Gavia stellata (red-throated loon): 104259113
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Entry
104259113 CDS
T08384
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-4-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04514
Cell adhesion molecule (CAM) interaction
gste04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
104259113
04519 Cadherin signaling
104259113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gste04515
]
104259113
Cell adhesion molecules [BR:
gste04515
]
Cadherins
Major cadherins
104259113
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
F59B103_C
NCMAP
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
104259113
NCBI-ProteinID:
XP_009812728
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
KTSVKIKCLKLVFDCFPYHANLTRFFHLLLSVLVKFNNCAGNKGVRYETNSLEFKVRADG
TMYAAHQVQMPSKQLILMVTAWDPQTLGRWEAIVRFLVAEKSQHNGHKPKGRKTMPGELA
QQQSDTLLPWRQHQSANGLRRQKRDWVIPPINVPENSRGPFPQQLVRIRSDKDKEIHIRY
SITGVGADQPPMEVFSIDPVSGRMYVTRPMDREERASYHLRAHAVDMNGNKVENPIDLYI
YVIDMNDNRPEFINQVYNGSVDEGSKPGTYVMTVTANDADDSTTANGMVRYRIVTQTPQS
PSQNMFTINSETGDIVTVAAGLDREGIQQYIVIVQATDMEGNLNYGLSNTATAIITVTDV
NDNPPEFTTSTYSGEVPENRVEVVVANLTVVDRDQPHSPNWNAIYRIISGDPSGHFTIRT
DPVTNEGMVTVVKAVDYEMNRAFMLTVMVSNQAPLASGIQMSFQSTAGVTISVTDVNEAP
YFPTNHKLIRLEEGVPTGTVLTTFSAVDPDRFMQQAVRYSKLSDPANWLNINATNGQITT
AAVLDRESDYIKNNVYEATFLAADNGIPPASGTGTLQIYLIDINDNAPELLPKEAQICEK
PNLNVINITAADADIDPNIGPFVFELPSVPSAVKKNWTITRLNGDYAQLSLRIMYLEAGV
YDVPIIVTDSGNPPLYNTSIIKVKVCPCDENGDCTTIGAVAAAGLGTGAIIAILICIIIL
LTMVLLFVVWMKRREKERHTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPET
MDHVLNKTPGVRRVDERPIGAEPQYPIRPVIPHPGDIGDFINEGLRAADNDPTAPPXXXX
XXRGAGSSSGSVSSLNSSSSGDQDYDYLNDWGPRFKKLADMYGGGEED
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
aagacatcagtgaaaattaaatgtctgaaacttgtatttgattgctttccttatcatgcc
aatctcacacgtttcttccatctcttgctctctgttctagtaaaatttaataactgtgct
ggtaacaagggagttcggtatgaaaccaacagcctggaattcaaggtgagggcggatggc
accatgtatgctgcccaccaggtgcaaatgccctcgaagcagctgatcctgatggtgacc
gcgtgggatccccagaccctgggcagatgggaggcgattgtcaggtttctggtggcagag
aagtcgcaacacaatggacacaagccaaaaggaaggaagaccatgcccggagaactggcg
cagcagcaaagcgacactctgctcccgtggcgccagcatcagagtgctaacggcctgcgg
cggcaaaagcgagactgggtcatcccacccatcaacgtgccagaaaactccagaggaccc
tttccacagcagctggttcgaattcgttccgataaggacaaagagatccatatcagatac
agcatcactggagtgggagccgaccagccgccgatggaagtcttcagcattgaccctgtg
tctggcaggatgtatgtgactcgcccgatggacagagaagaaagagcttcctaccatctc
cgggctcatgcagtggacatgaatggaaacaaggtggagaatcctattgacctttacatc
tatgtgattgatatgaatgacaacagaccagagtttataaaccaagtctataatggatct
gtggatgaaggctctaaaccaggtacctacgtgatgacagtgacggcaaatgatgcagat
gatagtactacagcgaacgggatggtgagataccgaatcgtgactcagaccccgcagagc
ccatcgcaaaatatgtttactattaacagcgagacgggagacattgtcactgtggctgcg
ggacttgacagagaggggattcagcagtatatagtcattgttcaagccacagatatggaa
ggaaatcttaactatggtctctcaaacacggcaacagcaatcattacggtgacagatgtg
aatgacaacccacctgaattcaccaccagcacttattcaggagaagttcctgagaacaga
gtggaggttgtggtagcgaatctgacagtggtggaccgggaccagcctcactctcccaac
tggaatgccatctaccgcattatcagcggagacccctccggccatttcaccatccggaca
gaccctgtcaccaacgaagggatggtaaccgtcgtgaaggcagtcgattacgagatgaac
agagctttcatgctgacagtgatggtatcaaaccaagctcccctggccagcggcatccag
atgtccttccagtcgacagcaggagtcaccatttcagtcacagacgtcaacgaagcaccg
tatttcccaacgaaccacaagttaatcaggctggaggaaggggtgcctacggggacagtc
ctgacaacgttttcagcggtggatcctgatcgcttcatgcagcaggcagtaagatactct
aagctgtcagatcctgcaaactggctgaacattaatgccacaaatggtcagatcactact
gctgctgtccttgatcgagagtcagactacattaagaataatgtctacgaggccacattc
ttggcggctgacaacggtataccccccgcaagcggtactggcactctgcagatctaccta
atcgacatcaacgataatgctcctgagctcctgccaaaggaggcacagatctgtgaaaag
ccaaacctgaatgtcatcaacataacagccgcggatgctgacatcgatccaaacattggg
ccctttgtcttcgagctgccaagtgtgccatctgcagtgaagaagaactggaccataaca
cggctgaatggcgattacgcccagcttagtttacgaatcatgtacctggaagcgggtgtg
tatgatgtgccaatcatcgtgacggactcaggaaaccctcccttgtacaacacatccatc
atcaaagtgaaggtgtgcccatgcgatgagaacggcgactgcaccaccatcggggcggtg
gctgcagcggggctgggcacgggtgccatcatcgccatcttgatctgcatcatcatttta
ctaaccatggttctgctgttcgtggtgtggatgaaacgccgggagaaggagcgccacacc
aagcagctcctgatcgaccccgaggacgatgtcagggacaatattctgaagtatgatgaa
gagggaggtggagaggaagaccaggattatgatttaagccagctccagcagccagagacc
atggatcacgtgctgaacaagacacctggagtcagaagggtggatgaaagacctattggt
gctgaaccacagtatcctataagaccagtaatcccacatccaggggatattggtgacttt
attaatgagggcctgcgtgcggcggacaacgaccccacggcccccccnnnnnnnnnnnnn
nnnncccgtggcgccggctcctcctccggctccgtcagctccctcaactcctccagctcc
ggggaccaggactacgactaccttaacgactgggggcccaggttcaagaaactggcggac
atgtatgggggaggcgaggaagattaa
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