Gavia stellata (red-throated loon): 104258826
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Entry
104258826 CDS
T08384
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104258826 (TRIM71)
04121 Ubiquitin system [BR:
gste04121
]
104258826 (TRIM71)
Enzymes [BR:
gste01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104258826 (TRIM71)
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104258826 (TRIM71)
Ubiquitin system [BR:
gste04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104258826 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
TEN_NHL
Vgb_lyase
YlbD_coat
PspA_IM30
Motif
Other DBs
NCBI-GeneID:
104258826
NCBI-ProteinID:
XP_009812322
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MGRHVGHSFIYLQDALQDSRTLTIQLLSDAQQGRQAIQLSIEQAQAVAEQVEMKAKVVQS
EVKAVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDNTISAVQHVL
EECRTMDILLARDRMLAQVQELKNVRGLLQPQEDDRIMFTPPDQALYMAIKSMGFVSSGA
FAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDMISAVVMGPDGNLFGADVSD
QQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVVVKSGRSYIGIGLPGLSFGSEGDS
DGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACD
ISRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNH
RVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSAR
FLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGTQGSGFGQMD
RPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggacgacatgtgggtcacagctttatctacctccaagatgccctccaggactccagg
actctcactattcagcttctgtcagatgctcagcaaggacgacaggctattcaactgagt
attgaacaggcccaggctgtggcagagcaggttgagatgaaagcgaaggtggtacagtct
gaagtcaaagcagtgactactagacataagaaggccttagaagagcgggagtgtgagctg
ctctggaaggtggaaaagattcgtcaagtcaaagctaagtcactctacttgcaagttgaa
aagttacgtcagaacctaaataagctggacaacaccatcagtgctgttcagcatgtcctg
gaggagtgtcgtaccatggatattcttctggctcgggaccgcatgctggctcaggtgcag
gagctgaaaaatgtgagaggccttctccagccacaggaagatgacaggatcatgttcact
ccccctgaccaggcattgtatatggccattaaatcaatgggctttgtcagcagtggggct
tttgctcctctgaccaaagccacgggggaaggcctcaagcgtgcactgcagggcaaagtg
gcctctttcacagtgatcggctatgaccatgatggtgagcctcgcctttcaggaggtgac
atgatctctgcagtagtgatgggtccagatggaaacctttttggggcagatgtcagtgat
cagcagaacgggacctacctggtcagctaccgtccacagctagagggagagcatctggta
tccgtgatgatgtgcaaccaacacattgagaacagccccttcaaagttgtggtgaaatct
gggcgcagctatataggcattgggctgccggggctctcctttggcagtgagggagacagc
gatggcaaactctgccgcccctggggagttagtgtagacaaagaaggctacatcattgtt
gctgaccgcagtaataaccgcatccaggtgttcaaaccatgcgggaccttccatcacaag
tttggcacactgggctcccggccaggccagttcgatcgtcctgccggtgtggcctgtgac
atctcgcgtaggattgttgtggctgacaaggacaatcatcgcatccagatattcacattt
gaggggcagttcattctgaagtttggggagaaaggaacaaagaacgggcaattcaattac
ccatgggatgtggctgtcaacgcagagggcaagatcctggtctctgacacaaggaaccat
cgcgttcagctgttcgggcccgacggtgtgtttcttaacaagtatggcttcgaaggggca
ctctggaagcactttgattcccccagaggtgtgactttcaatcatgagggccacttggta
gtgacagacttcaacaaccatcgccttctggtcatccatccagattgccagtcagcacgc
ttcctgggctcggagggcactgggaacggccagttcctgcgcccgcagggggtggcggtg
gatcaagaggggcgcatcatcgtggcggattccaggaaccaccgggtgcagatattcgag
tcaaatggtagctttttatgcaagttcggcactcagggaagcggctttggtcagatggac
cgtccttcaggtatagccgtcacccctgatggcatgattgttgttgtcgactttggaaac
aatcgaattctcgtcttctaa
DBGET
integrated database retrieval system
