Gavia stellata (red-throated loon): 104260867
Help
Entry
104260867 CDS
T08384
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104260867 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gste04121
]
104260867 (TRIP12)
Enzymes [BR:
gste01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104260867 (TRIP12)
Ubiquitin system [BR:
gste04121
]
Ubiquitin ligases (E3)
HECT type E3
104260867 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
104260867
NCBI-ProteinID:
XP_009815016
LinkDB
All DBs
Position
Unknown
AA seq
1724 aa
AA seq
DB search
LRKSTKKRSESPPAELPSLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDN
NQDGVNSSAARTDDAPQGAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHL
FGPLGPRMSQLFHRTIGSGASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGG
FPVKSVVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQC
IDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPD
EFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQL
LVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQID
LVPRSPQELYELTSLICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPY
NRIDSRIIEAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNT
SGHSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYF
ADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMH
QVKNLAESEALLTSPPKVCTNGSGTLGTTTTISTGTATAASNAAADLGSPSLQHSREDSL
DLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPK
TWGRLSTQSNSNNIEPARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSE
NMDGSNPALNVLQRLCTATEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLL
LYLTSKSEKDAVSRDIRLKRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQ
MEQFPVKVHDFPSGNGTGSSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVK
IDPLALVQAVSFSSLASGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYI
GDHLLPYNMTVYQAVRQYSLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGN
KDCVGGKRGRAQTAPTKTSPRNSKKHDELWHDGVCPSVLNPLEVYLISTPPENITFEDPS
LDVILLLRVLHAISRYWYYLYDNAICKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIP
TWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDR
KKRTVNRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLG
LWRGEEVTLANPKGSQEGTKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAI
MDFRLVDLPLGLPFYKWMLRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQ
TKESLQYALEALTMNGCSVEDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFW
ALNEGVARQFDSFRDGFESVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHG
YTHDSRAVKYLFEILSSFDSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTEN
PDDFLPSVMTCVNYLKLPDYSTIEIMREKLLIAAREGQQSFHLS
NT seq
5177 nt
NT seq
+upstream
nt +downstream
nt
gtctaagaaaatctacgaagaagcgcagtgaatcaccacctgctgagctccccagtttgc
ggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggctctg
gcctgggcaaaagaggagcagctgaagctcgccggcaggagaagatggctgatcctgaca
acaaccaggatggtgttaactcttcagctgcacgtacagatgacgctccccagggagctg
cagcttctagttctgttgctggggctgtaggtatgacaacctctggagaaagtgagtcag
atgattctgagatgggaagactacaagctctattagaggctaggggtcttcctcctcacc
tgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagtggag
ctagttctaaagcccaacagcttttacaaggtctgcaagccactgatgaaagtcagcaac
tacaggcagtgattgagatgtgccagctgttagtcatgggaaatgaagaaacattaggag
gatttccagtcaagagtgttgtaccagctttgataacgctgctgcagatggagcacaact
ttgacattatgaatcatgcatgtcgggccttaacatatatgatggaagcacttcccagat
catctgccgtagtggtagatgcaattcctgtcttcttggaaaagctgcaagttattcagt
gcattgatgtggcagagcaggcacttacagccctggagatgttgtcacgcaggcatagta
aagccattctgcaggcaggtgggttggcagactgtttgctgtatctggaattcttcagta
taaatgcacagaggaatgcactagctattgctgcgaactgctgccagagtataacacctg
atgagtttcactttgtggcagactctttgccactgcttacacaaaggttaacccatcagg
acaaaaagtctgttgaaagcacttgtctctgttttgcacggctagtggacaacttccagc
atgaggagaacttgctccagcaggttgcttccaaggacttgttaacaaatatccagcaac
tcttggtagtgacgcctcctatcctgagctcaggaatgttcatcatggtggtgcgcatgt
tttccttaatgtgctccaattgtcctacacttgcggtccaacttatgaagcaaaatattg
cagaaacgcttcacttcctcctttgtggagcctcaaatgggagttgtcaagaacaaattg
accttgttccacgaagtcctcaagaactttatgaacttacttctcttatctgtgaactga
