Gavia stellata (red-throated loon): 104258704
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Entry
104258704 CDS
T08384
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104258704 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104258704 (HBS1L)
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104258704 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
104258704
NCBI-ProteinID:
XP_009812189
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
KTRDSQSARMESEIVPKVTKMTVSGKKQSMGFEVPCVIAEENGHANTPQKGLLTEDASVA
SGVLEAVSKSTLSPQVVQVSEEQNTVPTPVKKSSKTKPQIDVKAELEKRQGGKQLLNLVV
IGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVT
MDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQADVAILVVDASRGEFEAGFETGGQ
TREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITSKLGQFLKQAGFKESDVAYIPTS
GLGGENLVTRGQSSDLTQWYKGKCLLEQIDSFKPPQRSVDKPFRLCVADVFKDQGSGFCV
TGKIEAGYIQVGERLLAMPPNETCTAKGITLHDEPVDWAAAGDHVSLTLTGMDIIKINVG
CVFCDPKEPIKVCTRFRARVLIFNIEVPITKGFPVLLHYQTISEPATIRRLLSVLHKSTG
EVTKKKPKFLTKGQNALIELQTQRPVALELYKDFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
1622 nt
NT seq
+upstream
nt +downstream
nt
gaaaaacgagggattcccagtcagccagaatggaatctgaaattgtgccaaaagttacca
aaatgacagtatctggaaagaaacagtctatgggatttgaagttccatgtgtgattgctg
aagaaaatggccatgctaacacgcctcagaagggactgttaactgaagacgccagtgtag
cttctggggtacttgaggcagtctcaaaatctactctttcacctcaagtagtgcaggttt
cagaagagcagaatacggtgcctactccagtaaaaaagtcaagcaagacaaaaccacaaa
tagatgtgaaagcagagttggagaagagacaaggaggaaagcaactgcttaatttggtag
taataggacatgttgatgcaggtaaaagtactttaatgggtcatctgctctaccttttgg
gaaatgtgaacaaaagaactatgcacaaatatgaacaggaatctaagaaggctggcaaag
cttcgtttgcctatgcatgggtcttggatgaaactggtgaagaaagagaaaggggagtga
caatggatgtgggtatgaccaaattcgagacaaagactaaagtaattacactgatggatg
ctccaggccacaaagacttcattccaaatatgatcacaggagctgcacaggctgatgtgg
ctattttggttgtggatgctagcagaggagagtttgaagcagggtttgagacgggtggac
aaactcgagaacatggattattagtgcgctctcttggagtgacacagctagctgttgcag
tcaataaaatggaccaggtcaattggcaacaggaaagatttcaggaaattacaagtaagc
tcggccaatttcttaaacaagctggctttaaggaatcagatgtggcttatatcccaacga
gtggccttggtggtgaaaatctggtcacaaggggtcagtcaagtgacctcacacagtggt
ataaaggaaagtgtttgttagagcaaatcgattctttcaagccaccacagagatcagtgg
ataaaccatttaggttgtgtgttgctgatgtttttaaagaccaaggatcaggattttgtg
tcactggtaaaatagaagcaggctatattcaagttggagaacgacttctggcaatgcctc
ccaatgaaacttgcactgcaaaaggaatcacactgcatgatgaaccagttgattgggctg
cagcaggagatcacgttagtctcactttgaccggcatggatatcatcaaaatcaatgttg
gctgtgtattttgtgatcccaaggaacccattaaagtttgcactcgtttcagagcccgag
ttctcattttcaatattgaggttccaattactaaaggatttcctgtgcttttacactatc
aaaccataagtgaacctgctactattagaagactgttgagtgtcctgcacaaaagcactg
gtgaagtgacaaagaaaaaacctaaattcttgactaaagggcagaacgctctaatagaac
tacaaactcaaagacctgttgctctagagttgtataaagattttaaagagctcgggaggt
ttatgttacgctacagtggttccactattgctgcaggagttgtcacagagattaaagaat
ga
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