIHGQYIGGGVCLNCTQHTTGINCEMCADGYFRPRKVSPYEDHPCYPCGCDPFGALTS
DCVKDEHHSDSQHGTWPGQCQCREGYTGEKCDSCAFGYRGYPNCLRCNCSLIGSVNEDPC
TEPCLCKENVEGENCDLCKPGFYNLQERNPQGCTECFCFGVSDVCDSLAWPVSQISDMTG
WLVTDLYNARSVQPQQSQFDGPHQISINNTEAVKVLEHTYYWSAPETYLGNKLTAFGGDL
KYTVSYDIPMESVDSDIVSSVDVIIQGNGQILSTRAAGLSLQPYEEYSNAVRFVSENFID
FNTKKAIDRERLMTVLVNVTHLLIRANYNIAKKAVYRLDSVTLDTASANVIDLSSAPDVE
FCECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCNGHATECDIHGVCFACQHNTTGP
FCDQCLPGFYGSPSQGTSEDCQPCACPLSSAANNFSPTCQLSEGGGIVCDRCLPGYTGSR
CERCANGYYGNPLMPGQSCAPCECNGNVNPQEDGHCDTFTGQCLKCLGNTAGHHCEKCAN
GYYGDAVTEKSCRACACHVNGSLSSTCHHKTGFCHCKSNVVGERCDKCLNGYYGLLTGLG
CIPCNCSQFGSVSEDCNHQGQCHCVPGVAGEKCDRCAHGFHAFQDGGCTPCDCAHTQNNC
NADSGQCICPPHTQGPKCELCEENHWGLSPKLGCKACNCSDTGSTNLQCDVLTGQCQCKV
EFGGQDCSRCALGYRDYPDCVACDCDLSGTKAEMCDDTEGLCGCEEETGICTCKENVFGL
QCSECKPGTFALSANNALGCTPCFCFGMSTFCLELEDHVRIPITITPDQSVLRVVAPSNL
TGTVEGVFLQFPDILLDAAIVRKYLNTETFYWRLPEQFQGDQLTAYGGKLRYTVAFYALD
GFGTSNFEPQILMKGGHTSKLVIYVDIPSPENGVRTDKEVEMKEDSWKYFNSVSDKPVLR
SDFMSVLSNVEYILIKAAYGQGLQQSRIANISMEIAVKFEEMHLGRARAHLVEQCRCPAG
YAGLSCQSCAPGYYRGKHTELGVKEAHTLIAPCVPCQCNNHSEICDPETGKCLNCRDNTV
GDYCSACAPGYYGKVIGSVNDCSLCACPRANPVSFSPTCVLKGVQDYHCDACLPGYEGQY
CERCSLGYYGDPQLTGGRCHPCRCNPSGSVHVNCDRATGQCLCKQGMTGQLCEECEPRHL
LVEDECVSCDDNCTGILLNSLDNLSKAILLVNLTGVAHVPYGILSELENATKHLKGSIVP
REDSAHSLATTKESLLSLSGGIDQLHEESSRFLKKAWQLNTMTQETRNKSQELPGFIDTV
HTTIKVLAEVAMSLNETLGLDLPLSNATSQSLQDDISSLLDALRKKDFVQQHHNATSVLK
AAEKLLIRVRKEYLKPQQELAELKKDVSQLLSKHNSRLQDAQDLVNTALANINETNRLFP
LISSNLAELNDKKLSVKEGEEVSTMLIKEGKVLVNVAAAVVQDVKNSTSNLEVHQDGLVL
WSTKLRHHVDELVMQMSVRGVLDLVYRAEDHAAQFQRLADALESGLSRVRNLTLNTTAAV
YTHSVIKSVIERTESLADDTSRVVNGPLDLPEESLSLLGKETLLLSSKFQNEAKNLKKKS
DGLLFGLNGLNKKVEKIQESTNKIVNQLNDSLRALPNDTRKYMLEVKELAVSANTSAVVG
LRHFGDFSQKLLNTSSTLSRVNDTLRKTSELITDSSKTAITAEKQVKEVEAQASLLLDRL
KPLKMLEENLNRNLSEIKELISQARKQAASIKVAVSADRDCIRAYQPQISSTNYNTLTLN
VKTGEPDNLLFYLGSNGKTDFLAVEMRRGKVALLWDLGSGSTRVEYPDFQIDNNKWHRIH
ATRFGKTGTLSIEEMNSNQKPSSKSATSPGTASILDVNKSTLMFIGGLGGQIKKSPAVKV
THFKGCMGEASLNGKSIGLWNYVEREGKCNGCFGSPQDEDTSFHFDGSGYSVVEKALRST
VTQIIIFFSTFSPNGLLLYLSSNGTRDFLSLELVDGKVRLTVDLGSGPLALTTENRYNNG
TWYKISFSRNKKQGILAVMDAYNLNYKETKQGXXXXXXXXXXXLTRSDKDPIFIGGLPRL
RTVRKGLNSRMYVGCIKNLEISRSTFDLLRNSYGVRKGCVLEPIRSVNILNNGYIELVPK
