Gavia stellata (red-throated loon): 104260346
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Entry
104260346 CDS
T08384
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04150
mTOR signaling pathway
gste04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104260346
04150 mTOR signaling pathway
104260346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gste04131
]
104260346
Membrane trafficking [BR:
gste04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
104260346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
EGF_LRP2
SGL
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
104260346
NCBI-ProteinID:
XP_009814352
LinkDB
All DBs
Position
Unknown
AA seq
1461 aa
AA seq
DB search
MYWTDWGEVPKIERAGMDGSSRAVIVNTDIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL
DGSHRQAVVKGSLPHPFALTLFGDTLYWTDWNTHSILACSKYSGEDLREIHSNIFSPMDI
HAFSQKRQPNATNPCGINNGGCSHLCLMSPTKPSYQCACPTGVKLLENGKTCKDGATELL
LLARRTDLRRISLDTPDFTDIVLPLEDIRHAIAIDFDPLEGYIYWTDDEVRAIRRSFIDG
SGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAI
VLDPMVGYMYWTDWGEIPKIERAALDGSDRIVLVNTSLGWPNGLALDYAESKIYWGDAKT
DKIEVMNADGTGRRVLVEDKLPHIFGFTLLGDYVYWTDWQRRSIERVHKRTAEREIIIDQ
LPDLMGLKATNVHQIIGTNPCAEDNGGCSHLCLYRPQGLRCACPIGLELINDMKTCIVPE
AFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFM
NGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPR
ALALDPAEGFMYWTEWGGKPKIDRAAMDGTERTTLVPNVGRANGLTIDYAKRRLYWTDLD
TNLIESSNMLGLDREIIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQG
HLDYVMDILVFHSSRQAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNSDNRTCSA
PTTFLLFSQKNAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNIIRK
AQEDGSQSLTVVTSPVPNQNLDMQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRPMGVV
LKGDQDRPRAIVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALAIDS
QLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDRQQQMIEKID
MTGREGRTKVQARIAQLSDIHAVKELNIQEYRQHPCSQDNGGCSHICIVKGDGTTRCSCP
VHLVLLQDELSCGEPPTCSPQQFTCFTGEIDCIPVAWRCDGFTECEDHSDEKNCPVCSDT
QFQCESGQCIDSALRCNGEANCQDNSDEKNCEVLCLTDQFRCASGQCIGKSKKCDHNLDC
SDSSDEQGCYTTEEPAPQPNNTIGSIIGVILTVFVVGAMYFICQRVLCPRMKGDGETMTN
DYVVHGPASVPLGYVPHPSSLSGSLPGMSRGKSVISSLSIMGGSSGPPYDRAHVTGASSS
SSSSTKGTYFPPILNPPPSPATERSHYTMEFGYSSNSPSTHRSYSYRPYSYRHFAPPTTP
CSTDVCDSDYAPSRRVTAATAKGYTSDLNYDSEPVPPPPTPRSQYLSAEENYESCPPSPY
TERSYSHHLYPPPPSPCTDSS
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgtattggacagactggggagaagtgccaaagatagaacgtgctgggatggatggttca
agccgcgctgttatagtcaacacggacatatattggccaaatggactgacgttggattat
gaggaacagaaactttattgggcagatgctaaactgaatttcatccacaaatcaaatctg
gatggaagtcataggcaagcagtggttaaaggctcccttccacatccttttgctttgacg
ctgtttggggacacgttgtactggactgactggaacacgcattcgatcttggcctgcagc
aagtactccggggaggacctgcgtgaaatacattccaacatcttctctcccatggatatc
catgctttcagccaaaagaggcagccaaatgctacaaacccatgtggaattaataatggt
ggctgctcccacttgtgtttgatgtctcctaccaagccctcttatcagtgtgcatgtccc
actggtgtgaaacttcttgagaatggaaagacctgcaaagatggtgccactgaactgctg
cttctagcccgccggacagatttgaggcgaatttccttagacaccccagattttacagac
attgttttgccactggaggacatccgtcatgccatcgccattgactttgatcctctagaa
gggtacatctattggactgatgatgaagttagggccatccgccgctcgttcatcgatggg
tcaggtagtcagtttgttgtcacagcacagatcgcacatcctgatggcattgctgttgac
tgggttgcccgaaatctgtattggactgacactggcacagaccgtattgaagttacaagg
cttaatgggaccatgagaaaaatcttgatatcagaagacctggaagaacccagagctatt
gtgctggatcccatggttgggtacatgtactggactgactggggagaaatcccaaagatc
gagagggcagcattagatggctcagacagaattgtgctggtgaatacctcgcttggctgg
ccaaatggattggcactggattatgcagaaagcaaaatatactggggagatgccaaaacg
