Gavia stellata (red-throated loon): 104259794
Help
Entry
104259794 CDS
T08384
Symbol
ZSWIM8
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gste04121
]
104259794 (ZSWIM8)
Ubiquitin system [BR:
gste04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
104259794 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
104259794
NCBI-ProteinID:
XP_009813605
LinkDB
All DBs
Position
Unknown
AA seq
1660 aa
AA seq
DB search
FHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTCGAGAKWCAHVVALCLFRIHNASA
VCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPTAQRLLDELLSSQSTAINTVCGAP
DPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWA
CLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLEILTDQCLNYEQITGWWYSVRTSA
SHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLAVLDPTISPQRRRDLCLQLRQWQL
KVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAYPIPGITYSSTDKKNSFCWVKAIQ
QRSCRLQCAETACEAGRTHGLESGGPCLQPGDRLRPSPQEPAVRPKELTGKRKVVSETPQ
RVLRRLSAEGDKAVYKTAVGKAKLPVSKGLTSKHSGKRRMSSEDSSLEPDLAEMSLDDSS
LALGAEASNTFSFTESPLSRSYRDAFEEDGGVYFSEGPEPSVRSSSMAKKSPKDPVGEMG
SGDDDLPSADENSGGVSLKPEEVGENGAAGGGDDGEEEDDYQVYYLNPQEVAKEDDDKAE
GGNEEEQDIFAGIKPLEQENRMEILFACAEALYAHGYSNEACRLTVELARDLLANPPDLK
VEQPPTKGKKNKVSTSKQTWMATNTLSKAAFMLTVLSERLEYHNLAFRIGMFALELQRPP
ASTKALEVKLAYQESEIVALLKKIPLGTNEMNTIRGRAEELREGTLCDYRPVLPLMLASF
IFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTR
REKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQTLSSFYSSSKPTVANQKSPSK
HAAQSTAAIQQLPGTSVTQQAALSTAVQSSPENFVEKSAQESSQRSPCEPAAEATILKQE
GKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGW
ATTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGARAKTVEVGRYKGRRLESHAPHVP
NQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALG
LHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRAR
DSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYP
EVLFEVAHQWYWLYEQTVGGTPAQREGATGCSASGARAASEAALMPVISVGSTMYQQHTM
AGPAMAHTHTQGLHPYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQGVHPAFIG
AQYPYSVTTPSLAATAVSFPGVPVPSMTQIAVHPYHSETGLSLSSNVAIGSVHAGSTFPA
IQGASLTTLSSQPNSLVTGGFPAEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHN
DHPNNFSRSPPYTEDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLN
PAHVHNHLRTPAFHQLVQRCQQAYMQQIPXGSFXXXXXXIHLTPADYDDFVNAIRSARSA
FCLTPMGMMQFNDILQNLKRSKQTKELWQRVSLEMTTFSP
NT seq
4985 nt
NT seq
+upstream
nt +downstream
nt
gtttccatctgagtgccactgtggtacccccacagatggtgccacccaaaggtgcataca
acgtggcggtgatgtttgatcgatgcaggatcacgtcatgcagctgtacctgcggagctg
gggccaagtggtgtgctcacgttgtggcactgtgcctcttccggatacacaatgcatctg
cggtatgcttacgagcacctgtttctgagtccttgtctcggctacaaagagaccaattgc
aaaaatttgctcagtacctaatcagtgaacttccacaacagattcttccaactgctcagc
gcttgctggatgagctgttatcttctcagtctactgcaatcaacacagtgtgtggagccc
cagatcccactgctggaccctctgcctcagatcaaagcacctggtacttagatgaatcta
ctctgagtgacaacataaagaaaacccttcataaattctgtggaccctctcctgttgttt
tcagtgatgtgaattcaatgtatctctcttccacggagccaccagctgctgctgagtggg
cctgtctcctgcgtcccctgcgaggaagagagcctgaaggaatctggaacctgctttcca
ttgtgcgggagatgtttaagagacgggatagcaatgcggctcctttgctggagattctga
ctgaccagtgtctcaactatgagcagataaccgggtggtggtacagtgtgcgaacgtctg
catcacacagcagtgctagcggacacacaggacgcagcaatggtcagtcagaagtagctg
ctcatgcctgtgcaagcatgtgtgatgagatggtggttctttggaggctggctgtccttg
acccaactatcagtccacagaggcgcagggatctttgcttacagctcagacagtggcagc
tgaaagtcatagataatgttaagaggggtcagcacaagaaatcactggagaagctcttcc
agggttttaagccagctgtggaagcctgttacttcaactgggaggaagcttatcccattc
ctgggatcacatatagcagcactgacaagaagaactcattctgttgggtaaaggccatcc
agcagaggagctgcaggttgcagtgtgcagaaactgcctgtgaggctggtagaacccatg
gactggagtctgggggaccatgtctgcagcctggggacaggctgcgtccctctccccagg
agccagcggttcgtccgaaggaacttactggaaagcggaaagttgtctctgaaacaccgc
agagggttctgagacgactttcagcagaaggtgataaagctgtgtataagactgcagtgg
gcaaagcaaaattgccagtgagcaaaggcttgaccagtaaacatagtgggaaacgccgca