SLSPESELMATFATKNSSGIILAGLSRGLEKRRRRQALLPFFSIMLIDGQLAVHVNAGDR
VSTRKVILQSANGTYGDGQEHSVILIRNKRIITVQVDESNPTEXMSPVNISNFYAGGIPA
GEGILGLKLAGSFHGCISNLIFNKELLYFTTSMKYEHVDMDSCFLSEKPKPAIQPEDIEI
QPELQALPVPLRPLTDIKKVVCAKDELPDHVQGAHQFGLAKGSHLTLLFNQSTVRKKLSV
QLNLRTFASSGLIYYMAHQNQVDYAALQLHGGQLYFSFDLGKGKAVAFHPAVISDGKWHT
NT seq
8280 nt
NT seq
+upstream
nt +downstream
nt
atgttctgcaaactggtggagcacgtcccgggacggcccttgcgcaacgcgcagtgccgc
gtctgtgaccatcacagtgccaatcccaaagagcagcacccaatttccagtgcaattgat
gggaccaataactggtggcaaagtcccagcattcagaatgggaggcaataccactgggtc
actatcaccttggatttaaggcaggtctttcaagttgcatatgtcatcatcaaagctgct
aatgctccacgacccggaaactggattttggaacgctccatagatggcacagagttcaga
ccatggcagtactatgcaattagcgatactgaatgtttaactcgttataatattacgcca
agaattgggccaccaacttacaagagagatgatgaagtgatctgcacctcctattattcc
agactagttcccctggaacatggagagattcacacgtcactgatcaacggtaggcctagt
gctgatgatccttcacaaaagcttttggagtttacttctgcacgatacatccgcctacga
ctgcagcgtattagaacccttaatgctgacctcatgactctcagccataatgaccctaaa
gaactagaccctattgttaccagaaggtactactattcaataaaggacatctctgttggt
ggcatgtgtatttgttatggccatgctcgaagctgccctctggatgaaatcacaaagaaa
ttgcagtgccagtgtgaacacaacacatgcggagagagctgtaacaagtgctgtcctggc
taccaccagaaaccgtggagaccaggaaccatttctgctgggaacaaatgtgagaagtgc
aactgtcataacaaagcagaagattgttattacaatcagagtattgcagatcagaaaagg
agcatggatattcatggccagtatataggaggtggcgtgtgtttaaactgtactcaacat
actactgggatcaactgtgaaatgtgtgctgatggatattttagaccacgcaaagtttct
ccctatgaggatcacccctgctatccctgtggctgcgacccgtttggtgctctgacttct
gactgtgttaaagatgagcaccattctgactcacagcatgggacttggccaggtcagtgt
caatgcagagaaggttacacaggagaaaaatgtgatagttgtgcatttgggtatcggggc
tatccaaactgcctgcgttgtaactgtagcttgattggtagcgttaatgaagatccgtgc
acagaaccttgtctttgcaaagaaaatgtagaaggtgaaaactgtgatctctgtaaacca
ggattctacaatttgcaagaaagaaatcctcagggctgcacagagtgtttctgctttggg
gtttctgatgtctgtgacagcctagcatggcccgtcagtcagatatcagacatgactgga
tggcttgttactgatctgtataatgcaaggagtgtgcaacctcagcaaagccaatttgat
ggaccccatcaaataagtattaacaacactgaggctgtgaaagtgctggaacatacttac
tactggtcagcacctgagacatatctaggaaataaactcacagcttttggtggagacttg
aagtatacagtatcttatgacattccaatggagagtgtggacagtgatatagtatctagt
gtggacgtcatcatacagggtaatgggcaaattttgagtacaagagcagcgggcttgtct
ttacagccatatgaggagtactctaatgctgtgagatttgtatcggagaatttcatagac
