Gavia stellata (red-throated loon): 104261078
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Entry
104261078 CDS
T08384
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104261078 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gste03400
]
104261078 (MSH2)
DNA repair and recombination proteins [BR:
gste03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104261078 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_IV
MutS_III
AAA_27
Motif
Other DBs
NCBI-GeneID:
104261078
NCBI-ProteinID:
XP_009815297
UniProt:
A0A093FMG3
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
VENHEFLVKASFDPNLTELREKMNELEEKMQSFLKSAAKELGLEAGKSIKLETNSQFGHH
FRITCKEEKVLRNNSKYGIVDTQKNGVKFTNSKLSSVNDEYIKNREEYEEAQDAIVKEII
NIASGYAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCI
EVQDEVAFIPNDITFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEI
TVVDCILARVGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGL
AWAISEYIASKICAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKEGVC
DQSFGIHVAELAAFPKHVIESAREKALELEEFQNIGKSKESDGEPPAKKFCREREEGEKI
IQDFLSQVKALPLTDMSEDDIKSKLKELRNDVLAKNNSFVNEIISRTKVTS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtggagaatcatgaatttcttgtcaaggcttcttttgatcctaatttgacagaattaaga
gagaagatgaatgaactggaagaaaaaatgcaatcctttttaaagagcgcagccaaagaa
ctaggtttggaagctggcaagagtatcaaactggagacaaattcacagttcggacatcac
tttcgaataacttgcaaggaggaaaaagttctccgtaacaattcaaaatatggaatagtt
gatacacagaagaatggtgtgaaatttactaacagcaaactgagctccgtcaatgatgaa
tatataaagaacagagaagagtatgaagaggctcaggatgcaattgttaaggaaatcatt
aacattgcttcaggttatgcagaaccaatacagacgatgaatgacgtgatagctcagctg
gatgcaattgtcagttttgctcatgtgtcaaacggagcgccagtgccatacgtccgtccg
gtcattctggaaaagggacagggaaggattgtgctgaaaggcgccaggcatccttgcatc
gaagtgcaagatgaggtggccttcatccccaatgacattacgtttgagaagggcaagcag
atgttccacattattactggtcctaacatggggggaaaatcaacctacatccgacagaca
ggggtgattgttcttatggcccaaattgggtgttttgtaccatgcgactctgcagaaata
actgttgtggattgtatcctggctcgggtgggagctggagacagtcagctgaaaggcgtg
tcaactttcatggctgaaatgttagaaactgcttcaatccttaggacagcatccgaaaac
tccctgataatcattgatgaactgggaagaggaacttctacctacgatggttttggctta
gcatgggcgatttcggaatacattgctagcaaaatctgtgctttctgtatgtttgctaca
cattttcatgaactgacagctcttgctgaccaagtgccaacagtaaataacctacatgtt
actgctctgaccagtgatgacacactgacgatgctttatcgtgtcaaggaaggtgtttgt
gaccagagttttggaatacatgtagcagagttggcggctttcccaaaacatgtgatagaa
agtgcaagagagaaagcattggagctggaggagtttcaaaacattggcaagtccaaggaa
tctgatggagaaccaccagccaagaaattctgcagagaaagagaggaaggtgaaaagata
attcaggattttctttctcaagtgaaagcattgcccctgacagatatgtcagaagacgac
atcaaaagcaagctgaaagagctgagaaatgatgtgttggcaaagaacaacagttttgtg
aatgaaataatttcccggacaaaagttacatcatga
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