Gavia stellata (red-throated loon): 104259354
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Entry
104259354 CDS
T08384
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9-like
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gste03036
]
104259354
Chromosome and associated proteins [BR:
gste03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104259354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
104259354
NCBI-ProteinID:
XP_009813016
LinkDB
All DBs
Position
Unknown
AA seq
2868 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDVQ
NQQKMSEFDQLSQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPIHPQNQSNGMFPDVAD
GSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRSQQ
SRNNTGQDALSQPKDFMEVNVSTSHRVGVNHPPPVSNPSTSQQPLSVQQFSQTASASIHF
CGNQEGNFDGQSPTITPCSVNNSQQFSSPYSYSNNHISPTSLLQSTTDLSTSQQTHSISD
FTGSDAFTSQTGTKQETTEHILNPNTPLNSNSFQMLHSAHPQGNFSSSKLSPVNINFPAS
TGSASQISHFTDAIESNGFTSLDENLLHQVETHNEPFTGLDPDDLLQEDLLPQFDDSAFV
QDSTSHVLEHDLEHITPPSSDLVRAQSQSQIHPWHSSVSNQHLQDRSRVTLQGQPPSSKK
TDGSGSYTKLQNTQVRAMSEKKQKKKADSESKQEKANRIISEAIAKAKERGERNIPRVMS
PENFPSVSAEGKEEKKGRKVKSKPKDKESKKPKTGSSSKIKEKTKIGKLIITLGKKQKRK
NESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSVKIKKNS
APLLAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVETEEFFVKYKNYSYLHC
EWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSLCEDKD
TGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPNSWKKI
EQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLAGIR
GPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGTYR
FQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTP
LQNTVEELFSLLHFLEPLRFPAXFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKL
APKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLI
KGAEEKILGEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRC
LDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSQPDSDRFVFLLCTRAGGLGINLTAA
DTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAV
LQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTI
TIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVIDTPRI
RKQTRPFSATKDELAELSEVESEGDDKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRW
REILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQN
HLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHCNKVLLR
VRMLYYLKQEVIGNEFQKVFDGIDASEIDVWVPEPDHSEVPAEWWDADADKSLLIGVFKH
GYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPAMFKDDIED
DVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQIQPAFPI
QTSMMQPPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGRFDWTKFR
AMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERASRTLYRIEL
LRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTDYHILRDP
ELSFMSAQRNYNQNKVALSRTSTPLLHQYQMALSASPLTPQSRLSDAKVNAFEDTKAKSE
NLKEDPQSSEEESMSTEETQTTMKSEPLSPKNGTPIQNTDHKPSVKTETDRRMVAARTEP
LTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSGSSSSSSS
SCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEAQKREGTAHIKAYDEESVASLSTTQDE
TQDSFQMNNGTPNSSYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSARRSYDS
NTVASFYTTKLMDSPGAAADYSEPSAPTPPLTGVKEEYDQSPQMSKEGGLKLTFQKQGLS
QKRPFESEEGALGQQQYLARLRELQNASETGLVNFPKSLPESGTSSHLTASANGVIVDSQ