ttcaatacaaaaaaagctatagaccgggaaaggttgatgactgttctggtaaacgtgacc
catcttctgatcagggccaactacaacattgccaaaaaagctgtgtacaggctggactct
gtgaccctggatactgcaagtgcaaatgttatagatctttcttcagcaccagatgtggaa
ttctgtgaatgtcctcaaggttacacaggaatatcctgtgagtcctgtctccctgggtac
taccgtgtggatggaatactctttggaggtatttgtcaaccctgcaaatgcaatgggcat
gcaaccgagtgtgatattcatggtgtttgctttgcttgtcaacacaacacaacaggacct
ttctgtgaccagtgcttgcctggcttctatggaagtccgtcccaaggaacttctgaggac
tgccagccctgtgcatgtcctctgagttctgctgcaaacaatttcagtcctacttgccag
ctgagtgaaggaggtggaatcgtctgtgacagatgtcttccaggctatactggttctcgg
tgtgaaaggtgtgctaatggttactatggaaatccactcatgcctggacaatcgtgtgct
ccttgtgaatgcaatggcaatgtaaaccctcaagaagatggccactgtgataccttcaca
ggacaatgcctgaaatgtctggggaacacagcaggtcaccactgtgaaaagtgtgctaat
gggtattatggggatgcagtgactgagaaaagctgtcgtgcctgtgcgtgccatgtgaat
ggttccctttcgagtacttgtcatcataagacaggcttctgtcactgcaaatcaaatgtg
gtcggagaaagatgtgataagtgcttgaatggttattatggcctgcttactgggcttggc
tgcattccctgcaactgcagtcagtttggctcagtctctgaggactgcaatcatcagggg
cagtgtcactgtgtaccaggagtggctggagaaaagtgtgatcgttgtgctcatggcttt
catgcgttccaggatggtggctgcacaccctgtgactgtgctcatactcagaacaactgt
aacgctgattctggccaatgcatttgtccccctcacactcagggaccaaaatgtgaactc
tgtgaagaaaatcactggggactgtctcctaaacttggctgcaaggcttgcaactgtagt
gacactggttcaaccaatctccagtgtgatgtattgacaggtcagtgtcagtgtaaagtt
gaatttggaggacaagactgttccaggtgtgcattaggctacagggactacccggactgt
gttgcctgtgactgtgacttgagtggaaccaaagcggagatgtgtgatgacactgaaggg
ctttgtggttgtgaagaagaaactggcatctgtacctgcaaggaaaatgtatttggtcta
caatgcagtgagtgtaaacctggaactttcgctctgtctgctaacaatgcactaggttgt
actccctgcttctgtttcgggatgtccacattttgtttggaactagaagaccacgtgaga
attcctataaccataactccagatcagtccgttctgcgtgtagtagctccaagtaacctg
actggaacagtggaaggagtatttttgcaatttcctgatattttactggatgctgccata
gtcagaaaatacttaaatacagaaacattttactggaggttgccagaacagtttcaggga
gaccagctcacggcctatggagggaagctaagatatactgttgctttttatgctttggat
ggctttggaacctcaaattttgagccacagattctaatgaaaggaggtcacaccagcaag
ttggtcatctatgtagacatcccttctccagaaaatggagtaagaactgacaaggaagta
gaaatgaaggaggattcttggaagtattttaactctgtgtctgacaagcctgtcttacgt
tctgacttcatgtctgttctaagcaatgttgaatacatccttatcaaggcagcttatggc
caaggattacagcaaagcagaattgcaaatatctcaatggaaattgcagtgaagtttgaa
gaaatgcatctaggcagagctagagctcatcttgtagagcaatgtagatgtcctgctggt
tatgctggattgtcctgtcagagctgtgctccaggatactacaggggaaagcatacagaa
