Gavia stellata (red-throated loon): 104261046
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Entry
104261046 CDS
T08384
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104261046 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gste03041
]
104261046 (DHX8)
Enzymes [BR:
gste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104261046 (DHX8)
Spliceosome [BR:
gste03041
]
Complex C
Other components
Step II factors
104261046 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
PRP38_assoc
Flavi_DEAD
AAA_16
T2SSE
PhoH
TsaE
Transformer
ABC_tran
Sigma54_activ_2
OB_RRP5_4th
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104261046
NCBI-ProteinID:
XP_009815263
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MRPPPKPSASKETVGKPKSEKEKLKELFPALCRPDNPNIRNMLDEDDVKVAADALKELEA
LMPSADRQSKQRSSDHRAKKKRKSRSHSRDRKRRHRSRSRSRSRTRDKNRGKSRYRSRSR
SQSPSRDRKDREKYIEKSNERWRDKHIDRPPPEEPSIGDIYNGKVTSIMQFGCFVQLEGL
RKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLN
PNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDSLERKRLTRISDPEKWEIKQMIA
ANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKN
PDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTHWVDPLPDVDGRQIAANMRG
IGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVI
GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR
FEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQK
RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQI
HLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDP
APPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQR
AGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMD
APPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLT
IVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFI
QARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTL
IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPT
KLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctccaccaaagccatctgcaagcaaagagacagttggcaaacccaaatcggag
aaggaaaagttgaaggaattgtttccagccctttgcaggccagacaatcccaacatcagg
aatatgctggatgaagatgatgtgaaagtggcagctgatgcacttaaagaacttgaagct
ctaatgcctagcgcagacaggcaaagcaagcaaaggagcagtgaccaccgggcaaagaaa
aagaggaagagccgaagtcatagcagggacaggaaacgaaggcacagatctcgctcaagg
tctcgttctaggactcgagataagaacaggggaaaatcaagataccggtcaaggagcaga
agtcagagtcccagtagggaccgcaaggatcgagagaagtacatcgagaagagcaatgag
agatggagagacaagcacatagaccgtccaccacctgaggagccttccattggagacatt
tacaatggcaaagtcacaagtataatgcaatttggatgctttgtgcagctggaaggacta
aggaagcgttgggagggcttggtccacatctcggagcttcgaagagaaggacgggttgca
aatgttgccgatgttgtgagcaaaggacaaagagtaaaagtcaaagtgttatcctttact
ggatctaaaaccagcctgagcatgaaggatgttgatcaagacactggggaagacttgaac
ccaaaccggaggagaaacctggttggtgaaaccaatgaagaaacctctatgagaaacccg
gacagacccagtcacctgtccctggtgaatgccccagaggtggaggatgacagccttgaa
cggaaacgcctcacccgaatttcagacccagagaaatgggaaataaaacagatgattgca
gctaatgtgctttccaaggaagagtttcctgactttgatgaggagactgggattcttcct
aaagttgatgatgaagaagatgaggaccttgagattgagttagttgaagaagagccaccg
ttccttcgaggtcatactaaacagagcatggatatgagtcccatcaaaatagtaaagaat
ccagatggttccttgtcccaggctgcaatgatgcagagtgctttagctaaagaaagacga
gaacttaaacaagcccagagagaagcagagatggattctatccccatgggactcaacaca
cactgggtggatcctctccctgatgtggatggaagacaaatagctgcaaacatgcgaggt
attgggatgatgcccaatgatataccagagtggaagaaacatgcatttggtggcaacaaa
gcttcttatggtaaaaagacccagctttccattattgagcagagagagagtctcccaatc
tttaggctgaaggagcagctgatacaagctgtgcatgacaaccagattctgattgttatt
ggagagacaggatctgggaaaacaacacagattacccaatacctggctgaggcggggtac
acatcaagaggaaagattggatgtactcagcctcgcagagtggctgcaatgtctgttgcg
aagagggtgtcagaggaatttggttgctgcttgggacaagaggttggctacaccattcga
tttgaagactgcactagccctgaaactgttatcaaatacatgacagatggtatgttactg
agggagtgcttgatagatcctgatctgactcagtatgccattatcatgctggatgaagcc
catgagaggaccatacatacagatgtgctctttggactcctgaagaagacagtgcagaaa
cggcaggatatgaagttgatagtgacatcagcaacactggatgctgtgaaattctctcag
tacttctatgaagcgccaatcttcacaatacctggcagaacatacccagtagaaattttg
tacacaaaagagccagagacagattatttggatgccagtctgattacagtaatgcagatc
cacttaacagagccaccaggtgacattttggtgtttctaactggtcaggaagagattgac
actgcctgtgaaatcctctatgagaggatgaaatctctaggacctgatgttccagagtta
attatcctaccagtatattcggctttacccagtgaaatgcaaaccaggatctttgaccca
gccccaccaggaagcagaaaggttgtcatcgccactaacattgctgagacatctttgact
attgatggaatatattatgtagttgatcctggctttgtgaagcagaaagtttataactcc
aagactggaattgaccagctggttgttacaccgatttcacaggctcaagcaaagcagcga
gcaggaagggctgggagaacaggaccaggaaaatgctataggttatatacagagcgtgct
tatcgagatgaaatgctaaccaccaatgtgcctgaaatccagagaactaatttggccagt
accgtactttccctgaaggctatgggcatcaatgatttgctctccttcgacttcatggat
gctcccccaatggaaactctcataactgccatggagcagctgtataccctgggagctctg
gatgatgagggactgctcactcgacttgggcgcaggatggcagaattccccttggagcct
atgttgtgtaagatgttgatcatgtctgtacatctgggatgcagtgaggaaatgttgaca
atagtctccatgctgtctgtacagaatgtgttctacaggccaaaggataaacaagcactt
gctgatcaaaagaaagccaagttccatcagacagaaggtgaccacctcactctgctggct
gtgtacaattcctggaagaataataagttttcaaatccctggtgctatgaaaattttatc
caggcccgatccttacgcagggcacaggacatccgcaagcagatgttgggcattatggac
aggcacaagctggatgtggtatcctgtgggaaggcaacagttcgagtccagaaggccatc
tgtagtggcttcttcagaaatgcagcgaagaaggatccccaggaaggttatcggacactc
attgatcaacaagtagtctacatccacccatccagtgctctattcaacaggcagccagaa
tgggtggtgtatcatgaactggtgctgaccaccaaggaatatatgcgtgaagtgacaact
attgatcctcgctggctggtggaatttgcaccagctttcttcaaggtttctgatccaacc
aagctcagcaaacagaaaaagcagcagcggctggaacccctgtacaatcgctatgaggag
cccaatgcttggaggatatcacgtgcattcagacggcgatga
DBGET
integrated database retrieval system