PVAKKRRGRRKNVEGVDVLFINRNKQPNHVNPGINSCQVAAGINPALTYTQSQGMLDAES
PVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYVEDSGACISRMQLHDGRPKQKRHRCR
NPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKENPEYGVAPEWGEVVKQ
SGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAKATAAAAAATAASVSVNPLLANGLLP
GVDLPSLQALQQNLQNLQSLQVTAGLMGMPAGLTAGGEAKNMAAMFPMLLSGMAGLPNLL
GMGGLLTKSTESISEEKKGSDSKEADTKKERTEDQNMDTGGENSVSSSPSTSSAAAAANP
LSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFDVQNSESNDTGSAKPTEEKEENSRV
RDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTSSSSEDSDSSDED
NT seq
8607 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcaacctggacctgtttcacttgttgatgaattgaat
ttgggtgcagaatttgaacctttgcacatagactcattgaaccatgtgcaagatgttcaa
aatcaacaaaagatgagtgagtttgatcaactgagtcagtatgattcactgaaacttcac
tcagtaaatcagtctttcaatagctcagctgacaacgtcttatcaccacactctcaattc
aattgttcaccaattcatccgcaaaaccagtctaatgggatgtttccagatgtggctgat
ggtagtcctatgtggggtcatcaaactgccacgactgtttcgaatcaaaatgggtcaccc
tttcaccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccgcagcatcagtgtgcctcgctacggtcacaacaa
agcagaaacaacacggggcaagatgctctgagtcagccaaaagacttcatggaagttaac
gtatctacttctcacagagttggtgttaaccacccacctccagtttctaatccatcaact
tcacagcagcctctgtctgttcaacagttctctcaaactgcaagtgcttcaatacatttt
tgtgggaatcaggaaggaaattttgatggacagtccccaactattactccatgttctgtc
aataatagccaacaattttcatctccttattcttactccaataaccacatttctcctacc
agccttcttcagtctacaacagatctttctactagccagcagacacactctatctctgac
ttcactggaagcgatgcctttacatctcaaacagggaccaagcaagaaacaactgagcac
attttgaatcctaatacacctttgaattcaaatagttttcaaatgttgcattctgcgcat
cctcagggcaacttcagtagttcaaaactctctcctgtgaatattaattttccagcttct
actggttctgcttctcagataagccatttcactgacgctattgaaagcaatggttttaca
tctttagatgagaacttacttcatcaagtggagactcataatgaaccatttacaggactt
gacccagatgacctccttcaggaagaccttctgccacagttcgatgattctgcatttgtt
caggatagcacaagccatgttttagagcatgacctagaacatataaccccaccgtcatct
gatctcgttcgggcacagtctcaaagtcagatccatccttggcattcttcagtttctaat
cagcatctgcaagacagaagtcgtgtaaccttacaaggacagcctccttcctctaagaag
actgatggttcaggatcctatactaagttgcagaatacccaggtgagggcaatgtctgaa
aagaagcagaagaaaaaagcagactcggaaagtaaacaagagaaggcaaatcgcataata
tctgaagcgattgcaaaagcaaaagagagaggagagagaaacattccacgagtaatgagt
cctgaaaacttccccagcgtttcagctgaaggaaaagaggaaaagaagggtagaaaagtt
aaatccaaaccaaaggacaaggagagcaaaaaaccgaaaacaggttcctcgtccaaaatt
aaagagaaaacaaaaattggaaagctaatcatcacactgggtaagaagcagaaaaggaaa
aatgaatcttcagatgaattgtctgatgctaagcagactccacagcggccattgaaagat
gaagactcacagaagagaagatcaaatcgtcaagttaaaaggaaaaaatatgctgaagaa
ggagaaggaaaacaatcagaagaagaagctaaagtttctgtgaaaatcaagaagaattct
gcccctttacttgctgaacagcctttacaattatttgtggaaaatccaagcgaagaagat
gcagcaattgtagacaaaatcttatcctccagggtaataaagaaagaaatatctgctggg
atgacagtagaaacagaagagttttttgtaaaatacaagaactactcttatctccactgt
gagtgggccacagagcaacagcttttaaaggataaaagaatccagcagaaaataaaacga
ttcaaactaaggcaagcacagagagctcacttttttgcagatatggaagaagaacctttt
aatcctgactatgttgaagtagaccgggtattagaagtatctctttgtgaagataaggac
actggtgagcctgttatttactatttagtaaaatggtgttcgttgccatatgaagacagt
acgtgggagctgaaagaagatgtagatcaagcaaaaatagaagaatttgaacaattgcaa
gcttccaggcctgactcaaggagattggaccgaccacctccaaactcctggaagaagata