ctcggtgtaaaagaggctcacactctgatagcaccttgtgtgccatgtcagtgcaacaac
cacagtgaaatctgtgatcctgaaactggaaagtgcttgaactgcagagataacacagtt
ggtgactactgcagtgcttgtgccccaggctactatgggaaagtaattggatctgtcaac
gactgctctctttgtgcctgtcccagagccaaccctgttagctttagtcccacttgtgtc
ctgaaaggcgttcaggattaccactgtgatgcttgtctcccaggatatgaaggacagtac
tgtgaaaggtgctcccttggctattatggtgaccctcagcttactggtggcagatgccat
ccgtgtcggtgcaatccaagcggctctgttcatgttaattgtgatcgtgcaactggccag
tgcctctgtaagcaaggcatgacaggacagctctgtgaggagtgtgaaccgagacatctt
cttgtggaagatgagtgtgtttcttgtgatgacaactgcacaggaattttgttaaacagt
ttggataatctcagcaaggccatacttttagtgaacctcactggtgttgcccatgtgccc
tatgggatattgtcagagttggagaacgcaacaaaacatctgaaggggtctatagttcct
agagaagattcagctcactcattagctacaacaaaagaaagtcttctgagtttatcagga
ggaattgatcagctgcatgaagagtcgtctagatttttgaaaaaagcttggcagcttaac
acaatgactcaggaaaccaggaataaaagtcaagaactgcctggatttattgacacagta
catacaaccatcaaagtacttgctgaagttgctatgtcactaaatgaaacactgggcctg
gatctcccgctgtcaaatgctacatctcagagcctgcaggatgatatatcttcccttttg
gatgcattgcgcaaaaaagattttgttcaacagcatcataatgctaccagtgtcctaaaa
gctgcagaaaagttgttgatccgggttcggaaagaatatcttaagccccagcaggagctt
gctgagctaaaaaaggatgtaagccagctcttatcaaagcacaacagcagactgcaagat
gcccaggatctggtgaatacggcgcttgctaacatcaatgagaccaatcgcttgtttcct
cttatctctagcaacctggcagagttaaatgacaaaaagctgagtgtaaaggaaggtgaa
gaagtctcaaccatgctcattaaagaagggaaggtcctagtgaatgttgctgctgctgtt
gtccaagatgtaaagaactctacatctaacctggaggtccaccaggatgggttagtccta
tggagcaccaaactgcgacaccacgtggatgaactggtgatgcagatgtctgtgagagga
gtgcttgacctggtatacagagctgaggaccatgccgcccagttccaaagacttgcagat
gcactagagagtggcctctctagagtaagaaatttgactctgaacacaactgcagctgtc
tacacccactccgtcattaaaagtgtgattgaaagaacagagagtttggcagatgataca
tctagagttgtgaatggccccttggatttaccagaggagtctcttagtcttcttggaaaa
gaaactctactgcttagctccaaatttcagaatgaagctaaaaatctgaagaaaaaaagt
gatggccttttatttggattgaatggattgaacaaaaaggtagaaaagattcaggaaagt
actaataaaattgtcaaccagcttaatgattccctcagagcattgcctaatgatacaagg
aaatacatgcttgaggtgaaagagctggctgtgtctgcaaacaccagtgctgtggtgggt
ttaaggcactttggggatttcagtcaaaagctgctgaatacttcttctacattgtcccga
gttaatgacacattgaggaaaactagtgaacttataactgattcatcaaaaactgcgatc
acagctgaaaaacaagttaaagaagtcgaagcacaagcaagtcttttattggataggctg
aaacctttgaaaatgttagaggagaacctgaacagaaacctgtctgaaattaaagagctc