tgccttgcctgccaaaagagggaatctttgctgttgatactatgctaaagaaaggaaatg
cgcaaaatacagatggtgcaatatggcaatggcgagatgacaggggtctctggcatccct
ataacaggattgatagtcgaataatagaggcagctcatcaggttggtgaggatgagataa
gcctgtctacacttgggcgtgtctatactattgattttaactctatgcagcaaataaatg
aggatactggaacagcacgtgccattcagcgaaaaccaaaccctttagccaatacaaaca
ctagtggacattcagaattgaagaaggatgatgctcgagcacaactaatgaaagaggacc
cagaactggcaaaatcctttatcaaaacattgtttggtgttctttatgaagtttatagtt
cttcagctggaccagctgttagacacaagtgccttagagcaattcttaggataatttatt
ttgctgatgctgaacttctgaaggatgtgctgaaaaaccacgctgtttcaagtcatatcg
cctccatgctgtcgagtcaagaccttaagatagtagttggagccctgcagatggcagaga
ttttaatgcaaaagttacctgacatttttagtgtttacttcagaagagaaggggtgatgc
accaagtgaaaaacttagcggagtcggaggctttgctaacaagcccaccaaaagtatgca
ctaatggatcaggaacgctgggtaccactacaacaataagtactggaacagctactgctg
ccagtaatgcagctgctgatttgggctctcccagcttacaacacagccgggaggattctt
tggatctgagcccacagggacgactgagtgatgttctaaagagaaaaagactgccaaaac
gagggccaaggagaccaaaatactctcctccaagagatgatgacaaagtagacaatcaag
ctaaaagccctacaactactcaatctcctaaatcttccttcttggcaagtttaaatccaa
aaacatggggaaggttaagcacacagtccaacagtaataatattgaaccagcacgaacag
caggagtaagtggtcttgcaagggctgcttccaaggatacaatttccaataacagagaaa
aaattaagggctggattaaggagcaagcccataaatttgtagaacgttactttagttctg
aaaacatggatggaagcaatcctgcactaaacgtattacagagactttgcactgcaactg
aacaactcaacctccaggtggatggtggaacagagtgccttgtagaaatccgtagcattg
tctcagagtctgatgtctcctcatttgaaatccagcatagtgggtttgttaaacaactgc
tgctttatttgacatctaaaagtgagaaagatgctgtaagcagggatatcagattgaaaa
gatttcttcatgtatttttttcttctccacttcctggagaagaaccccttggaagattag
agccattagaaaatgcacctttgttggcattagtccataaaatgaacaattgcctcagtc
agatggaacagtttcctgtcaaagtgcatgacttccctagtggaaatggaacagggagca
gtttttctcttaacagaggatcccaagctttaaaattcttcaatacacatcaattaaaat
gccaactgcaaagacatccagactgtgctaatgtgaaacagtggaaaggtggacctgtga
agattgatcccctggctttggtacaagcggtgtctttctcctctcttgcttcaggctatg
gaagagttagagaagatgatgaggatagtgatgatgatgggtcagatgaagaaatagatg
aatctttggccgctcaattcttaaattcagggaatgtgaggcatagactgcaattttaca
tcggagatcacttgctgccatacaatatgactgtatatcaagcagttaggcagtacagtt
tgcaagctgaggaggagagggagtctacagatgatgaaagcaacccattaggaagagctg
ggatttggacaaaaacgcataccatttggtacaaacctgtgcgagaggatgaagatggta
ataaggactgtgttggtggtaaaagaggaagagcacaaactgctcccacaaaaacctccc
ctagaaattctaaaaagcatgatgaattgtggcacgatggtgtctgcccttcagtattaa
atcctctagaagtttacctcatatctacgccacctgaaaacataacatttgaagatcctt
cattagatgttattcttcttttgagagttttacatgctatcagtcgatactggtattact
tgtatgataatgcaatctgcaaggagataattccaacctcagagttcatcaacagcaaac
tgacagcaaaagcaaacaggcagcttcaggatcctttggtaattatgacaggaaacatac
caacttggctgacagaacttggaaaaacatgcccatttttctttccatttgatacccgtc
aaatgctgttttatgtaactgcttttgatcgtgatcgagccatgcaaagactgctggata
ctaatccagaaatcaatcaatcagattctcaggatagcagagtggcaccgcgactggaca
ggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatgcagg
atctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggcacaggcc
taggccccacgctagagttctatgcacttgtatctcaggaactacagagagcagacttag
gcctttggaggggagaagaagtgacattagctaatccaaaaggaagccaggaaggtacca
agtacatccataatcttcaaggcctttttgcacttccttttggtagaacagccaagccag
ctcacatcgcaaaagttaaaatgaagttccgctttctggggaaactaatggccaaggcaa
tcatggattttagactggtggaccttcctcttggacttcctttttataaatggatgttac
gacaggaaacttccttgacatcgcatgacttgttcagcattgatccagtagtagccaaat
caatttatcaccttgaagatattgtaagacaaaagaaaagacttgaacaggacaaaacac
agaccaaagaaagtctacagtatgcattggaggctctgactatgaatggctgctcagtgg
aagatctagggctggacttcacacttcctgggtttcctaatatagaactgaaaaaagggg
gaaaagatacaccagtcaccatccacaatttagaggagtatctcagattggttatattct
gggcactaaatgaaggtgttgccagacagtttgactcattcagagatggatttgaatcag
tctttcccctcagtcatcttcagtacttctatcctgaggagttggagcagctcttgtgcg
gcagtaaaacggacacttgggatgcaaagactttaatggaatgttgcaggccagatcacg
gttatacacatgacagtcgagcagtgaagtatctctttgaaattctcagtagctttgata
gtgagcagcaaagactgttccttcagtttgtgacaggtagccccagactgcctgtaggag
gctttcgaagtttgaatcctccattgacaattgtacgcaagacatttgagtctacagaga
atccagatgatttcttgccctcagtaatgacttgtgtgaactatctcaaattgccggact
attcaactattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcagcagt
cattccatctttcctga
DBGET
integrated database retrieval system
