Gavia stellata (red-throated loon): 104259720
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Entry
104259720 CDS
T08384
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03013
Nucleocytoplasmic transport
gste03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104259720 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
104259720 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104259720 (THOC2)
03041 Spliceosome [BR:
gste03041
]
104259720 (THOC2)
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104259720 (THOC2)
Spliceosome [BR:
gste03041
]
Complex C
Other components
EJC/TREX
104259720 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104259720 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
104259720
NCBI-ProteinID:
XP_009813514
LinkDB
All DBs
Position
Unknown
AA seq
1579 aa
AA seq
DB search
MSISKPVQLCRALSENKSHDNMGFRDIQQALYELAYHVVRGNLKHDQASNVLGDVIEFRE
DMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVLKERLDPDTLESLGLI
KQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIKS
LIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQDP
SGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIVEAKQIVRKLTMVVL
SSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQSIMDQMPPFYATSHKP
IAIALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADSFEDLRKEAFNMLCYL
GPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMEILFSCLLSITDQVLLPSLSLM
DCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTK
ENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIE
ALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLI
LKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDL
ALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVP
SIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKVHKYITSCELVMA
PVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVNKLKVQMKAIDDNQE
MPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFL
QLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASR
YGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVH
KWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEK
RPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVAATVQNGPGGAGMPTSLTINT
VRLEEGTTEETDKLKEKSQGVVKVINKAVNATPKVATSNGNSASNSKIIKEKDDKEKSGK
EKDKEKKEKTPAATPEMKALGKEGKDKPKEERANKDDKAREIKEKTPKSEKEKEKVKKEE
KASKEEKSKTVVTIIESKSTAEKEREKEPSRERDVAKEIKSKENAKGGEKMPVAGSLKSP
VPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELKDSSAKHYINHTTPTLSKSKERE
VDKKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSK
SESPSDSPRLNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKKESRHDKEKTEKKEKR
DSTGGKEEKKHHKSSDKHR
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atgtccatttctaagcccgtgcaactatgtcgcgcactcagtgaaaacaaaagccatgat
aatatgggtttcagagatatccaacaggctttgtatgagcttgcataccatgttgtcaga
ggaaacttaaagcatgatcaagcctctaatgttcttggtgatgtcatagaatttcgggaa
gacatgccttccatcctagctgacgtattctgcatattagatattgaaacaagttgttta
gaagaaaaaagtaagagggatcattttacccaactggtattagcctgtttgtatcttgta
tctgacactgtcctaaaggagcgtttagatccagacacactggagtcattaggacttatc
aagcagtctcaacagttcaatcagaaatcagttaaaataaagacaaaactattttataag
caacagaagtttaatttgttaagagaggagaatgaaggttatgcaaagctcattgcagaa
ctggggcaagacttatctggaaatatcactagtgatttaatccttgaaaatatcaaatct
ttaataggatgttttaaccttgatcctaacagagttttggatattatcctagaagtctat
gagtgcaggcctgagtacgatgacttctttgtaccactgatagagtcttacatgtacatg
tgtgaacctcaaactctatgccatatccttgggttcaaattcaaattttatcaggatcca
agtggtgagacaccttcctccttatacagagttgctgctgtcctcttgcaacataatctc
atagatttggaagacctttatgttcatcttcttccaggcgataatgccatcatcgaggaa
cacaagcgagagatagtggaagctaagcaaattgtcagaaaacttacaatggtcgtctta
tcctctgaaaagactgaggaaaaggagaaggaaaaagaaaaagaggaggagaaaaccgaa
aagcctcctgataatcaaaagcttggtttattggaagctttattaaaaattggtgattgg
cagcatgcacaaagtattatggatcagatgcctccgttttatgctacttcacacaagcct