gacaaaatagaggtcatgaatgctgatggaaccgggagaagagttctggtggaggacaag
ctgcctcatatctttggattcactttgttgggagactacgtttattggacagactggcaa
agacgcagtattgaacgtgtgcataagcgaacagcagaaagagagatcatcatagatcaa
ctgcctgatctaatgggcctgaaagctacaaacgtccaccagataattggtacaaaccct
tgcgcagaggataacggcggctgcagccatctctgtctgtacagaccacaaggccttcgc
tgcgcttgccccataggcttagagctcatcaatgacatgaagacctgcatcgtcccagaa
gctttcctgctcttttctcggagagcagatatcagacgaatctctttagaaacgaacaac
aacaacgttgctattccgctcaccggagtcaaggaagcttctgctctggattttgatgtg
acagacaatcggatttactggactgatatttcactgaagaccatcagcagagcatttatg
aatggcagcgcactggaacacgttgtggagtttggcttggattacccagaaggcatggcc
gtagattggttggggaagaacttgtattgggctgataccggaacaaatcgtatagaagtg
tcaaagctggacggacagcatcgccaagtgctggtgtggaaagatctcgacagtccccgg
gcgttggcgttggaccctgctgaggggtttatgtactggaccgaatggggtggtaagcca
aagattgatagagctgctatggacggcactgagcggactactttggtaccgaacgtggga
cgtgctaatggcctaactattgattatgctaaaagacggctatactggaccgacctcgat
accaacctgatagaatcctccaacatgctaggccttgaccgtgagattatagcggatgac
ttgcctcacccgttcggcttgactcagtatcaggattacatttactggacagactggagc
cggcggagcatcgaacgagccaacaagaccagtggccagaaccgaactatcatccaagga
catttggattacgttatggacatcttggtcttccattcctccaggcaggctggctggaac
gagtgtgcctccagcaacggtcactgctctcacctctgcttagcagtccctgttggtggt
tttgtctgtggctgcccagctcactattccttgaactctgacaacaggacttgtagcgct
cctacaaccttcctgttgttcagtcagaagaatgcaattaatcgcatggtgatagatgag
cagcagagtccagatatcatactccctatccatagtctcaggaacgttcgagccatcgat
tatgaccccctggataagcagctgtactggattgattctcggcagaacatcatccggaag
gcacaggaagacggcagccagagcctcactgttgtgacaagtccagttcccaatcagaac
ctagatatgcagccttatgacctgagcattgacatctacagccgctatatctactggacc
tgcgaagctaccaatgtgatcaatgtgacacgcctggatgggagacccatgggagtggtg
ctcaaaggagatcaagataggcccagggccattgtggtgaatccagagaaaggatacatg
tatttcaccaacctacaggaaaggtctcctaaaattgagagagcagcattggatggaact
gaacgagaggtcctctttttcagtggtttgagcaagcctatagccttagctattgacagc
cagctaggcaagttgttctgggctgattcagacctgcggagaattgaaagcagtgacctt
tcaggtgctaaccggattgttttggaagactctaatatcttgcagcctgtgggactaact
gtatttgaaaactggctgtattggattgacaggcaacagcagatgattgaaaagattgat
atgactggtcgagaaggacgtacaaaggtccaagctcgtattgcacaactcagtgacatc
catgctgtgaaagagctcaacattcaggaatacagacaacatccttgttctcaagacaat
ggtggctgctcgcacatttgcatcgtgaagggcgacggcaccacgcgctgttcttgccca
gtccaccttgttctgctgcaggatgagctgtcgtgcggagaaccaccaacatgctcccct
cagcagttcacctgtttcacaggtgagattgactgcatcccggtggcctggcgctgcgat
ggtttcactgaatgtgaagaccacagtgacgaaaagaactgcccggtgtgctcggacacg
cagttccagtgtgaaagtggacagtgcatagacagtgccctccggtgcaatggagaagca
aattgccaggacaactcggatgagaagaactgcgaagtgctttgtttaactgatcagttc
cgctgtgccagtgggcagtgcattgggaaaagcaagaaatgtgatcacaacctggactgc
agtgacagctcagatgagcaaggatgctacacaacggaggagcctgcgccacagcccaac
aacacaataggctccatcattggtgtcatccttacagtttttgtggttggagcaatgtac
ttcatctgccagagggtgctgtgcccacgcatgaagggagatggggaaacaatgaccaac
gattacgtggtgcacggaccagcttctgtacctcttggttacgtgcctcacccaagctct
ttgtcagggtctcttcctgggatgtctcgaggtaaatctgtgatcagctccctcagcatt
atgggggggagcagcgggccaccctatgacagagcccatgtcactggagcctcttccagt
agttcttcaagtaccaaaggcacttactttcctccaattttgaacccaccaccatcacca
gctactgaacgttcacattataccatggaattcggttattcctcaaacagcccatccact
catagatcctacagctacaggccttacagctaccggcattttgcacctcccaccacgccc
tgcagcacggatgtctgcgacagtgactatgcccccagccgaagggtcacggcagcgacg
gccaagggctataccagtgacttgaactatgattcagagcccgtccctccgccacccact
ccacgcagccagtacctgtcggcggaggagaactacgaaagctgcccgccttccccgtac
acggaacggagctactcgcaccatctctacccaccgccgccgtccccctgcacggactct
tcatga
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