tgagcagtgaagacagctctctggagccagacttggcagagatgagcctggatgacagca
gcttggctctgggggcagaagccagcaacacatttagttttacagaaagcccacttagca
ggagctacagggatgcctttgaggaggatggtggggtctacttctctgagggacctgagc
ctagtgtcaggagcagttccatggccaagaaatcgcccaaggatcctgtgggggaaatgg
gtagtggtgatgatgacctgccttctgcagatgagaacagcggtggtgtgagcctgaagc
cagaagaagtgggagagaatggtgcagcagggggaggggatgatggagaagaggaagacg
attaccaggtatactatctgaatccacaagaagtagccaaggaagatgatgacaaagctg
aagggggaaatgaagaggagcaggatatatttgccggtataaagcctctggagcaggaga
accggatggagatcctgtttgcctgtgcagaggccctgtatgcacatggatacagtaatg
aagcatgccgcttaaccgtagaactcgccagggacctactggccaaccctccagatctca
aagtggagcagccaccaactaagggcaaaaagaacaaggtttcaaccagcaagcagactt
ggatggcaaccaacacattgtctaaagctgctttcatgctgactgtgttgagtgagcggc
tggagtatcacaacctggccttcaggataggaatgtttgctctggagctgcagagaccac
ctgcctctacaaaggctctggaggtgaagctggcgtatcaggagtctgagattgtagccc
tcttgaagaagattcccttgggcactaacgagatgaacactattcgaggaagagctgaag
aactgcgagaagggactttatgtgattaccgtcctgtcctgcctctgatgttggctagct
ttatatttgatgtcctgtgcactccagtggtttctcctacaggctctagacccccaagcc
gtaattggaataatgaaatgcctggagatgaagagcttggctttgaggcagctgttgctg
ctcttggcatgaaaacaactgtcagtgaagcagaacatcctctgttgtgtgaaggcactc
gaagggagaaaggggatctggcactagcactgatgattacttacaaggatgatcagtcta
agctgaagaagattttagataaacttctggacagggagagtcaaactcacaaaccacaga
ctctgagttctttctactcatccagcaagcctacagtagcaaatcaaaaatctccttcca
aacacgctgcccagtccactgcagcaatccagcagcttccaggaacttctgtcactcagc
aagctgctttaagtactgcagtccagagcagtcctgagaactttgtggagaagagtgcac
aggagagctctcagaggtccccctgtgagccagctgcagaggccactatcttgaaacaag
agggaaaggttcccagtcgtctggcccttggaaaccgaggtggatacaatgggagatgct
ggggttcgcctgtcaggcagaagaagaaacacacaggcatggctagtattgacagcagcg
ctcctgaaaccacctctgacagttctccaacgctaagtcgacgtccgctacgtgggggat
gggcaacaacatcctggggcagaggacaggacagtgacagcatcagcagttcttcaagtg
attcgctgggatcttcctcttccagtggcagtaggagagccagtgggggagcccgtgcaa
agactgtggaagttggcaggtataaagggaggcggctggagagccacgctcctcatgtcc
caaaccagccctcagaggcagctgctcacttctactttgaattggccaagacagtcctta
ttaaagcaggtggaaacagcagtacctccattttcacccacccttcctccagtggtgggc
accagggaccacaccgcaaccttcacctctgcgccttcgagattgggctgtatgcactag
ggctgcacaactttgtgtctcccaactggctctctcgaacttactcctcccatgtctctt
ggatcacagggcaggccatggagattggtagcgcagccttgaacatcttggtggagtgtt
gggatggacatctgactcccccagaggtggcatcattggcagacagagcttcacgggcca
gagactccaacatggtgcgggcagctgctgaactggcactgagctgcctgccacatgccc
atgccctgaacccaaatgagatccagagggctctggtgcagtgtaaggaacaggacaatc
tcatgctggaaaaggcctgcatggcagtagaagaggcagccaaaggaggtggcgtgtacc
cagaagtcctctttgaagtagctcaccagtggtactggctttatgaacagactgtaggtg
ggaccccagcccagagagaaggtgccactggctgcagtgccagtggtgcccgggctgcct
cagaagcagcactcatgccggtgatctctgtggggtcgaccatgtaccagcagcatacaa
tggcagggccagcaatggcacatacgcacacgcagggcctccacccttacaccacccttc
agactcacatcccctgtaatccccagtatattggacacactattcagcacatgccgcgcc
cagctgtcttcccggtgcctggctcagcgtacccgcagggtgtccacccagcattcatag
gagcgcagtacccttattcggtaacaacaccatcattggcagctacagcagtgtcattcc
ctggtgtgccggtcccatccatgacgcagattgcggtgcatccctatcacagtgagacag
gactgtcactgtcttccaatgtagcgataggaagtgtccatgcaggatcaacgttcccag
cgattcagggggcttccttgacaactctgtcctcacagcccaactcccttgttacagggg
gttttcctgccgaggatgagcagcacagtcagcctgtgagcccccagggtctgcactacc
tccactccgcataccgagttgggatgctggctctggagatgcttggccgaagagctcaca
acgaccatcccaacaacttctcccgcagcccaccctacacggaggatgtaaaatggctcc
ttgggttagctgcgaagttaggtgtaaactatgtgcatcaattttgcgttggtgcagcca
agggtgtgctgagcccttttgtgctccaggagatcatcatggaagctctacagaggctca
accctgcccacgtgcacaaccacctgcgtaccccagccttccaccagctggtgcagaggt
gccagcaggcctacatgcagcaaataccttaaggctctttccnnnnnnnnnnnnnnntga
tccatctcactccagctgactacgatgactttgtgaatgccatccgcagcgccagaagcg
ccttctgcctgactcccatgggcatgatgcagtttaatgatattctccagaacctaaagc
gcagcaagcagacaaaggagctgtggcaaagggtctctctggaaatgacgaccttctcgc
cgtga
DBGET
integrated database retrieval system