gaacagtcgagggaatataaaaatggcaatcagctcagggaatatcaactggaaggactt
aactggctcctattcaactggtacaataggcgaaactgcattttagcagatgaaatgggt
cttggcaaaaccattcagtcaattacattcctctatgaaattctcctggctggtataaga
gggccttttctcatcatagctccactttccactataacaaactgggaaagagaatttcgc
acgtggactgaccttaatgttgtggtgtatcatggaagtatgatcagcaggcagatgatt
cagcagtatgaaatgtacttcagggactcccagggacgtattgttcgaggtacctacaga
ttccaagccattatcacaacttttgaaatgattcttggtgggtgtccagagttaaatgca
attgaatggcggtgtgttattattgatgaagctcacaggctgaagaacaaaaattgcaaa
ctcttggaaggactaaaattaatgaaccttgagcataaagtgctgttaacgggtacccca
ctgcagaacacagtagaagaattatttagcctccttcattttcttgaaccattgcgtttt
cctgctnaattcatgcaagaatttggagaccttaaaacagaggagcaggttcagaaacta
caagctattctgaaacccatgatgctcagacgattaaaggaagatgtagaaaaaaagttg
gctcctaaggaggaaactataattgaagtagaactaactaatattcagaagaaatattac
cgagcaattttggagaagaattttgcattcttatccaaaggagccgggcaagcaaatgta
cccaatctggttaacactatgatggaactcagaaagtgttgcaatcacccttatctcatc
aaaggtgctgaagagaaaatccttggagagtttaaagaaacctatagcccaagtgctcct
gacttccatctgcaagcaatgatacagtctgctggtaaattggttcttattgataaactt
cttccaaaaatgaaagcaggaggccacaaggtccttatcttctctcaaatggtacgctgc
cttgatattttagaggattatcttatacataaaagatacttatatgaacgaattgatggg
cgagtacgagggaatctcagacaagctgcaattgaccggttcagccaaccagattccgat
cgctttgtcttccttctgtgcaccagagctggtggtctgggcattaatttgactgcagca
gatacgtgtattatttttgactctgactggaatcctcaaaatgatttgcaggctcaagcc
cgttgtcacaggattggtcagaacaaagcagtgaaggtctacaggctgataacgcgtaac
tcctatgaaagagagatgtttgacagagcaagtctaaaactgggactggataaggctgtc
ttacagagtatgagtggaagagaaaacagtgtcggtggtatccaacaactctccaaaaaa
gaaatagaagacttgcttcgaagaggtgcctatggtgccattatggatgaagaagatgaa
ggctctaaattctgcgaggaagacattgaccaaattttgcagcgtcgtactaaaactatc
acgattgaatcagaagggaggggctccacgtttgccaaggctagttttgttgcatctgga
aacaggactgatatttcactagatgatcccaacttctggcagaaatgggccaaaaaagca
gaaatagatatagatgctatcagtggtagaaacagcctggttattgataccccaagaatt
aggaaacaaacacggccctttagtgctacaaaagatgagctggctgagttatctgaagta
gaaagcgagggtgatgataaaccaaaactccgcaggccttgtgaccgttccaatggatac
ggaagaacagagtgctttcgggtggaaaaaaacttgctggtctatgggtggggtcgatgg
agagaaattttgtcacatggtcgcttcaagagacagctgaatgaacaggatgtggagata
atttgccgagctctgttagcctattgtcttgttcactacagaggggatgagaaaataaaa
agttttatatgggatctcattaccccaacagaggatgggcaaacacgagagctacagaat
caccttggcttatcagcccctgtgcctagaggaagaaaggggaaaaaagtgaagacccag
gctagcacttttgatatacacaaagcagaatggcttcgaaaatacaatccagaacatctg
ttgcaagatgaaggatacaaaaagcatataaaacaccattgcaacaaggtcttgcttcga
gtaagaatgctgtattacttaaaacaagaagtcattggtaatgaattccaaaaggtgttt
gatggaattgatgccagtgaaattgatgtttgggtccctgagccagatcactctgaagtt
cctgccgagtggtgggatgcagatgcagataaatcccttctaattggagtttttaaacat
ggttatgaaaaatacaacactatcagagcggacccagcgctgtgcttcttggaaagggtt
ggcaagccagatgaaaaagcagttgctgccgaacagagagcaaatgattatatagatggg
gatgtagaagatccagaatataaaccagcaccagcaatgtttaaagatgacatagaggat
gatgtttcatccccaggtgatctagtaatagcagatggagatggacaaatgatggaagga
gacaaaatctactggcccactcagtctgccttaacaacacgtcttcgccgcctaataaca
gcttatcaacgaacaagtaaaaataggcaggcccagcagatccagccagcattcccaata
caaactagtatgatgcagcctccatatgaagaagctgctctaaatccaaagatggctgct
aagattgaaagacagcaaagatggacgagaagagaagaagctgacttttatagagttgtg
tccacgtttggagttgtgtttgatcctgaaaggggacgatttgattggaccaaatttaga
