Gavia stellata (red-throated loon): 104260550
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Entry
104260550 CDS
T08384
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
gste
Gavia stellata (red-throated loon)
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gste04121
]
104260550 (PDZRN3)
Enzymes [BR:
gste01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104260550 (PDZRN3)
Ubiquitin system [BR:
gste04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
104260550 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
104260550
NCBI-ProteinID:
XP_009814607
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MGCSLCTLQKQEEQYKLLYEVCQVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRTPRTK
VFTPHESQLVDVGTQTDITFEHIMALSKMGSPTPPVSVLDPYLLPEDCYILHPSVHEYYD
PNDYMGGIHQEMDRDELELEEVDLHRVNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSIA
AKDGRLREGDRIIQINGIEVQNREEAVALLTSEESKNISLLVARPEIQLDEGWMDDDRND
FLDDLHMDMLEEQHHQAMQFTASMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDST
RNDESSEQENNVDDHTTSSNTLGSQKKLTYSHDTLGSGDMQFSNESFISADCTDVDFLGI
PVDECERFRELLELKCQVKSANPYSLYYHNSTLDMSKSDQESVDRELEMLNEELRNIELE
CLNIVRAHKMQQLKDQYREPWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAY
NTGESCRSTPLTLEISPDNSLRRTAEGINCQGNEGAVAYNVSQKNLFASSESHESSTGKC
HASAKDPDLGKQLESKERKASDGSKSPTHGQKPSGSYVSPYHHSPYKHAHIPAHAQHYQS
YMQLIQQKSAVEYAQSQMSLVSMCKDFNSSQSEPRMEWKVKVRSDGTRYITKRPVRDRLL
RERAIKIKEERSGMTTDDDAISEMMRKQHLVKAKEQRRRREFMMQSRLDCLKEQQGAEEK
KEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagtttgtgcactctacagaagcaagaagaacagtacaagttgctgtatgaa
gtttgtcaggtcaatgggaaggatttatctaaagcaacacatgagcaggcagtggaagcg
ttcaaaacggccaaggagcccattgtggtgcaggtcctgagaagaactccacgcaccaag
gtcttcactcctcacgagtctcagctggtagatgtgggcacacagacagatatcactttt
gaacacatcatggctctaagcaagatgggctcacctactccacccgtctctgtgctagac
ccatacctcctacctgaagactgctacattctccatccatctgtgcatgaatactatgac
ccaaatgactacatgggaggaattcatcaagaaatggaccgagatgagttagaattagag
gaagtagatttacatagagtgaacagccaggacaagcttggccttactgtatgttacaga
acggatgatgaagatgacatgggtatttatgtgagtgagattgatcccaacagtattgct
gcgaaagacggtcgactccgagaaggggatcgcattattcagatcaatggcatagaggta
cagaaccgagaagaagctgtggcacttctcaccagtgaagagagcaagaatatctcctta
cttgttgcgagaccagaaattcagctggatgaaggatggatggatgatgacagaaatgat
tttctggatgacttgcacatggacatgttagaggaacagcaccaccaggcaatgcaattt
actgccagcatgcttcagcagaagaagcatgaggaggatggaggtaccacagatacagcc
actattttatctaaccagcacgagaaggacagtggcgtagggcgcacagatgacagcact
cgcaacgatgagagctccgagcaggaaaacaacgtggatgatcacaccacctcctccaac
actttagggagccagaagaagctgacatacagtcatgacaccctaggaagtggcgatatg
cagttcagcaatgaatcatttatctcggccgactgcacagacgtcgacttccttggcatc
cctgtagacgaatgcgagcgattccgggaactgctggaactgaagtgccaggtgaagtct
gccaacccttacagtctatattatcataacagcacgctggatatgagcaaaagtgaccaa
gaaagtgttgacagagagctggagatgttgaacgaggagctgcgcaatatcgagctagag
tgcctgaatattgtgagagctcataaaatgcagcagctgaaagatcagtaccgggagccc
tggatgctacataacagtgggttccgcaactataacacgagcatcgatgttcgcaggcac
gagctctcagacattacagagctccccgagaagtctgacaaggatagctcgagtgcatat
aacacaggcgaaagctgccgaagcacaccactcacgctggagatttcccctgacaattcg
ctgcgcagaactgcagaaggcattaactgtcaaggtaacgagggggcagtggcatataac
gtctcccaaaagaatttatttgctagctcagaaagtcatgaatccagcactggcaaatgc
catgcctctgctaaagatcccgaccttggcaagcagctggaaagcaaggagagaaaagcc
agtgatggaagcaaaagtcctactcatggtcaaaaaccttctggctcctatgtctccccg
taccatcactctccatataaacacgctcatattcctgcccacgcacagcactatcagagc
tacatgcagctgatccaacagaagtcagcggtggagtatgcacagagccaaatgagtctg
gtgagtatgtgcaaagactttaattcaagccagagtgaaccaaggatggagtggaaagtc
aaggtcagaagcgatgggacccgctacattacaaagaggccagtcagggacaggctgctg
agagaacgtgccataaagattaaggaggagcgcagtggcatgactaccgatgacgatgcc
ataagtgaaatgatgcggaagcagcatttagtgaaagcgaaggagcagaggaggaggcgt
gagtttatgatgcagagcaggttagattgtttaaaggaacagcagggtgcagaagaaaag
aaggagatgaatatcattgaactgagccacaaaaaaatgatgaagaagagaaataaaaaa
atatttgacaattggatgacaatccaagaactgctaacccatggaacaaagtcaccagac
ggcacacgggtgtacaattccttcctgtcagtgactactgtataa
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integrated database retrieval system
