Gavia stellata (red-throated loon): 104258944
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Entry
104258944 CDS
T08384
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 40 homolog A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104258944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gste03041
]
104258944
Spliceosome [BR:
gste03041
]
Complex A
U1 snRNP components
U1 related factors
104258944
Complex B
104258944
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
104258944
NCBI-ProteinID:
XP_009812487
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MDAQVGVTPPGTQSSVLFRPQTTHPVVCAAQQTATTNSSVNEEHSKQKSTWTEHKSPDGR
TYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKEL
EDLEAMIKAEENSTKPEESTPTTSTPAAAAEATNTTTTATTAAETAAAVTTTTATSAATA
APEAESAAASSVVENESTGTAAAEEQGQASSAPAVQEQSGETAANAADDSSKQEASADGA
SKKEDDDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAK
LSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEM
EVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYCTTWSEA
QQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRES
FQLFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPVFSSGSTALDLFKFYVEDLK
ARYHDEKKIIKDILKVRGEDAPLCGFSFNAKYIIEVNSLVLGDGISHCVNVMCVISTEVR
VSDLPDAKEAIFLQDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKLAFNSLLEKAEA
REREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEPAFEDITLESERK
RIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSETEDDDSHSKKKRQRSES
RSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDLEREKDKKERERESEKDRARQ
RSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcaagtaggtgtaacacctcctggaactcagagctctgttttgtttcgccct
cagacaacacatcctgtagtttgtgcagcccagcaaactgccacaaccaacagttctgtt
aatgaagagcactctaaacagaaatctacatggacagaacacaaatcacctgacggaaga
acatattactataatactgaaacaaagcagtctacgtgggaaaagccagatgatctcaaa
acacctgctgagcaattgttgtctaagtgtccctggaaagagtataaatctgattctgga
aagccctactattataattcccaaacaaaggaatcacgctgggcgaaacccaaagagctt
gaggatcttgaagcaatgattaaagctgaagaaaacagcacaaagcctgaagaatcaact
ccaacgacatctactccagctgctgcagcagaagcaacaaacacaaccaccacagccaca
actgctgctgaaactgctgcagctgttactaccaccactgctacttctgcagcaactgca
gcccccgaagcagaatctgctgcagcttcttctgtggtagaaaatgagagtactggcaca
gccgcagctgaggaacagggacaagcatcttctgcacctgctgtgcaggaacagagtgga
gaaactgcagctaatgcagcagacgactcttccaagcaggaggcttcagcagatggtgct
tcaaagaaagaggacgacgatgcccaaccagttaagaaaacctatacatggaataccaag
gaagaagcaaagcaagcatttaaagaactgttaaaagaaaagcgagtaccatccaatgct
tcttgggagcaagctatgaaaatgatcattaatgatcctagatacagtgctttggcaaaa
ctaagtgaaaaaaagcaagcctttaatgcttacaaagttcaaacagaaaaagaagagaaa
gaagaagcaagatcaaaatacaaagaagctaaagaatccttccagcgttttcttgaaaac
catgaaaagatgacatccacaacaagatacaaaaaagctgaacaaatgtttggggagatg
gaagtctggaatgcgatatctgagcgtgatcgtcttgaaatttatgaagatgtcttgttt
tttctgtcgaagaaagagaaggaacaagccaaacagttacgaaagaggaattgggaagct
ttgaagaacatactagataacatggctaatgtcacttactgtactacttggtcggaggct
cagcagtatctgatggacaatcctacatttgcagaagatgaggaacttcagaacatggat
aaggaggatgcactgatctgttttgaggaacatatcagggcattggaaaaagaggaggaa
gaagaaaaacagaaaagtttgcttagagaaagaaggcggcagcgtaaaaacagagaatct
tttcagctatttttagatgaactgcacgagcatggacaattgcattcgatgtcctcttgg
atggagttgtacccaaccataagctctgacatcagattcactaatatgcttggtcaacct
gttttttcatcaggatcaacagcacttgatcttttcaagttctatgttgaagacttgaaa
gcacgttaccatgatgaaaagaagataataaaagatatcttaaaggtgagaggggaagat
gctccattatgtggtttctcttttaatgccaaatatatcattgaagtgaactctctggta
ctgggagatgggatttcacattgcgttaatgtcatgtgcgttattagcactgaagtgaga
gtttctgacttacctgatgccaaagaagcaattttcttacaggataaaggatttgtggtt
gaagtgaatacttcttttgaagactttgttacggtcatcagctcaactaaaagagctact
actttagatgcaggaaatatcaagctggctttcaacagtctgctagaaaaggcagaagcc
cgtgaaagagagagggaaaaagaagaagctcgcaaaatgaagcggaaagagtctgctttc
aagagtatgttgaagcaagctactcctccaatcgagttggacgctgtctgggaggatatc
agagatagatttgtgaaggaaccagcatttgaagacatcactctggagtctgaaagaaaa
agaatatttaaagatttcatgcatgtactagagcacgagtgtcagcatcatcattcaaag
aacaagaaacattctaaaaagtctaaaaaacatcacaggaagcggtctcgttcccgttcg
ggctcagagactgaggatgatgatagccattcaaagaaaaaaaggcagcgttcagaatct
agatcggtttctgagcgttcttccagtgcagaatctgagagaagttacaagaagtcaaaa
aaacacaagaaaaagagcaagaagagaagacataagtctgattcaccagaatcggatctt
gaacgagaaaaagataaaaaagaaagagagagagagagtgaaaaggatagagctaggcaa
agatctgaatcaaaacataaatctcctactaaaaaacgacctggaaaagattctgggaac
tgggatacttctggcagtgagctgagtgaaggggagctggaaaaacagaggaggactctc
ttggaacaactggatgaagatcaatga
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