Gavia stellata (red-throated loon): 104259330
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Entry
104259330 CDS
T08384
Symbol
CYLD
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04217
Necroptosis
gste04622
RIG-I-like receptor signaling pathway
gste04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
104259330 (CYLD)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104259330 (CYLD)
04625 C-type lectin receptor signaling pathway
104259330 (CYLD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gste01002
]
104259330 (CYLD)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gste04121
]
104259330 (CYLD)
Enzymes [BR:
gste01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104259330 (CYLD)
Peptidases and inhibitors [BR:
gste01002
]
Cysteine peptidases
Family C67
104259330 (CYLD)
Ubiquitin system [BR:
gste04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104259330 (CYLD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
COX_ARM
Motif
Other DBs
NCBI-GeneID:
104259330
NCBI-ProteinID:
XP_009812990
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MESRKSKFILLGRAXXXXXXXXXXXECSVVDKQTQKLLKVPKGSIGQFFQDRSSVGHSRN
IPCKGKKLQIGLKILEQPHAILFVDEKDVIEINEKLAELLLAITNCEERYSLFKSKSRLT
KGIQIDIGSPVRVQLRSGDDKFPGVVRFRGPLLQERSLTGIYFGVELLEEGRGQGFTDGQ
YQGKQLFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVDAMQVELPPLEINSRVSLKI
GESIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHIN
DVIPETVSQDRRPPKLAYTSRGGGDKSLFNHSKPKATGSTSEPGNRNRSEVFYTLNGSSV
DSQPQTKTKPPWYIDEVAEDPAKSLTDSSPGFGHSSPPLQPPLTNSVSTENRFHSLPFSL
TKTSSTNGTIGHSPLSLSVQSVIGDVNTTANQESPSTAGPVGNSHGLEAGSLAEVKENPP
FYGVIRWIGQPPGVNEVLAGLELEDECAGCTDGTFKGTRYFTCAPKKALFVKLKSCRPDS
RFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLETMIGKKKGIQGHYNSCYL
DSTLFCLFSFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLR
KILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMDKNE
KVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITDLLED
TPRQCRICGGLAMYECRECYEDTDISAGKIKQFCKTCNTQVHLHPKRQSHKFNPLSLPKD
LPDWDWRHGCIPYQKMELFAVLCIETSHYVAFVKYGRDDSAWLFFDSMADRDGGQNGFNI
PQVTPCPEVGEYLKMSLEELHSLDSRKIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaagaaaaagcaagttcatcctattgggaagagcgnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnaagaatgcagtgtcgtagacaagcagactcaaaagctcttgaaagtg
cccaaaggtagcattgggcagttttttcaagaccgttcttctgtgggacactccagaaat
attccttgtaaaggcaagaaactgcagattggattaaagattctggaacaacctcatgca
atcctgtttgtggatgagaaggatgttatagaaataaatgaaaaactagctgagttgctt
ttggccattactaactgtgaggaaagatacagtctgtttaaaagtaaaagcaggttaact
aaaggcatccaaatagatattggctcgcctgttagagtacagctgagatcaggagatgat
aaatttcctggagttgttcgcttcagaggaccgttactacaagaaaggtccctaacaggg
atatactttggagtagagttgctggaagaaggtcgcggtcagggatttactgatggacag
taccaaggcaagcagcttttcagatgtgatgaggattgtggggtttttgttgctttggac
aaactggagctggtggaagatgatgacaatgaactggaaagtgactatgcagctccagtt
gatgcaatgcaggtagaacttcctcctctggagatcaactccagggtttctctgaagata
ggagagagtatagagtatgggacagttatattctgtgatgtcttaccaggaaacgaaagt
ttaggatacgttgttggagtggacatggataatcctattggaaactgggatggaagatat
aacggaatacagctgtgcagttttgcaagtgttgaaagtacacttcttttgcatatcaat
gatgttattccagagactgtgtcacaggacaggagacctcccaagcttgcctatacctca
agaggtggtggtgacaaaagcttgttcaaccatagtaagccaaaggctacaggatctacc
tctgaacctggaaatagaaacagatctgaagtcttctacacattaaatggctcatcagtt
gactctcagcctcaaacaaaaacaaaacccccatggtatattgatgaagttgctgaagac
cctgcaaaatcacttactgattcatctcctggatttgggcattcttcaccaccactgcag
ccacctttaacaaactctgtgtctacagaaaacagatttcactccctcccttttagcttg
acaaaaacgtcaagtactaatggtactattggacatagtcctctttctttatctgttcag
tcagtcattggtgatgtaaatactacggctaaccaggagagcccatcaacagcaggccca
gtggggaactcacatggtcttgaagcaggttccttggctgaagttaaagaaaatcctcct
ttctatggagtaatccggtggattggccagccccctggagtaaatgaagtattagctgga
ctggaactggaagatgaatgtgcaggttgtacggacggaacatttaaaggaactcgatac
ttcacttgtgctccgaagaaagctctttttgttaaactcaaaagctgcaggccagattcc
aggtttgcctcgctccagcctgtttccaaccagattgaacgctgcaattctctagccttt
ggaggttacttaagtgaagtggtagaagaaaacactcctccaaaaatggaaaaagaaggt
ttagagacaatgattggaaagaagaaaggtatccagggtcattacaactcctgttactta
gactccaccttattctgcctgttttcttttagctctgttttggacactgtgttactcaga
cctaaagaaaagaatgacgtagagtattatagtgagactcaagagctgttgcggacagag
attgtgaatcctctgagaatatatggatatgtatgtgctacaaaaataatgaaactgagg
aaaatacttgaaaaagttgaggctgcatcaggattcacttcagaggaaaaagatccagaa
gaatttttgaatattttatttcaccatatcctaagagttgagccactgttgaaaataaga
tcagcaggtcaaaaagtacaagactgttacttctatcaaatttttatggacaaaaatgag
aaagttggagtcccaaccattcagcaattattagagtggtcattcatcaacagcaacttg
aagtttgcagaggcaccatcgtgcctgattatccagatgccgcggtttggaaaagacttc
aaaatgttcaacaaaatttttccatccttggaattaaatataacagacttacttgaagat
actcccaggcagtgccgtatatgtggagggcttgctatgtatgagtgcagagaatgttat
gaagatactgatatttctgctgggaaaatcaagcagttctgcaaaacctgcaatacacaa
gttcatcttcatcccaagagacagagtcataaattcaatccattgtcactacctaaagat
ctgccagactgggattggcgacatggctgcatcccgtaccagaagatggagttgtttgct
gttctctgcatagaaacaagccactatgtagcttttgttaaatacgggagggatgactcc
gcctggcttttctttgacagcatggcagatagggatggtggtcagaatggctttaacatt
ccacaagttaccccatgtccagaagttggcgaatacctgaagatgtctctagaagaatta
cactcgctggattccagaaaaattcaaggttgtgcacgaagactactttgtgatgcgtac
atgtgcatgtatcaaagtccaacgatgagtttgtacaaatga
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