Gavia stellata (red-throated loon): 104260407
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Entry
104260407 CDS
T08384
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104260407 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gste03019
]
104260407 (DCP1B)
Messenger RNA biogenesis [BR:
gste03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104260407 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
104260407 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
104260407
NCBI-ProteinID:
XP_009814422
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
EKTDVEGTLFVYTRSASPRHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIY
GIWFYDKEECQRIAELMKNLTQQXXXXXXXXXXXQQGTGTGVSPMIVNSANNKEVDILRM
LTKAKDEYTKCKTCSEPKQITSSSAIYNNPNLIKPIPVKPSENQHPRISQQSKNVEPEPQ
HLSLTALFGRQEKPDVSEPLNKQHQENLPVRQGVVRSLSYEEPSRHSPSAEKQLCPAIQK
LMVRGTDLHPLAEFPENRLCENGNIHPVGETFTGLFQPVTSHGIATSHGVQDTAGTQSLL
QKLQGQSGSVTKMDPSATGSVNSTASVFNRTPAAVGAPAAPVNNVSQPPLVYFNGSLPGQ
TLESQTLGKEQSKLPRQPLSLSGNQATNSGVISPQELLKKLQIVQQEQQLHVSSRPTLAA
KFPVVTQNTNTLKPLDSWIEKPPGTEKQSSLLQVISPQRIPLLMSPMVFTQSTPAPPKAN
ETGRLTAANQEPAASSSSLLLPLQTPEPSVVNSSPVTKMQLQETLLHLIQNDDNFLNIIY
EAYLFSVRKAAMKKSM
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
gagaagactgacgtggagggaacgctgtttgtttacacaagatcggcttctccaaggcat
ggcttcacaattatgaacagactgagcatggaaaatcgaacagaacctattactaaagac
ctcgatttccagctgcaggacccttttctactgtacagaaatgccagattgtccatatat
gggatttggttttatgataaggaagaatgccaaagaattgcagagctcatgaaaaaccta
actcagcaggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnncagcagggcacgggaaca
ggagtgtccccaatgatcgtgaattctgctaataacaaagaagtggatatcttacggatg
cttaccaaagccaaagatgagtataccaagtgtaagacctgctcagagccaaaacaaata
accagttcctctgcaatctataacaaccccaacctaatcaaaccaattccggtgaagcct
agtgaaaatcagcatccacgaatatctcagcaaagcaagaatgtggaacctgaaccacag
cacttgtctctgacagcactgtttggaagacaagaaaagccagatgtctcagaacccctt
aataaacagcatcaagaaaatcttcctgttaggcagggtgtggtacgttcactgtcctat
gaagaacctagcaggcattcaccctctgcagagaaacagctttgccccgccattcagaag
cttatggtgcgtgggacagaccttcatccgcttgctgagtttcctgaaaaccgactctgt
gaaaatggcaatatccaccctgtgggtgagactttcacaggactcttccaacctgtgact
tctcatggtattgcaacatctcatggagttcaggatactgctggcactcagagcttatta
cagaaattacagggtcagtcagggtccgtgactaaaatggaccccagtgcaacaggatct
gtgaactcgacagcttctgtgttcaacaggactcctgctgctgttggggcaccagcagca
ccggtaaacaatgtgagccagccacctttggtttatttcaatggctccctaccaggccag
actttagagtctcagacacttggtaaagaacaatccaaacttcctagacagccactttct
ctctctggcaatcaagccaccaattctggggtaatttcacctcaagagttactgaaaaaa
ctccagatagtgcaacaagaacagcagttgcatgtatccagcagaccaaccttggcagct
aagtttcctgttgttactcagaataccaatacactgaaaccactggattcctggatagaa
aagccaccgggtacagaaaaacagagctctctccttcaggtaatctcacctcaacgcatt
cccttgttgatgtccccaatggtgttcactcagtccacacctgctccaccaaaagcaaat
gaaactgggcggttaacagcagcaaaccaagaacctgctgctagctcatctagccttctc
ctgccactgcaaaccccagagccatctgtggtcaacagcagcccagtgacgaagatgcag
ttgcaggaaactcttctacacctgatccagaatgatgacaacttcttaaatattatttat
gaagcatatctcttcagtgtgagaaaggccgcaatgaaaaagtctatgtga
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