gcaatggctaggctacataagaaaactgatgagagcttagagaagtacttgtatgcattt
atgtcgatgtgccggagagtctgtcgtctcccctcaaaagaagaactcgtagacccaaac
atttttatccagccgattacagaggagcgtgcttctcggactttgtatcgcattgaactc
ctaaggaaagtgagagaacaggctcttagacacccacagttgttcgaacgactaaaacta
tgccagccaaacccagacttacctgtctggtgggagtgtgggactcatgacagggattta
cttattggagctgctaaacatggagttagcaggacagattatcatattcttcgtgatcct
gaactctcatttatgtctgcccagaggaactataatcaaaataaagtggcactctcaagg
acttctactccactcttgcatcagtaccagatggcgttatctgcttctcctcttacacct
cagtcaagattgtcagatgctaaagtgaatgcttttgaggacacaaaagctaaaagtgaa
aatctgaaagaggaccctcagtcttctgaagaggaatcgatgtctacagaggagacacag
acaacaatgaaatctgaacctttgagtccaaaaaatggcacaccaatacaaaatacagac
cacaaacctagtgtgaagactgaaacagacaggcgcatggtggcagcaaggacagagcct
ctaactccaaacccagcttccaaaaaacagagagtcagcaaaaggggatctgactctagc
tctgactcagactctgactcagatagatcttcctgttcttccaggtcatcttcttcatcc
tcttcgtcttcctcatcttgttcacactctcggtcaggctctagctcttcatcatcttca
tcttgttcttcagcatcttcatcctcatcgtcgtcgtcgtcatcatcctcctcgtcgtca
tcatcatcatctgaagagagtgatagtgaagaagaggaggcacaaaaacgtgaaggaacc
gcgcatataaaagcatatgatgaagagagtgtagcctctctgagtacaacacaagatgag
acgcaagacagtttccagatgaacaatgggacaccaaattccagttatctcctacaaggt
ggatacatgttggcggcgtcctactggccaaaggatcgagttatgattaatcgacttgat
agtatttgtcaaacagtgttgaaaggtaaatggccttcagcaagaaggagctatgacagc
aatacggtggcatctttctatacaaccaaacttatggatagcccaggtgcagctgcagat
tacagtgagcccagtgcaccaacaccccctcttacaggtgttaaagaagaatacgatcaa
tcaccacagatgtcaaaggaaggtggtttgaaattgacttttcagaagcagggactgtct
cagaaaaggccatttgaaagcgaggaaggtgcattgggacagcagcaatacctggctcgg
ctacgtgaactccagaatgcttcagaaaccggccttgtcaacttcccaaaatcgcttcct
gaatcaggtacttccagtcacttaacagccagtgccaatggagtcatagttgacagtcag
cctgtagccaaaaagagaagaggaagaaggaagaatgtagagggagttgatgtccttttt
ataaatagaaataaacagcctaatcatgttaatccaggtattaactcctgtcaagttgct
gcaggaataaacccagcactcacttacacgcagtcccaaggcatgcttgatgcagagagt
ccagttcctgttattaacctaaaagatggaacaaggcttgcaggtgatgatgcccccaaa
agaaaagatttagaaaggtggcttaaagaacatcctggatatgttgaagattcaggagct
tgtatatctaggatgcagctgcacgatgggagacccaaacaaaaaagacaccgttgtcga
aaccctaataaactggacgttaatagtttgactggtgaggaacgtgttcagctcataaat
agaagaaacgcaagaaaggtggggggtgcgtttgctccccctctgaaggatttgtgcagg
ttcttgaaagaaaatccagagtatggagtggctcctgaatggggagaagttgtaaaacag
tctggatttcttccagaaggtatgtttgaccgtattctcactggacctgttgtgcgggaa
gaagtaagccggagaggaaggcgccccaaaagtgagattgctaaggcaacagcagctgca
gcagctgccacggctgcaagcgtatcagttaaccctctgctagctaacggattgcttcca
ggagtggatctgcctagtcttcaggccttacaacaaaacctgcaaaacctgcagtcactg
caagtaacagcaggattaatgggaatgccagctggcttgactgctggaggagaagctaag
aacatggctgccatgttccccatgctgttgtcagggatggctggattaccaaacttgctg
ggcatgggaggacttctaacaaagtctacagaatctatttcagaggaaaaaaagggaagc
gattcaaaggaggcagatacaaagaaagaaaggacagaagaccaaaatatggatactggt
ggtgaaaactctgtttcaagttctccttcaacatcctctgctgctgcagctgccaatcct
ctttctcttaaccccttacttttgtccaacatactttacccagggatgcttctcactcca
ggccttaatcttcatatcccagctttgtctcagtctaatatttttgatgtacagaacagt
gaaagcaatgacacaggctcagccaagcccacagaagaaaaggaggaaaattctagggtt
agagatcaggaagacaaagggggaacagagccaagctctcacaatgaaaacagcacagat
gagggttcagagaaagcagatgcttcatctggatctgatagtacatcatcttcatctgag
gattcagattctagcgatgaagactga
DBGET
integrated database retrieval system