attgcaattgccctttgccagcttgtacatgtgactattgaacctctgtaccgcagagtt
ggtgtacctaaaggagctaaagggtcaccaatttcttctttgccaaacaagagagcacca
aaacaagcagacagctttgaggacttgagaaaggaagcgttcaacatgctttgttacctt
ggtccccatctctcccatgatcccattttatttgcaaaagtggtgcgccttggaaaagca
tttatgaaagagtttcagtctgatggaagcaaacaagaagataaagagaaaatggagata
ctgtttagctgtttgttgagtattaccgatcaagtcttacttccatcactttctttgatg
gactgcaatgcatgcatgtctgaagaattatggggaatgttcaaaacttttccataccag
taccggtaccgtctttatgggcaatggaagaacgaaacatacaatagtcacccgcttcta
gtgaaagttaaagctcaaaccatagaccgagccaaatatatcatgaagcgtttaactaag
gaaaatgtgaaaccctctggaagacaaattgggaagctcagccacagcaatcctacaatt
ttatttgattatattttatcacaaatacaaaaatatgataacctaataactccagttgtt
gattcactgaaatacctcacttcgctgaactacgatgtcttggcgtactgtatcattgaa
gctctggcaaaccctgagaaggagagaatgaagcatgatgacactacaatctcgagctgg
ctgcagagtctggctagcttttgtggtgcagttttccgaaaatacccaattgaacttgct
ggtctacttcaatatgtagccaaccaactgaaagctggcaaaagctttgatttgcttatt
ttaaaagaggtggtacagaaaatggcagggatagaaattacagaagaaatgacaatggaa
caattggaagccatgactggtggagaacaactaaaagctgagggtggatactttggccaa
atcaggaatacaaaaaaatcttctcagagattgaaagatgcattattggaccatgatctt
gcccttccactgtgcctgcttatggctcaacagagaaatggtgtgatctttcaggaggga
ggggaaaaacatctgaagctggtgggaaaactgtatgatcagtgccatgacaccctggta
caatttggtgggtttttagcatccaatctaagcacagaggattacattaagcgagtgcct
tctattgatgttctctgtaatgagtttcatacacctcacgatgctgcatttttcctctca
agacccatgtatgcacaccatatttcgtcaaagtatgatgaactaaaaaaagctgagaag
ggaaataaacagcagcacaaagttcacaaatacattacatcgtgtgagctggtgatggct
cctgttcatgatgctgtgatttctctgcaccttcccaaggtttgggatgacatcagtcct
cagttttatgctacattctggtctttgacaatgtatgaccttgccgtcccgcatagtagc
tatgacagagaagtcaataaacttaaagtccagatgaaagccatagatgacaatcaggaa
atgcctccaaataaaaagaagaaagaaaaagaacgttgcacagctcttcaggacaaactc
cttgaggaggagaagaagcagctggagcatgtgcagagggttctacagagactgaaacta
gagaaggataactggcttctggcaaagtctaccaaaaatgagactatcacaaaatttttg
cagttatgtatatttcctcgatgcattttttcggcaatcgatgcagtctattgtgctcac
tttgtagaactggtacatcagcagaaaacgcccaacttctccactcttctctgctatgac
agagttttctctgatattatatacacagttgcaagttgcactgaaaatgaagctagtaga
tatggcaggtttttatgctgtatgctggagactgtgactagatggcacagtgacagagtc
atatatgaaaaggaatgtggcaactatccaggcttcctaactatattacgggcaactgga
tttgatggtggaaataaagctgatcagttggattatgagaattttagacatgtcgtacac
aaatggcactataaattaactaaggcttctgtgcactgccttgaaacaggtgaatataca
catatcagaaatatcctgattgtgctgaccaaaatccttccatggtatccaaaagtgctg
aacctgggccaagccttggaaagaagagtacataagatatgtcaggaagagaaagagaag
agacctgatctatatgcattggctatgggctattctgggcagttgaaaagtaggaagcct
ttcatgatacctgaaaatgaattccaccacaaagacccacctgccaggaatgctgtagct
gcaacagtacaaaatgggccaggtggtgctgggatgcctacatctctcacaataaataca
gttagactggaagaaggcactactgaggagactgataaactaaaggagaagtctcagggt
gtggtgaaagttattaataaagctgttaatgctacaccgaaggtggcaacaagcaatgga
aacagtgcttctaatagcaaaattattaaagagaaagatgataaagaaaaaagtgggaag
gaaaaagataaagaaaaaaaagaaaagactccagctgccactccagagatgaaggcactt
gggaaggaggggaaggataaaccaaaggaagaacgggcaaacaaagatgataaagcaaga
gagatcaaggagaaaacaccaaaatctgaaaaagagaaggaaaaagtcaagaaagaagaa
aaagcttcaaaagaagaaaaatccaagacagttgttaccatcattgagtccaagtcgact
gcagaaaaggagagagaaaaggagccgtccagagaaagagatgtagcaaaggaaattaaa
tccaaggaaaatgctaaaggaggagaaaagatgccagtagctgggtccttgaagtcacct
gttccccgatcagaaacatcagaatctgaaagggaacaaaaacgccgcaaagttgataca
cattcttctccatcacattcctcaacagtaaaggacaacctcaacgaactcaaggactct
tcagcaaagcactacattaaccacactactccaacactgtccaagagtaaggagagagaa
gtggacaagaaagatttggacaagtcaagggaaagatccagagagagagagaagaaagat
gaaaaggacaggaaagatcgaaaaagggatcattcaaacagtgaccgagaggtaccacag
gattcaactaaacgacgcaaagaggaaaatgggacaactggttcttcaaaacatagtaaa
agtgaaagtccttctgattcccctcgcttaaatgaaaaggagaaggagaagaacaaatcc
aaatcttcaggaaaagagaaaggtgattcaattaaagcagaaaagatggagaagagctcc
tctggtagcaaaaaggaatcgagacatgataaagaaaaaacagaaaagaaagaaaaacga
gacagtactggagggaaagaagaaaagaaacatcataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system
