Gavia stellata (red-throated loon): 104259769
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Entry
104259769 CDS
T08384
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gste03021
]
104259769 (TAF1B)
Transcription machinery [BR:
gste03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
104259769 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
104259769
NCBI-ProteinID:
XP_009813577
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
RDFNERCAQCSEVNWGLTDGGRFYCRSCHNVTERTREVVRTDCLSNTRIQTISKGLRKQE
KIDGGCEWYVCEGFQLVLKKQAEALEALGVCPQMKDEILCNFWRRYLQKSKQAYCNRPAG
ETVKALSVCDSSTDVDSEPERPSLLHLSLSESEGDLQTDCSFASSTSRVSESTSVCSGSV
DGSLYLMKNQKEKLRMTMPMTLSFCYMALLWLREPMTLSDLLRFVVEGHIPYLNVFQHFP
EKMKLCGLDLKIFCVESWPVYEEVYSKILELAAFLDLPRFPDITDSCFLHPDILCMKYLM
EANLPDELHNWTCRVVKKICIGEADFLTLVPGNMSTRNVKYDIIAAAVIVVVLKLLFLLD
DHYEWLLSDFAAERNKNNKEGEGGPYFEFKKWYKVIKCCLDVEQKKLDEERAKYLWRCEK
PLFYSAEKKSKVLKRRQMVVNLQNQFGKLSGSVRPAEKPNPSSFQLSWSEENTDGSCFHG
HSLKGILQEKCGLLTALNPDYWLCTVKLCNEKLCGRLAHYREVDFPQSYHFVLRLFSFLL
RIQPSYIHEEVCVIEHKLFNKKLCKKSRYRPKEVKRPKNNSFKTV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
agagattttaatgaacgctgtgcccaatgttcagaagtgaactggggtctcactgatgga
ggcagattttattgcagatcttgccacaatgttactgagagaactagagaagttgtaagg
actgattgtctttctaatacaagaatccagacaatctccaaaggtttaagaaagcaggaa
aaaattgatggaggctgtgaatggtatgtttgtgaaggctttcagcttgtgctcaagaaa
caagctgaagctttggaagcactaggagtatgtccacaaatgaaggatgaaattctgtgc
aatttttggaggcgttatcttcagaagagcaaacaggcatattgcaacagaccagctggg
gaaactgtcaaagcattatcagtatgcgatagcagtactgatgtggacagtgaaccagag
agacctagccttcttcacttgtctctctctgaaagtgagggcgatctacaaactgattgc
agctttgcctcatcaactagcagggtctcagaaagcacctctgtgtgctctggatcggta
gatggtagcttgtatttaatgaagaaccaaaaggagaaactgaggatgacgatgccaatg
accctttcattttgttacatggcattactctggttgagagaaccaatgacactatctgat
ctattaaggtttgttgttgaaggtcatattccgtatttgaatgtttttcagcattttccg
gagaagatgaagttatgtggccttgatcttaagatcttttgtgtagagtcatggcctgta
tatgaagaagtatacagcaaaatacttgagctcgcagcatttttagacctacctcgtttt
ccagatataacagacagctgctttcttcacccagacattctgtgcatgaagtacttgatg
gaagctaatttacctgatgagttgcataattggacttgtcgagtggtgaaaaagatctgt
attggagaagcggatttcctgactcttgtgcctggaaatatgtcaacaagaaacgtgaaa
tacgatattattgctgcagcagttattgtagttgtgctcaaattattgtttctattagat
gatcactatgaatggttactttcagattttgctgcagaaagaaataaaaataacaaagaa
ggtgaaggtggtccgtattttgagttcaaaaagtggtacaaggttataaaatgttgcttg
gatgtggagcaaaagaaattggatgaagaaagagccaagtatctgtggagatgtgaaaag
ccactgttttattcagccgagaagaaatctaaagttcttaagagaagacaaatggttgtg
aacttacaaaatcagtttggcaagctgtctggatcagtgcgacctgctgaaaagccaaat
ccttcaagttttcagttaagttggtctgaagaaaacacagatgggagttgttttcacggg
catagcctgaagggaattttgcaagaaaaatgtggtttacttacagccctgaaccctgac
tattggctgtgcacagttaaactatgtaatgagaaattgtgtggtcgtctggctcattac
agagaagtggactttccccagagttaccattttgtactaaggttattctcctttcttctg
aggatacagccctcttatatccatgaagaggtgtgtgtgatagaacacaaactgtttaat
aaaaaactctgtaaaaagtcaagatacaggcctaaggaagtaaaaaggcctaaaaataac
agttttaaaactgtgtaa
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