Gavia stellata (red-throated loon): 104260036
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Entry
104260036 CDS
T08384
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104260036 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104260036 (EXOSC7)
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104260036 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
104260036 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104260036
NCBI-ProteinID:
XP_009813909
UniProt:
A0A093FQE8
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
EDLRVDGRGCEDYRCAEVETDVVSNTSGSARVKLGHTDILVGVKAEMGTPKLEKPDEGYL
EFFVDCSANATPEFEGRGGEELGTEIANTLYRVFSSESSVDLKSLCINPREHCWVLYVDV
LLLECGGNLFDAISIAVKAALFNTRIPKVRVLEDEEGSKEIELSDDPYDCIRLNVNDVPC
IVTLSKIGYRHVVDATLQEEACSLASLLISVTSKGALTSMKKVGKGSLDPESIFEMMETG
KRVGKSLHIALQKILDEEESLGTSRQKVGFLG
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gaggaccttcgtgtagatggtcgtggctgtgaagactacagatgcgcagaagtagaaaca
gatgttgtatcaaacacaagcggatctgcaagagtaaagctgggacacactgatatcttg
gtaggtgtaaaagctgaaatggggacaccaaagttggagaaaccagatgaaggttacctg
gaattctttgttgactgttctgcaaatgctactcctgaatttgaaggccggggaggagaa
gaacttggcacagagatagcaaatacactctacagagtatttagcagtgagagcagtgta
gacttgaaatcactttgtattaatcccagagagcactgctgggttctctatgttgatgta
ttgttactggaatgtggtgggaacctctttgatgcaatctctatcgcagtgaaggcagct
ctctttaacacaagaatacccaaagtgcgtgttctggaggatgaagaaggctctaaagag
attgagctgtctgatgacccttatgattgtattcgactcaacgtgaatgatgtgccctgc
atagtcacactaagcaaaattggatacaggcatgtggtggatgctacccttcaggaagaa
gcctgttctttggccagcctgcttatttctgtgaccagtaaaggtgctctcacttctatg
aagaaagtggggaaaggtagccttgatcctgagagtatttttgaaatgatggagacggga
aaaagagtaggcaagtcattgcacatagcccttcagaagattttggatgaagaagagagt
ttggggacctcacgacagaaagttggatttctaggatga
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