atcagccaggcccgcaagcaggcagcatctattaaagttgcagtatcagcagacagagat
tgcattcgtgcttaccaaccccaaatttcatctacgaattacaacaccttaacactcaat
gtgaaaactggtgaaccagataacctccttttctacctgggtagcaatggaaagacagac
ttccttgcagtggagatgcgacgtggtaaggtagctcttctttgggatttgggctctgga
tcaacaagagtggaataccctgattttcaaattgacaacaacaaatggcacagaatacat
gcaaccaggtttggaaaaacaggtacactcagcatagaggaaatgaactccaatcagaag
ccttcatctaaatctgcaacctctccagggacagccagcatactggatgttaacaaatca
accctaatgtttatcggaggacttggagggcaaatcaagaaatcacctgccgttaaggtg
acccattttaaagggtgcatgggagaggcatccctgaatggcaaatctatcggtctttgg
aactacgtggaaagagagggcaagtgcaatggctgttttggaagcccacaggatgaggac
acttcattccattttgatggcagtggatactcagttgtggagaaggcactccgctcaaca
gtgactcagataataatatttttcagtaccttttcacctaatgggctgcttctgtatctt
tcttcaaatggcactagagatttcttgtcccttgagcttgttgatggcaaagtgagactg
actgttgatctaggttcaggacctcttgctcttacaacagaaaatcgttacaacaatgga
acatggtataaaatttcattcagtcggaacaagaaacaaggaattttggcagtcatggat
gcgtataaccttaattataaagaaaccaagcaaggagnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnncctgacccgctctgataaggacccaatcttcattggtgggctgccaagattg
aggactgtgaggaaaggccttaatagtagaatgtatgtgggatgcatcaagaatctggaa
atatcccgttcaacctttgacttgcttagaaattcatacggagtaagaaaaggctgtgta
ttggagcccattcgtagtgtgaacatcttgaacaatggatatattgagttggtacctaag
tccttaagcccagaatcagaactgatggcaacttttgctacaaagaacagcagtggcatc
atccttgctggactcagcaggggactggaaaagcgacgacgtagacaagcacttttgccc
ttcttttccatcatgctgattgatggtcaacttgcagtgcatgttaatgctggagataga
gtaagtactagaaaagtaattcttcagtctgctaatggaacgtacggtgatggacaagaa
cactctgtcatcctaatacggaataagaggatcataactgtacaggtggatgaaagtaac
cctacagaantaatgagccccgtgaatatttccaacttctacgctggtggcattccagca
ggagagggcatcttagggctaaaactggctggctcctttcatggctgtatcagcaatctt
atttttaacaaggagcttttgtatttcaccacttccatgaagtatgaacatgtggatatg
gacagctgctttttgtcagagaagcctaaaccagccatacagccagaagacattgagatt
caacctgaacttcaggctttaccagttcccctgaggcctcttacagatataaaaaaagta
gtttgtgcaaaagatgagctacctgatcatgttcaaggtgcccatcagtttggacttgcc
aaaggcagccacttgacactgctcttcaatcagtctactgtcaggaagaaactttctgtc
cagctgaatctcagaacctttgcctccagtggcctgatttactacatggctcaccagaac
caggttgattatgcagccctacagcttcacgggggacagctctatttctcatttgatcta
ggcaaaggaaaagcagtagcttttcaccctgctgttatcagtgatggaaaatggcatacg
DBGET
integrated database retrieval system
